iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000044083.11	ENSMUST00000144827.1	ENSMUSP00000135811.1
ENSMUSG00000044083.11	ENSMUST00000126656.2	ENSMUSP00000135661.1
ENSMUSG00000044083.11	ENSMUST00000175856.1	ENSMUSP00000134797.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-19	70.3	99	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
           ++ c+++ +d ++l++G++D  i++W+
   Q: 99   GILCFDYcPDrNFLATGGYDPHIRLWN 125
           5889999*******************9 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

XSDNVAGGLF NPQILPRASK WDHWFTVSLK KLLNEKAPLY RSFRMKGLHP NWCQQVKYIP 60
QLNVVASCSA VEKSSLVLII LPGKEPEKPR LSSLNLRKGI LCFDYCPDRN FLATGGYDPH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTATTTCT AGATGAGTCG TCACAGCTTG CTTCATGCCC TCGTCCCTCC ATGCTCCTCT 60
TTCTGGAGAA GTTTCTGCCT TTTCTCTTAG TTGTCCTTAC TTTCGATGTC AAGACAGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-020006	Callithrix jacchus	74.71	4.00e-162	565.00
IUUC-Cfa-020765	Canis familiaris	75.94	8.00e-144	504.00
IUUC-Dno-029238	Dasypus novemcinctus	72.46	2.00e-154	540.00
IUUC-Ggo-044932	Gorilla gorilla	76.45	8.00e-166	578.00
IUUC-Hsa-046963	Homo sapiens	75.87	6.00e-164	572.00
IUUC-Lch-050281	Latimeria chalumnae	44.19	5.00e-79	288.00
IUUC-Loc-052029	Lepisosteus oculatus	43.70	5.00e-76	279.00
IUUC-Laf-054508	Loxodonta africana	73.10	2.00e-150	525.00
IUUC-Mcc-054635	Macaca mulatta	76.74	5.00e-167	582.00
IUUC-Mmr-061370	Microcebus murinus	73.18	6.00e-158	551.00
IUUC-Mdo-061862	Monodelphis domestica	55.49	1.00e-112	401.00
IUUC-Mpu-066224	Mustela putorius furo	70.14	1.00e-146	514.00
IUUC-Ocu-074664	Oryctolagus cuniculus	74.49	4.00e-158	552.00
IUUC-Oar-089288	Ovis aries	71.39	3.00e-154	540.00
IUUC-Psi-093985	Pelodiscus sinensis	52.02	5.00e-74	271.00
IUUC-Pfo-097353	Poecilia formosa	31.05	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence