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Tag Content
iUUCD ID IUUC-Vda-129690
Ensembl Protein ID EGY18117
UniProt Accession G2XE69; G2XE69_VERDV
Genbank Protein ID EGY18117.1
Protein Name Ubiquitin-related modifier 1
Genbank Nucleotide ID DS572714
Gene Name URM1; VDAG_08451
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VDAG_08451 EGY18117 EGY18117
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 36.61 2.00e-13 68.60 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Verticillium dahliae
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as AHP1. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3 homolog UBA4. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins such as AHP1. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MLFEDQRKHA VSIPSRSEDG QPATIAHLID HLCKNVMKDS RKELFVLDDH IQPVVTLPGV 60
PSSLHHKQPF ACVHRPGILV LINDADWELE GEEAYELKAG DNILFVSTLH GG 112
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Protein Fasta Sequence


>IUUC-Vda-129690|ULD,UBQ_Other|Verticillium dahliae
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Nucleotide Sequence
(Fasta)
ATGCTATTCG AGGACCAGCG AAAGCATGCT GTCTCGATCC CTTCGCGCAG CGAGGATGGC 60
CAGCCTGCGA CCATTGCTCA TCTCATCGAC CACCTCTGCA AGAACGTCAT GAAAGACAGC 120
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Nucleotide Fasta Sequence


>IUUC-Vda-129690|ULD,UBQ_Other|Verticillium dahliae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
KEGG vda:VDAG_08451
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 40.18 6.00e-17 77.00
IUUC-Atr-003089 Amborella trichopoda 34.82 1.00e-13 65.90
IUUC-Apl-003382 Anas platyrhynchos 41.07 3.00e-17 77.40
IUUC-Aca-004981 Anolis carolinensis 40.18 9.00e-17 76.30
IUUC-Aly-005517 Arabidopsis lyrata 60.53 7.00e-10 53.10
IUUC-Ath-006718 Arabidopsis thaliana 60.53 5.00e-10 53.90
IUUC-Ago-007917 Ashbya gossypii 36.61 8.00e-16 73.20
IUUC-Acl-008054 Aspergillus clavatus 55.26 1.00e-18 82.40
IUUC-Afl-008704 Aspergillus flavus 53.57 2.00e-30 121.00
IUUC-Aor-009890 Aspergillus oryzae 53.57 3.00e-30 121.00
IUUC-Bta-012448 Bos taurus 40.18 7.00e-17 76.60
IUUC-Bci-013865 Botrytis cinerea 52.68 3.00e-31 124.00
IUUC-Bdi-014980 Brachypodium distachyon 35.42 2.00e-10 55.50
IUUC-Bol-016055 Brassica oleracea 33.33 8.00e-10 53.10
IUUC-Bra-016845 Brassica rapa 33.33 8.00e-10 53.10
IUUC-Cel-018485 Caenorhabditis elegans 55.56 5.00e-06 40.80
IUUC-Cja-019587 Callithrix jacchus 41.07 3.00e-17 77.80
IUUC-Cfa-020653 Canis familiaris 41.07 5.00e-17 77.40
IUUC-Cpo-021622 Cavia porcellus 41.07 3.00e-17 77.80
IUUC-Cre-023015 Chlamydomonas reinhardtii 35.71 2.00e-13 65.50
IUUC-Csa-023756 Chlorocebus sabaeus 37.08 2.00e-09 52.80
IUUC-Cgl-026518 Colletotrichum gloeosporioides 59.82 2.00e-35 139.00
IUUC-Cne-026953 Cryptococcus neoformans 36.52 2.00e-14 69.70
