iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023045

Ensembl Protein ID

ENSCSAP00000001669.1

UniProt Accession

A0A0D9QZ80; A0A0D9QZ80_CHLSB

Genbank Protein ID

ENSCSAP00000001669

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01042524

Gene Name

TAF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000005356.1	ENSCSAT00000003389.1	ENSCSAP00000001669.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-45	149.7	413	451
UBD/Beta-Prp	2.30e-88	296.2	261	582

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v+c +f ++ +++++Gs D t+++WD+  g++++
   Q: 413  GHLADVNCTRFhPNsNYVATGSADRTVRLWDVLNGNCVR 451
           89**********777*****************9999986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+sl+a g++d+t++vw+vt++kl                               l+ l+gh+++v+  +fspd+++l+++
   Q: 261  LTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLrsvkqasdlslidkesddvlerimdektaseLKILYGHSGPVYGASFSPDRNYLLSS 349
           799************************************************************************************** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+t+++w+l+t++c++ +kgh++ v++++fsp+g+++vsG+hdr++r+w ++++q l+ +++gh + vnc+++hp++n++++Gs+Dr
   Q: 350  SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADR 437
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ng++l++g++dg+v lwd+ +g +v +l+ghtd+v+s+rfs+++e+l+sgs+D+++r+
   Q: 438  TVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRL 525
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           W       dl+++d+++++ + n              +++++v +l+f++++lvl++
   Q: 526  WdaikafeDLETDDFTTATGHINlpensqelllgtymTKSTPVVHLHFTRRNLVLAA 582
           ****************************************************99986 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MYEEYYSGLK HFIECSLDCH RAELSQLFYP LFVHMYLELV YNQHENEAKS FFEKFHGDQE 60
CYYQDDLRVL SSLTKKEHMK GNETMLDFRT SKFVLRISRD SYQLLKRHLQ EKQNNQIWNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGGCGCT CCGCACGACC GACAGACTCT ACTGGCCGTG CTGCAGTTCC TACGGCAGAG 60
CAACCTCCGC GAGGCCGAAG AGGCGCTGCG CCGTGAGGCC CGGCTGCTGG AGGAGGCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0000790--C:nuclear chromatin
GO:0005669--C:transcription factor TFIID complex
GO:0033276--C:transcription factor TFTC complex
GO:0004402--F:histone acetyltransferase activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	51.93	4.00e-68	251.00
IUUC-Aml-001607	Ailuropoda melanoleuca	99.66	0.00e+00	1162.00
IUUC-Atr-003136	Amborella trichopoda	46.48	5.00e-95	342.00
IUUC-Apl-004193	Anas platyrhynchos	92.86	0.00e+00	1081.00
IUUC-Aca-004522	Anolis carolinensis	93.03	0.00e+00	1115.00
IUUC-Aly-006476	Arabidopsis lyrata	38.61	5.00e-110	391.00
IUUC-Ath-006587	Arabidopsis thaliana	38.23	4.00e-106	378.00
IUUC-Ago-007736	Ashbya gossypii	42.82	1.00e-92	334.00
IUUC-Acl-008092	Aspergillus clavatus	36.34	8.00e-78	285.00
IUUC-Afl-008659	Aspergillus flavus	36.60	3.00e-79	290.00
IUUC-Afu-008902	Aspergillus fumigatus	37.96	1.00e-79	291.00
IUUC-Ani-009462	Aspergillus nidulans	32.39	6.00e-81	295.00
IUUC-Aor-010083	Aspergillus oryzae	36.60	3.00e-79	289.00
IUUC-Ate-010271	Aspergillus terreus	37.76	2.00e-79	290.00
IUUC-Ame-010721	Astyanax mexicanus	88.10	0.00e+00	1052.00
IUUC-Bgr-012257	Blumeria graminis	29.65	3.00e-74	272.00
IUUC-Bta-013539	Bos taurus	99.49	0.00e+00	1162.00
IUUC-Bci-013737	Botrytis cinerea	28.98	8.00e-79	288.00
IUUC-Bdi-015041	Brachypodium distachyon	48.94	3.00e-83	303.00
IUUC-Bol-016198	Brassica oleracea	38.35	3.00e-108	385.00
IUUC-Bra-017660	Brassica rapa	37.96	2.00e-107	382.00
IUUC-Cel-018451	Caenorhabditis elegans	33.45	1.00e-86	313.00
IUUC-Cja-018881	Callithrix jacchus	100.00	0.00e+00	1162.00
IUUC-Cfa-020056	Canis familiaris	99.66	0.00e+00	1164.00
IUUC-Cpo-021454	Cavia porcellus	95.59	0.00e+00	1167.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	37.85	5.00e-52	198.00
IUUC-Cho-024284	Choloepus hoffmanni	85.47	0.00e+00	886.00
IUUC-Cin-025457	Ciona intestinalis	60.29	3.00e-99	354.00
IUUC-Csv-025882	Ciona savignyi	52.01	2.00e-173	602.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.87	7.00e-76	278.00
IUUC-Cne-026876	Cryptococcus neoformans	39.39	8.00e-73	268.00
IUUC-Cme-027302	Cyanidioschyzon merolae	34.58	7.00e-100	358.00
IUUC-Dre-027980	Danio rerio	86.56	0.00e+00	1025.00
IUUC-Dno-028863	Dasypus novemcinctus	99.66	0.00e+00	1163.00
IUUC-Dor-030561	Dipodomys ordii	100.00	0.00e+00	1162.00
IUUC-Dse-031547	Dothistroma septosporum	30.56	2.00e-78	286.00
IUUC-Dme-031917	Drosophila melanogaster	45.76	1.00e-144	506.00
IUUC-Ete-032319	Echinops telfairi	79.93	0.00e+00	873.00
IUUC-Eca-033927	Equus caballus	99.49	0.00e+00	1176.00
IUUC-Eeu-034449	Erinaceus europaeus	99.19	0.00e+00	957.00
IUUC-Fca-036325	Felis catus	99.66	0.00e+00	1161.00
IUUC-Fal-036604	Ficedula albicollis	94.58	0.00e+00	1114.00
IUUC-Fox-038049	Fusarium oxysporum	33.43	2.00e-49	190.00
IUUC-Gmo-038832	Gadus morhua	83.65	0.00e+00	971.00
IUUC-Ggr-039878	Gaeumannomyces graminis	29.09	3.00e-70	259.00
IUUC-Gga-041147	Gallus gallus	94.56	0.00e+00	1134.00
IUUC-Gac-041373	Gasterosteus aculeatus	87.56	0.00e+00	1010.00
IUUC-Gma-043230	Glycine max	38.67	4.00e-116	412.00
IUUC-Ggo-045526	Gorilla gorilla	100.00	0.00e+00	761.00
IUUC-Hsa-045971	Homo sapiens	100.00	0.00e+00	1164.00
IUUC-Hvu-047695	Hordeum vulgare	49.71	1.00e-86	313.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	99.83	0.00e+00	1163.00
IUUC-Kpa-049402	Komagataella pastoris	43.50	4.00e-94	339.00
IUUC-Lch-049526	Latimeria chalumnae	88.44	0.00e+00	1013.00
IUUC-Lpe-050793	Leersia perrieri	36.76	5.00e-86	311.00
IUUC-Loc-052882	Lepisosteus oculatus	91.31	0.00e+00	1076.00
IUUC-Lma-053212	Leptosphaeria maculans	31.00	1.00e-79	291.00
IUUC-Laf-053859	Loxodonta africana	99.83	0.00e+00	1163.00
IUUC-Mcc-054957	Macaca mulatta	100.00	0.00e+00	992.00
IUUC-Meu-056766	Macropus eugenii	98.83	0.00e+00	634.00
IUUC-Mor-057024	Magnaporthe oryzae	29.91	9.00e-67	248.00
IUUC-Mpo-057520	Magnaporthe poae	29.43	2.00e-70	260.00
IUUC-Mtr-058754	Medicago truncatula	39.19	2.00e-118	419.00
IUUC-Mla-058881	Melampsora laricipopulina	38.21	5.00e-80	292.00
IUUC-Mga-059776	Meleagris gallopavo	94.73	0.00e+00	1134.00
IUUC-Mvi-060208	Microbotryum violaceum	41.75	1.00e-82	301.00
IUUC-Mmr-061783	Microcebus murinus	100.00	0.00e+00	992.00
IUUC-Mdo-062856	Monodelphis domestica	98.81	0.00e+00	1153.00
IUUC-Mmu-064218	Mus musculus	99.83	0.00e+00	1165.00
IUUC-Mac-064886	Musa acuminata	53.05	4.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	99.66	0.00e+00	1163.00
IUUC-Mlu-067544	Myotis lucifugus	99.49	0.00e+00	1153.00
IUUC-Nfi-068502	Neosartorya fischeri	37.96	5.00e-80	292.00
IUUC-Ncr-068891	Neurospora crassa	30.12	1.00e-73	271.00
IUUC-Nle-069389	Nomascus leucogenys	100.00	0.00e+00	1164.00
IUUC-Opr-071042	Ochotona princeps	87.94	0.00e+00	672.00
IUUC-Ont-071455	Oreochromis niloticus	88.59	0.00e+00	1023.00
IUUC-Oan-073181	Ornithorhynchus anatinus	95.41	0.00e+00	1121.00
IUUC-Ocu-073758	Oryctolagus cuniculus	98.98	0.00e+00	1167.00
IUUC-Oba-075739	Oryza barthii	44.89	2.00e-81	296.00
IUUC-Obr-076111	Oryza brachyantha	38.13	3.00e-111	395.00
IUUC-Ogl-077914	Oryza glaberrima	36.90	3.00e-98	352.00
IUUC-Ogu-078190	Oryza glumaepatula	35.19	6.00e-88	318.00
IUUC-Oin-079249	Oryza indica	37.82	8.00e-99	354.00
IUUC-Olo-080645	Oryza longistaminata	52.47	7.00e-69	254.00
IUUC-Ome-081831	Oryza meridionalis	42.20	2.00e-71	263.00
IUUC-Oni-082431	Oryza nivara	36.44	1.00e-96	347.00
IUUC-Opu-083325	Oryza punctata	35.53	1.00e-89	323.00
IUUC-Oru-085154	Oryza rufipogon	52.17	9.00e-81	294.00
IUUC-Osa-086189	Oryza sativa	37.79	4.00e-102	365.00
IUUC-Ola-086574	Oryzias latipes	89.42	0.00e+00	1045.00
IUUC-Olu-087616	Ostreococcus lucimarinus	33.44	4.00e-100	358.00
IUUC-Oga-088827	Otolemur garnettii	99.83	0.00e+00	1161.00
IUUC-Oar-089648	Ovis aries	99.49	0.00e+00	1163.00
IUUC-Ptr-091195	Pan troglodytes	100.00	0.00e+00	1165.00
IUUC-Pan-091978	Papio anubis	100.00	0.00e+00	1166.00
IUUC-Psi-093598	Pelodiscus sinensis	94.95	0.00e+00	1063.00
IUUC-Pno-094823	Phaeosphaeria nodorum	30.53	5.00e-83	301.00
IUUC-Ppa-095455	Physcomitrella patens	45.92	1.00e-95	343.00
IUUC-Pfo-097120	Poecilia formosa	88.93	0.00e+00	1018.00
IUUC-Pab-098771	Pongo abelii	100.00	0.00e+00	1164.00
IUUC-Pop-099542	Populus trichocarpa	37.62	1.00e-113	403.00
IUUC-Pca-100804	Procavia capensis	88.89	0.00e+00	928.00
IUUC-Ppe-101686	Prunus persica	38.04	5.00e-109	388.00
IUUC-Pva-102414	Pteropus vampyrus	93.88	0.00e+00	1068.00
IUUC-Pgr-103603	Puccinia graminis	37.00	6.00e-73	268.00
IUUC-Pte-104359	Pyrenophora teres	30.26	8.00e-82	298.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.95	2.00e-82	300.00
IUUC-Rno-105064	Rattus norvegicus	99.83	0.00e+00	1163.00
IUUC-Sce-106186	Saccharomyces cerevisiae	42.75	2.00e-90	327.00
IUUC-Sha-106582	Sarcophilus harrisii	98.64	0.00e+00	1147.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	38.09	5.00e-109	388.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.14	7.00e-106	377.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	28.14	2.00e-77	284.00
IUUC-Smo-109097	Selaginella moellendorffii	36.90	3.00e-108	385.00
IUUC-Sit-109804	Setaria italica	38.25	9.00e-105	374.00
IUUC-Sly-111693	Solanum lycopersicum	38.04	2.00e-108	386.00
IUUC-Sar-113412	Sorex araneus	98.49	0.00e+00	750.00
IUUC-Sbi-114849	Sorghum bicolor	37.42	3.00e-103	369.00
IUUC-Sre-114945	Sporisorium reilianum	35.37	1.00e-76	281.00
IUUC-Ssc-115582	Sus scrofa	80.41	0.00e+00	923.00
IUUC-Tgu-116899	Taeniopygia guttata	94.73	0.00e+00	1118.00
IUUC-Tru-118011	Takifugu rubripes	88.42	0.00e+00	1024.00
IUUC-Tsy-119262	Tarsius syrichta	75.10	1.00e-101	363.00
IUUC-Tni-120598	Tetraodon nigroviridis	88.62	0.00e+00	1017.00
IUUC-Tca-121247	Theobroma cacao	44.73	1.00e-94	340.00
IUUC-Tre-121949	Trichoderma reesei	36.34	1.00e-62	234.00
IUUC-Tvi-122626	Trichoderma virens	33.11	3.00e-64	239.00
IUUC-Tae-124804	Triticum aestivum	37.30	5.00e-96	345.00
IUUC-Tur-126005	Triticum urartu	45.17	2.00e-82	300.00
IUUC-Tme-126904	Tuber melanosporum	42.38	4.00e-91	329.00
IUUC-Tbe-127254	Tupaia belangeri	93.88	0.00e+00	1068.00
IUUC-Ttr-128544	Tursiops truncatus	99.66	0.00e+00	1161.00
IUUC-Uma-129379	Ustilago maydis	34.31	3.00e-76	280.00
IUUC-Vda-129761	Verticillium dahliae	33.67	2.00e-58	221.00
IUUC-Vpa-130485	Vicugna pacos	99.66	0.00e+00	1162.00
IUUC-Vvi-131171	Vitis vinifera	38.14	2.00e-114	406.00
IUUC-Xtr-132762	Xenopus tropicalis	80.20	0.00e+00	912.00
IUUC-Xma-133583	Xiphophorus maculatus	88.93	0.00e+00	1018.00
IUUC-Yli-134446	Yarrowia lipolytica	37.91	6.00e-116	411.00
IUUC-Zma-135722	Zea mays	33.71	5.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence