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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Spo-108045
Ensembl Protein ID SPAC11G7.04.1:pep
UniProt Accession P0CH07; O13697; O14257; P0C014; P0C015; Q76PD0; Q9HDZ4; RL402_SCHPO
Genbank Protein ID CAB55853.1
Protein Name Ubiquitin-60S ribosomal protein L40; Ubiquitin; 60S ribosomal protein L40; CEP52
Genbank Nucleotide ID CU329670
Gene Name ubi1; uep1; ubi2; SPAC1805.12c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPAC11G7.04 SPAC11G7.04.1 SPAC11G7.04.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein 3D Structure
PDBMMDB
Post-translational Modifications (PTMs)
dbPTM
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 6.90e-42 139.7 1 76
ULD/UDP/UBQ/UBQ_PIM 3.40e-29 98.7 1 73
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8
   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k ++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************986 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Ribosomal protein L40 is part of the 60S ribosomal subunit.
 Ribosomal protein L40 is part of the 60S ribosomal subunit.
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGIIEP SLKALASKYN CEKQICRKCY ARLPPRATNC RKKKCGHTNQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108045|ULD,NEDD8;ULD,UBQ_PIM|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTAAACGTGA CTGCTTTTTT CGGTAAGGGC TCTTACGGTG CTTTCAGTGA AGAAGGAATC 60
CTTTGTCCAC CACAATCATG CAGATTTTCG TCAAGACTTT GACCGGAAAG ACTATCACCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108045|ULD,NEDD8;ULD,UBQ_PIM|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0832--Ubl conjugation
Interpro

IPR001975--Ribosomal_L40e
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin
PRINTS

PR00348--UBIQUITIN
SMART

SM01377--Ribosomal_L40e
SM00213--UBQ
Gene Ontology

GO:0005829--C:cytosol
GO:0022625--C:cytosolic large ribosomal subunit
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0003735--F:structural constituent of ribosome
GO:0002181--P:cytoplasmic translation
GO:0042254--P:ribosome biogenesis
KEGG spo:SPAC11G7.04; spo:SPAC1805.12c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001006 Aegilops tauschii 60.26 5.00e-46 174.00
IUUC-Aml-001246 Ailuropoda melanoleuca 90.62 8.00e-66 239.00
IUUC-Atr-003081 Amborella trichopoda 72.09 4.00e-44 167.00
IUUC-Apl-004069 Anas platyrhynchos 87.95 3.00e-40 153.00
IUUC-Ath-007098 Arabidopsis thaliana 90.62 1.00e-65 239.00
IUUC-Ago-007932 Ashbya gossypii 96.88 4.00e-71 257.00
IUUC-Acl-008350 Aspergillus clavatus 90.98 1.00e-67 245.00
IUUC-Afl-008554 Aspergillus flavus 97.66 1.00e-71 259.00
IUUC-Afu-008984 Aspergillus fumigatus 96.09 6.00e-70 253.00
IUUC-Ang-009609 Aspergillus niger 97.66 5.00e-71 256.00
IUUC-Aor-009991 Aspergillus oryzae 96.06 2.00e-69 251.00
IUUC-Ate-010252 Aspergillus terreus 97.60 4.00e-70 256.00
IUUC-Ame-010785 Astyanax mexicanus 92.55 1.00e-48 182.00
IUUC-Bgr-012115 Blumeria graminis 94.40 1.00e-67 246.00
IUUC-Bta-013360 Bos taurus 90.62 8.00e-66 239.00
IUUC-Bci-013851 Botrytis cinerea 96.88 8.00e-71 256.00
IUUC-Bdi-014499 Brachypodium distachyon 92.19 6.00e-67 243.00
IUUC-Bol-015961 Brassica oleracea 91.41 3.00e-66 241.00
IUUC-Cel-018677 Caenorhabditis elegans 90.62 1.00e-66 242.00
IUUC-Cja-019572 Callithrix jacchus 90.62 8.00e-66 239.00
IUUC-Cfa-020339 Canis familiaris 90.62 8.00e-66 239.00
IUUC-Cpo-021534 Cavia porcellus 90.62 8.00e-66 239.00
IUUC-Cre-022567 Chlamydomonas reinhardtii 92.19 2.00e-66 241.00
IUUC-Csa-023398 Chlorocebus sabaeus 90.62 8.00e-66 239.00
IUUC-Cin-025266 Ciona intestinalis 90.62 5.00e-66 240.00
IUUC-Csv-026105 Ciona savignyi 90.55 8.00e-66 239.00
IUUC-Cgl-026502 Colletotrichum gloeosporioides 96.80 1.00e-68 252.00
IUUC-Cne-026913 Cryptococcus neoformans 96.09 2.00e-70 254.00
IUUC-Cme-027344 Cyanidioschyzon merolae 93.41 5.00e-46 174.00
IUUC-Dre-028761 Danio rerio 92.19 1.00e-66 242.00
IUUC-Dno-028899 Dasypus novemcinctus 90.62 5.00e-65 237.00
IUUC-Dor-030658 Dipodomys ordii 96.05 4.00e-39 150.00
IUUC-Dme-031588 Drosophila melanogaster 92.19 2.00e-66 242.00
IUUC-Ete-033120 Echinops telfairi 90.62 8.00e-66 239.00
IUUC-Eca-033787 Equus caballus 90.62 8.00e-66 239.00
IUUC-Eeu-035081 Erinaceus europaeus 94.29 1.00e-33 132.00
IUUC-Fca-035725 Felis catus 90.62 8.00e-66 239.00
IUUC-Fox-037870 Fusarium oxysporum 96.88 1.00e-70 256.00
IUUC-Fso-038461 Fusarium solani 100.00 7.00e-43 162.00
IUUC-Gmo-039163 Gadus morhua 91.41 3.00e-66 241.00
IUUC-Ggr-040034 Gaeumannomyces graminis 96.88 7.00e-71 257.00
IUUC-Gga-040909 Gallus gallus 89.06 4.00e-65 237.00
IUUC-Gac-041640 Gasterosteus aculeatus 91.41 4.00e-66 241.00
IUUC-Gma-043254 Glycine max 91.41 8.00e-67 243.00
IUUC-Ggo-045411 Gorilla gorilla 90.62 8.00e-66 239.00
IUUC-Hsa-046609 Homo sapiens 71.53 3.00e-50 188.00
IUUC-Hvu-047579 Hordeum vulgare 71.32 9.00e-52 193.00
IUUC-Itr-048586 Ictidomys tridecemlineatus 90.62 2.00e-66 243.00
IUUC-Kpa-049279 Komagataella pastoris 95.31 4.00e-70 254.00
IUUC-Lch-049971 Latimeria chalumnae 91.41 1.00e-66 243.00
IUUC-Lpe-051472 Leersia perrieri 81.20 1.00e-52 198.00
IUUC-Loc-052117 Lepisosteus oculatus 91.41 3.00e-66 241.00
IUUC-Lma-053049 Leptosphaeria maculans 97.66 7.00e-71 256.00
IUUC-Laf-054284 Loxodonta africana 90.62 2.00e-66 243.00
IUUC-Mcc-055710 Macaca mulatta 89.23 6.00e-65 238.00
IUUC-Meu-056411 Macropus eugenii 90.62 8.00e-66 239.00
IUUC-Mor-057008 Magnaporthe oryzae 96.88 6.00e-71 256.00
IUUC-Mpo-057360 Magnaporthe poae 96.88 7.00e-71 256.00
IUUC-Mtr-058437 Medicago truncatula 91.41 4.00e-66 241.00
IUUC-Mla-059080 Melampsora laricipopulina 93.00 2.00e-51 191.00
IUUC-Mmr-061335 Microcebus murinus 85.16 2.00e-59 218.00
IUUC-Mdo-062752 Monodelphis domestica 90.62 8.00e-66 239.00
IUUC-Mmu-063548 Mus musculus 90.62 2.00e-66 243.00
IUUC-Mac-064915 Musa acuminata 92.19 9.00e-67 243.00
IUUC-Mpu-066513 Mustela putorius furo 90.62 8.00e-66 239.00
IUUC-Mlu-068010 Myotis lucifugus 88.28 3.00e-64 234.00
IUUC-Nfi-068358 Neosartorya fischeri 97.62 8.00e-70 253.00
IUUC-Ncr-068799 Neurospora crassa 96.09 4.00e-70 254.00
IUUC-Opr-070655 Ochotona princeps 90.62 8.00e-66 239.00
IUUC-Ont-072180 Oreochromis niloticus 91.27 5.00e-65 237.00
IUUC-Oan-073196 Ornithorhynchus anatinus 90.62 8.00e-66 239.00
IUUC-Oba-075092 Oryza barthii 91.41 2.00e-66 241.00
IUUC-Obr-076156 Oryza brachyantha 91.41 2.00e-66 242.00
IUUC-Ogl-077471 Oryza glaberrima 91.41 2.00e-66 241.00
IUUC-Ogu-078259 Oryza glumaepatula 91.41 2.00e-66 241.00
IUUC-Oin-079901 Oryza indica 91.41 2.00e-66 241.00
IUUC-Ome-081343 Oryza meridionalis 91.41 2.00e-66 241.00
IUUC-Oni-082301 Oryza nivara 82.18 6.00e-35 138.00
IUUC-Opu-083839 Oryza punctata 66.42 3.00e-37 147.00
IUUC-Oru-085252 Oryza rufipogon 91.41 2.00e-66 241.00
IUUC-Osa-085747 Oryza sativa 79.85 5.00e-52 194.00
IUUC-Ola-086333 Oryzias latipes 90.62 5.00e-66 240.00
IUUC-Olu-087819 Ostreococcus lucimarinus 85.94 4.00e-63 231.00
IUUC-Oga-088027 Otolemur garnettii 90.62 8.00e-66 239.00
IUUC-Oar-090419 Ovis aries 90.62 8.00e-66 239.00
IUUC-Ptr-091593 Pan troglodytes 90.62 8.00e-66 239.00
IUUC-Pan-091806 Papio anubis 88.28 2.00e-62 228.00
IUUC-Psi-093654 Pelodiscus sinensis 90.62 8.00e-66 239.00
IUUC-Ppa-095174 Physcomitrella patens 92.19 1.00e-66 242.00
IUUC-Pfo-096492 Poecilia formosa 91.41 5.00e-66 240.00
IUUC-Pab-098004 Pongo abelii 90.62 8.00e-66 239.00
IUUC-Pop-098929 Populus trichocarpa 92.19 9.00e-67 243.00
IUUC-Ppe-101497 Prunus persica 91.41 3.00e-66 241.00
IUUC-Pva-102945 Pteropus vampyrus 90.62 8.00e-66 239.00
IUUC-Pgr-103268 Puccinia graminis 92.97 6.00e-69 251.00
IUUC-Ptt-103804 Puccinia triticina 94.06 9.00e-54 199.00
IUUC-Pte-104101 Pyrenophora teres 96.09 4.00e-70 254.00
IUUC-Pyt-104639 Pyrenophora triticirepentis 96.09 1.00e-69 252.00
IUUC-Rno-105290 Rattus norvegicus 90.62 8.00e-66 239.00
IUUC-Sce-106249 Saccharomyces cerevisiae 96.88 6.00e-71 256.00
IUUC-Sha-106570 Sarcophilus harrisii 90.62 8.00e-66 239.00
IUUC-Sja-107834 Schizosaccharomyces japonicus 99.22 8.00e-72 259.00
IUUC-Ssl-108670 Sclerotinia sclerotiorum 97.66 4.00e-71 257.00
IUUC-Sit-110085 Setaria italica 88.89 4.00e-65 238.00
IUUC-Sly-111884 Solanum lycopersicum 92.19 9.00e-67 243.00
IUUC-Stu-112385 Solanum tuberosum 91.74 6.00e-63 230.00
IUUC-Sar-112942 Sorex araneus 91.41 3.00e-66 241.00
IUUC-Sbi-114790 Sorghum bicolor 90.62 9.00e-66 239.00
IUUC-Sre-114908 Sporisorium reilianum 94.53 3.00e-69 251.00
IUUC-Ssc-116417 Sus scrofa 90.62 8.00e-66 239.00
IUUC-Tru-117557 Takifugu rubripes 91.41 3.00e-66 241.00
IUUC-Tni-119715 Tetraodon nigroviridis 91.41 3.00e-66 241.00
IUUC-Tca-121404 Theobroma cacao 91.41 3.00e-66 241.00
IUUC-Tvi-122611 Trichoderma virens 95.31 4.00e-70 253.00
IUUC-Tae-125373 Triticum aestivum 75.16 5.00e-62 227.00
IUUC-Tur-126527 Triticum urartu 92.19 6.00e-67 243.00
IUUC-Tme-127138 Tuber melanosporum 99.20 2.00e-70 255.00
IUUC-Tbe-127851 Tupaia belangeri 96.05 2.00e-39 151.00
IUUC-Ttr-128939 Tursiops truncatus 90.62 8.00e-66 239.00
IUUC-Uma-129619 Ustilago maydis 94.53 3.00e-69 251.00
IUUC-Vda-129775 Verticillium dahliae 96.83 1.00e-69 252.00
IUUC-Vvi-131414 Vitis vinifera 91.41 3.00e-66 241.00
IUUC-Xtr-131921 Xenopus tropicalis 90.62 8.00e-66 239.00
IUUC-Xma-134071 Xiphophorus maculatus 91.41 5.00e-66 240.00
IUUC-Yli-134671 Yarrowia lipolytica 99.22 9.00e-72 259.00
Created Date 25-Jun-2017

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