IUUC-Cme-027314 Cyanidioschyzon merolae 65.00 4.00e-12 60.80
IUUC-Dre-027884 Danio rerio 38.39 2.00e-15 72.00
IUUC-Dno-029262 Dasypus novemcinctus 37.36 2.00e-08 49.70
IUUC-Dor-030601 Dipodomys ordii 46.55 9.00e-08 46.60
IUUC-Dme-031893 Drosophila melanogaster 37.50 8.00e-15 70.10
IUUC-Ete-032773 Echinops telfairi 38.39 1.00e-15 72.80
IUUC-Eca-034187 Equus caballus 41.96 2.00e-17 78.60
IUUC-Eeu-034808 Erinaceus europaeus 40.18 2.00e-16 75.50
IUUC-Fca-036107 Felis catus 41.96 9.00e-18 79.70
IUUC-Fal-036607 Ficedula albicollis 39.29 3.00e-16 74.70
IUUC-Fox-037698 Fusarium oxysporum 59.82 2.00e-35 138.00
IUUC-Gmo-039492 Gadus morhua 41.07 2.00e-17 78.60
IUUC-Ggr-039965 Gaeumannomyces graminis 52.68 2.00e-28 116.00
IUUC-Gga-041268 Gallus gallus 41.07 2.00e-17 78.60
IUUC-Gac-042111 Gasterosteus aculeatus 41.07 3.00e-17 78.20
IUUC-Gma-043240 Glycine max 57.89 8.00e-10 53.10
IUUC-Ggo-045176 Gorilla gorilla 37.08 2.00e-05 39.70
IUUC-Hsa-046077 Homo sapiens 41.07 4.00e-13 64.30
IUUC-Itr-048111 Ictidomys tridecemlineatus 41.07 4.00e-13 63.90
IUUC-Kpa-049157 Komagataella pastoris 40.18 5.00e-14 67.40
IUUC-Lch-049889 Latimeria chalumnae 39.29 3.00e-16 74.70
IUUC-Lpe-050783 Leersia perrieri 47.46 5.00e-09 50.40
IUUC-Loc-052400 Lepisosteus oculatus 40.18 1.00e-16 75.90
IUUC-Lma-053259 Leptosphaeria maculans 50.89 5.00e-28 114.00
IUUC-Laf-053596 Loxodonta africana 40.35 4.00e-16 74.30
IUUC-Mcc-054845 Macaca mulatta 41.07 3.00e-17 77.80
IUUC-Meu-055968 Macropus eugenii 43.75 4.00e-19 84.00
IUUC-Mor-057126 Magnaporthe oryzae 54.46 1.00e-30 123.00
IUUC-Mpo-057311 Magnaporthe poae 53.57 3.00e-29 119.00
IUUC-Mtr-058266 Medicago truncatula 57.89 3.00e-10 54.70
IUUC-Mla-058847 Melampsora laricipopulina 65.85 3.00e-09 52.00
IUUC-Mga-059468 Meleagris gallopavo 41.07 2.00e-17 78.20
IUUC-Mvi-060235 Microbotryum violaceum 40.45 8.00e-12 60.80
IUUC-Mdo-061948 Monodelphis domestica 41.96 3.00e-18 81.30
IUUC-Mmu-063946 Mus musculus 41.96 3.00e-17 77.80
IUUC-Mac-064812 Musa acuminata 65.79 5.00e-11 57.40
IUUC-Mpu-066763 Mustela putorius furo 41.96 3.00e-17 78.20
IUUC-Mlu-066970 Myotis lucifugus 37.08 2.00e-09 52.00
IUUC-Ncr-068824 Neurospora crassa 45.54 6.00e-25 103.00
IUUC-Nle-069849 Nomascus leucogenys 37.08 3.00e-09 52.80
IUUC-Opr-070227 Ochotona princeps 41.07 3.00e-17 77.80
IUUC-Ont-072530 Oreochromis niloticus 41.96 5.00e-18 80.50
IUUC-Oan-073191 Ornithorhynchus anatinus 43.75 1.00e-18 82.40
IUUC-Ocu-074460 Oryctolagus cuniculus 41.96 8.00e-18 79.70
IUUC-Oba-075499 Oryza barthii 63.16 4.00e-09 52.40
IUUC-Obr-076896 Oryza brachyantha 63.16 3.00e-09 53.50
IUUC-Ogl-077834 Oryza glaberrima 63.16 2.00e-09 52.00
IUUC-Ogu-078622 Oryza glumaepatula 63.16 2.00e-09 52.00
IUUC-Oin-079358 Oryza indica 63.16 5.00e-09 52.40
IUUC-Olo-081035 Oryza longistaminata 33.63 2.00e-09 53.10
IUUC-Oni-082425 Oryza nivara 63.16 2.00e-09 52.00
IUUC-Opu-083461 Oryza punctata 62.16 1.00e-08 50.40
IUUC-Oru-084875 Oryza rufipogon 63.16 1.00e-09 52.00
IUUC-Oga-089128 Otolemur garnettii 41.96 2.00e-17 78.60
IUUC-Oar-089896 Ovis aries 40.18 7.00e-17 76.60
IUUC-Ptr-091618 Pan troglodytes 37.08 2.00e-05 39.70
IUUC-Pan-092238 Papio anubis 37.08 2.00e-09 52.80
IUUC-Psi-093879 Pelodiscus sinensis 40.18 4.00e-17 77.40
IUUC-Pma-094484 Petromyzon marinus 36.79 7.00e-13 63.50
IUUC-Ppa-095801 Physcomitrella patens 34.58 7.00e-12 60.10
IUUC-Pfo-097192 Poecilia formosa 41.96 5.00e-17 77.00
IUUC-Pab-098203 Pongo abelii 41.07 4.00e-13 64.30
IUUC-Pop-099614 Populus trichocarpa 57.89 1.00e-09 52.80
IUUC-Pca-100507 Procavia capensis 35.96 2.00e-09 51.20
IUUC-Ppe-101174 Prunus persica 29.46 3.00e-09 51.20
IUUC-Pva-102735 Pteropus vampyrus 41.44 1.00e-15 72.40
IUUC-Pgr-103510 Puccinia graminis 35.09 4.00e-09 51.20
IUUC-Ptt-103918 Puccinia triticina 33.33 6.00e-09 50.80
IUUC-Pte-104173 Pyrenophora teres 50.00 7.00e-29 116.00
IUUC-Pyt-104806 Pyrenophora triticirepentis 49.11 3.00e-28 114.00
IUUC-Rno-105820 Rattus norvegicus 41.07 1.00e-16 76.30
IUUC-Sce-106366 Saccharomyces cerevisiae 36.61 2.00e-14 68.60
IUUC-Sja-107727 Schizosaccharomyces japonicus 34.55 3.00e-14 68.60
IUUC-Spo-108074 Schizosaccharomyces pombe 33.93 2.00e-09 52.00
IUUC-Smo-108944 Selaginella moellendorffii 31.25 1.00e-09 52.40
IUUC-Sit-110277 Setaria italica 34.91 2.00e-10 55.10
IUUC-Sly-111505 Solanum lycopersicum 35.42 2.00e-11 58.20
IUUC-Stu-112076 Solanum tuberosum 35.42 3.00e-11 58.20
IUUC-Sbi-114274 Sorghum bicolor 34.31 4.00e-10 54.70
IUUC-Sre-114953 Sporisorium reilianum 39.25 5.00e-18 80.90
IUUC-Ssc-115418 Sus scrofa 41.07 3.00e-17 77.80
IUUC-Tgu-117311 Taeniopygia guttata 39.29 3.00e-16 74.70
IUUC-Tru-118598 Takifugu rubripes 39.29 7.00e-17 76.30
IUUC-Tni-120109 Tetraodon nigroviridis 37.50 1.00e-13 66.20
IUUC-Tca-120942 Theobroma cacao 57.89 1.00e-09 52.80
IUUC-Tre-122099 Trichoderma reesei 61.61 2.00e-29 118.00
IUUC-Tvi-122285 Trichoderma virens 61.61 7.00e-29 117.00
IUUC-Tae-125193 Triticum aestivum 37.14 6.00e-11 57.00
IUUC-Tur-126677 Triticum urartu 39.25 4.00e-12 61.20
IUUC-Tme-127120 Tuber melanosporum 51.79 3.00e-28 115.00
IUUC-Tbe-128050 Tupaia belangeri 73.68 3.00e-12 61.20
IUUC-Ttr-129019 Tursiops truncatus 40.18 1.00e-15 72.80
IUUC-Uma-129483 Ustilago maydis 40.19 1.00e-17 79.70
IUUC-Vvi-131174 Vitis vinifera 60.53 6.00e-10 53.50
IUUC-Xma-133862 Xiphophorus maculatus 41.96 5.00e-17 77.00
IUUC-Yli-134398 Yarrowia lipolytica 34.21 7.00e-14 66.60
IUUC-Zma-134964 Zea mays 32.08 3.00e-10 54.70
Created Date 25-Jun-2017

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