iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093493

Ensembl Protein ID

ENSPSIP00000011096.1

UniProt Accession

K7FST6; K7FST6_PELSI

Genbank Protein ID

ENSPSIP00000011096

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01051557

Gene Name

TRIM56

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000010035.1	ENSPSIT00000011152.1	ENSPSIP00000011096.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-08	34.1	21	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++++ p++lpC H++++ Cl+ +      + +  rCP Cr
   Q: 21   CPICLERLRR-PKILPCLHTYCQGCLEGL----LGEGPGLRCPECR 61
           **********.***************888....88**********8 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

LTMASDAPSL SDAITTDFLT CPICLERLRR PKILPCLHTY CQGCLEGLLG EGPGLRCPEC 60
REDVPLPQGV DSLKSNFFVT GLLELVRPEG ETGLACALCP LLGPQQGSHP AVSRCLDCAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCACCATGG CCTCGGATGC CCCGTCCCTC TCAGACGCCA TCACCACCGA CTTCCTGACC 60
TGCCCCATCT GCCTGGAGCG GCTGCGCCGA CCGAAGATCC TGCCCTGTCT GCACACTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001496	Ailuropoda melanoleuca	45.32	3.00e-59	223.00
IUUC-Aca-004996	Anolis carolinensis	50.75	2.00e-67	250.00
IUUC-Bta-012368	Bos taurus	44.06	3.00e-57	216.00
IUUC-Cja-019698	Callithrix jacchus	46.59	2.00e-59	223.00
IUUC-Csa-023090	Chlorocebus sabaeus	46.24	2.00e-59	223.00
IUUC-Dno-030051	Dasypus novemcinctus	46.04	1.00e-55	211.00
IUUC-Ete-032312	Echinops telfairi	55.93	3.00e-28	117.00
IUUC-Eca-033253	Equus caballus	57.47	4.00e-40	157.00
IUUC-Eeu-034772	Erinaceus europaeus	65.52	1.00e-25	109.00
IUUC-Fca-036198	Felis catus	44.25	5.00e-60	225.00
IUUC-Ggo-045486	Gorilla gorilla	47.37	5.00e-60	225.00
IUUC-Hsa-046238	Homo sapiens	45.86	6.00e-59	222.00
IUUC-Itr-048481	Ictidomys tridecemlineatus	45.86	2.00e-59	223.00
IUUC-Loc-052915	Lepisosteus oculatus	40.08	5.00e-37	149.00
IUUC-Laf-053640	Loxodonta africana	44.80	4.00e-58	219.00
IUUC-Mcc-055540	Macaca mulatta	46.24	3.00e-59	223.00
IUUC-Mmr-060840	Microcebus murinus	46.97	3.00e-59	223.00
IUUC-Mmu-064375	Mus musculus	44.15	8.00e-57	214.00
IUUC-Mpu-066797	Mustela putorius furo	44.64	3.00e-59	223.00
IUUC-Mlu-067996	Myotis lucifugus	45.91	6.00e-61	228.00
IUUC-Nle-069238	Nomascus leucogenys	57.40	1.00e-39	156.00
IUUC-Oga-089156	Otolemur garnettii	46.98	7.00e-61	228.00
IUUC-Oar-090056	Ovis aries	44.09	4.00e-57	215.00
IUUC-Ptr-090837	Pan troglodytes	46.62	2.00e-59	223.00
IUUC-Pab-097607	Pongo abelii	46.62	8.00e-60	224.00
IUUC-Pva-102758	Pteropus vampyrus	44.13	3.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence