iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093932

Ensembl Protein ID

ENSPSIP00000017559.1

UniProt Accession

K7GB98; K7GB98_PELSI

Genbank Protein ID

ENSPSIP00000017559

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01058422

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000015621.1	ENSPSIT00000017638.1	ENSPSIP00000017559.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-20	72.6	65	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++ af         + l++++s D t+ vW+  +g++++
   Q: 65   GHTHKITAItAFpssdackeKNYLILTASADRTVIVWECNSGKQVQ 110
           8*******9459*977775432569***************999987 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

KSSVQSLGEE QIQNPYTELL VLKGHHDIVR FLVKIDDYRF ASAGDDGIVF LWNAQTGEKL 60
FELHGHTHKI TAITAFPSSD ACKEKNYLIL TASADRTVIV WECNSGKQVQ KVSCFHSTVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGAAGTTG GCACCTGCGA TGGTACATAT GGCTAAAGAC TTAATTAGAG ATGAATTATG 60
TATATACAAA TTGAAGTACT CATGATTCAT TTCTCTTGAT GAATTTTTAG AAATCATCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	77.17	0.00e+00	714.00
IUUC-Apl-004087	Anas platyrhynchos	82.78	0.00e+00	701.00
IUUC-Aca-005359	Anolis carolinensis	78.13	0.00e+00	709.00
IUUC-Ame-010669	Astyanax mexicanus	41.76	4.00e-75	275.00
IUUC-Bta-013534	Bos taurus	74.89	0.00e+00	692.00
IUUC-Cja-019219	Callithrix jacchus	77.40	0.00e+00	693.00
IUUC-Cfa-020310	Canis familiaris	76.71	0.00e+00	713.00
IUUC-Cpo-021664	Cavia porcellus	74.66	0.00e+00	687.00
IUUC-Csa-024228	Chlorocebus sabaeus	78.31	0.00e+00	719.00
IUUC-Cho-024898	Choloepus hoffmanni	73.79	3.00e-91	328.00
IUUC-Dre-028538	Danio rerio	54.09	8.00e-124	436.00
IUUC-Dno-028861	Dasypus novemcinctus	75.57	0.00e+00	696.00
IUUC-Dor-030111	Dipodomys ordii	77.17	0.00e+00	708.00
IUUC-Ete-032444	Echinops telfairi	77.04	1.00e-137	482.00
IUUC-Eca-033676	Equus caballus	76.03	0.00e+00	694.00
IUUC-Eeu-034571	Erinaceus europaeus	67.35	2.00e-174	605.00
IUUC-Fca-035387	Felis catus	77.17	0.00e+00	710.00
IUUC-Fal-037310	Ficedula albicollis	82.88	0.00e+00	755.00
IUUC-Gmo-039224	Gadus morhua	51.15	5.00e-123	434.00
IUUC-Gga-040957	Gallus gallus	83.11	0.00e+00	758.00
IUUC-Gac-042385	Gasterosteus aculeatus	52.62	2.00e-129	455.00
IUUC-Ggo-044973	Gorilla gorilla	77.40	0.00e+00	711.00
IUUC-Hsa-046842	Homo sapiens	77.40	0.00e+00	711.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	77.67	8.00e-146	509.00
IUUC-Lch-049625	Latimeria chalumnae	62.56	7.00e-165	573.00
IUUC-Loc-052368	Lepisosteus oculatus	60.59	1.00e-150	525.00
IUUC-Laf-053678	Loxodonta africana	75.63	0.00e+00	691.00
IUUC-Mcc-055184	Macaca mulatta	77.85	0.00e+00	717.00
IUUC-Meu-056165	Macropus eugenii	72.37	0.00e+00	642.00
IUUC-Mga-060184	Meleagris gallopavo	82.80	3.00e-73	266.00
IUUC-Mmr-060965	Microcebus murinus	77.63	0.00e+00	706.00
IUUC-Mdo-062702	Monodelphis domestica	79.68	0.00e+00	730.00
IUUC-Mmu-063649	Mus musculus	70.85	2.00e-98	352.00
IUUC-Mpu-065747	Mustela putorius furo	75.34	0.00e+00	698.00
IUUC-Mlu-067873	Myotis lucifugus	77.40	0.00e+00	711.00
IUUC-Nle-069670	Nomascus leucogenys	77.63	0.00e+00	709.00
IUUC-Opr-070266	Ochotona princeps	70.78	0.00e+00	637.00
IUUC-Ont-071242	Oreochromis niloticus	53.08	8.00e-131	459.00
IUUC-Oan-072879	Ornithorhynchus anatinus	77.85	0.00e+00	713.00
IUUC-Ocu-074872	Oryctolagus cuniculus	61.49	6.00e-146	509.00
IUUC-Ola-087211	Oryzias latipes	47.83	5.00e-107	380.00
IUUC-Oga-088852	Otolemur garnettii	75.57	0.00e+00	697.00
IUUC-Oar-089812	Ovis aries	74.89	0.00e+00	689.00
IUUC-Ptr-091067	Pan troglodytes	77.63	0.00e+00	713.00
IUUC-Pan-091778	Papio anubis	77.40	0.00e+00	713.00
IUUC-Pfo-096845	Poecilia formosa	54.30	2.00e-130	459.00
IUUC-Pab-097892	Pongo abelii	76.16	0.00e+00	646.00
IUUC-Pca-100567	Procavia capensis	54.79	3.00e-130	457.00
IUUC-Pva-102560	Pteropus vampyrus	73.52	0.00e+00	669.00
IUUC-Rno-105662	Rattus norvegicus	71.46	0.00e+00	668.00
IUUC-Sha-107058	Sarcophilus harrisii	79.00	0.00e+00	725.00
IUUC-Sar-113643	Sorex araneus	64.61	1.00e-162	565.00
IUUC-Ssc-115791	Sus scrofa	77.17	0.00e+00	711.00
IUUC-Tgu-117145	Taeniopygia guttata	84.25	0.00e+00	731.00
IUUC-Tru-117875	Takifugu rubripes	54.67	7.00e-134	470.00
IUUC-Tsy-119030	Tarsius syrichta	75.55	5.00e-168	583.00
IUUC-Tni-119761	Tetraodon nigroviridis	51.82	3.00e-126	444.00
IUUC-Tbe-127757	Tupaia belangeri	75.19	7.00e-180	622.00
IUUC-Ttr-128762	Tursiops truncatus	78.08	0.00e+00	716.00
IUUC-Vpa-130360	Vicugna pacos	77.85	0.00e+00	719.00
IUUC-Xtr-131954	Xenopus tropicalis	64.16	5.00e-163	566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence