iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131233

Ensembl Protein ID

VIT_08s0007g06740.t01

UniProt Accession

Q9XGC3; Q9XGC3_VITVI

Genbank Protein ID

CAB40578.1; CBI29998.3

Protein Name

E3 ubiquitin-protein ligase

Genbank Nucleotide ID

Y18472; FN595991

Gene Name

VIT_08s0007g06740

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g06740	VIT_08s0007g06740.t01	VIT_08s0007g06740.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.60	2.00e-41	166.00	IUUC-Hsa-046357
E3 activity/RING/RING	34.64	7.00e-41	165.00	IUUC-Mmu-064129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MAPGGSTYKE VLESHSTVTD YDIAMTKADT NLTPAKTTAG LSGKKGISSP NGVHELLECP 60
VCTSLMYPPI YQCPSGHTLC SNCKSRVHNC CPTCRHELGD IRCLALEKVA ESLELPCRYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGAACATA AATTGTATTA AAGACGACAC AGAAGTGAAA AGTATATTTT AAAAGAACAG 60
AAAACAAAAA AGAAAAGAAA AGAAAAGAAA ATTTGTAGAT CGTGGGAAAA AGGACAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

vvi:100233085

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000061	Aegilops tauschii	67.42	3.00e-123	433.00
IUUC-Aml-001186	Ailuropoda melanoleuca	34.95	1.00e-43	169.00
IUUC-Atr-003118	Amborella trichopoda	73.18	1.00e-133	468.00
IUUC-Apl-003813	Anas platyrhynchos	35.00	5.00e-43	166.00
IUUC-Aca-005014	Anolis carolinensis	34.15	4.00e-43	167.00
IUUC-Aly-006207	Arabidopsis lyrata	81.82	7.00e-153	531.00
IUUC-Ath-007049	Arabidopsis thaliana	82.41	4.00e-153	533.00
IUUC-Bta-012887	Bos taurus	34.60	5.00e-43	167.00
IUUC-Bdi-014729	Brachypodium distachyon	78.07	2.00e-130	457.00
IUUC-Bol-016263	Brassica oleracea	83.06	4.00e-154	536.00
IUUC-Bra-016847	Brassica rapa	79.41	1.00e-150	525.00
IUUC-Cja-019796	Callithrix jacchus	34.60	1.00e-42	166.00
IUUC-Cfa-020642	Canis familiaris	35.45	4.00e-43	167.00
IUUC-Cpo-022348	Cavia porcellus	34.64	3.00e-42	164.00
IUUC-Csa-023974	Chlorocebus sabaeus	34.60	6.00e-43	166.00
IUUC-Dno-029764	Dasypus novemcinctus	35.00	6.00e-43	167.00
IUUC-Ete-032423	Echinops telfairi	35.34	3.00e-42	164.00
IUUC-Eca-033536	Equus caballus	35.00	5.00e-43	166.00
IUUC-Eeu-035314	Erinaceus europaeus	33.79	2.00e-42	165.00
IUUC-Fca-035362	Felis catus	34.95	1.00e-43	169.00
IUUC-Fal-037487	Ficedula albicollis	34.88	7.00e-44	169.00
IUUC-Gga-040269	Gallus gallus	35.00	5.00e-43	166.00
IUUC-Gma-042926	Glycine max	79.12	7.00e-130	455.00
IUUC-Ggo-045444	Gorilla gorilla	34.60	6.00e-43	166.00
IUUC-Hsa-046357	Homo sapiens	34.60	6.00e-43	166.00
IUUC-Hvu-047574	Hordeum vulgare	67.42	2.00e-123	434.00
IUUC-Itr-048046	Ictidomys tridecemlineatus	34.64	3.00e-42	164.00
IUUC-Lch-049504	Latimeria chalumnae	35.56	4.00e-42	164.00
IUUC-Lpe-050879	Leersia perrieri	69.48	5.00e-124	436.00
IUUC-Loc-052191	Lepisosteus oculatus	35.07	2.00e-42	165.00
IUUC-Laf-053668	Loxodonta africana	35.00	5.00e-43	166.00
IUUC-Mcc-054640	Macaca mulatta	34.60	6.00e-43	166.00
IUUC-Mtr-057852	Medicago truncatula	79.29	2.00e-148	517.00
IUUC-Mga-059503	Meleagris gallopavo	35.00	7.00e-43	166.00
IUUC-Mmr-060794	Microcebus murinus	34.64	3.00e-42	164.00
IUUC-Mmu-064129	Mus musculus	34.64	2.00e-42	165.00
IUUC-Mac-065670	Musa acuminata	79.20	1.00e-133	468.00
IUUC-Mpu-066488	Mustela putorius furo	34.95	1.00e-43	169.00
IUUC-Mlu-067207	Myotis lucifugus	35.45	4.00e-43	167.00
IUUC-Nle-069706	Nomascus leucogenys	34.60	1.00e-42	165.00
IUUC-Opr-070341	Ochotona princeps	26.58	2.00e-12	65.10
IUUC-Oan-073701	Ornithorhynchus anatinus	25.00	3.00e-12	64.70
IUUC-Ocu-074876	Oryctolagus cuniculus	34.95	2.00e-43	168.00
IUUC-Oba-075454	Oryza barthii	68.06	7.00e-124	435.00
IUUC-Obr-076037	Oryza brachyantha	77.36	1.00e-125	441.00
IUUC-Ogl-077712	Oryza glaberrima	68.06	7.00e-124	435.00
IUUC-Ogu-078910	Oryza glumaepatula	68.06	8.00e-124	436.00
IUUC-Oin-079749	Oryza indica	68.06	7.00e-124	435.00
IUUC-Olo-080244	Oryza longistaminata	70.33	4.00e-126	444.00
IUUC-Ome-081318	Oryza meridionalis	68.39	8.00e-124	435.00
IUUC-Oni-083109	Oryza nivara	68.06	7.00e-124	435.00
IUUC-Opu-084065	Oryza punctata	68.06	2.00e-123	434.00
IUUC-Oru-084785	Oryza rufipogon	68.06	7.00e-124	435.00
IUUC-Osa-085610	Oryza sativa	68.06	7.00e-124	435.00
IUUC-Oga-088399	Otolemur garnettii	34.64	3.00e-42	164.00
IUUC-Oar-089323	Ovis aries	34.60	5.00e-43	167.00
IUUC-Ptr-090692	Pan troglodytes	34.64	3.00e-42	164.00
IUUC-Pan-092012	Papio anubis	34.60	6.00e-43	166.00
IUUC-Psi-093687	Pelodiscus sinensis	34.88	3.00e-44	171.00
IUUC-Pma-094387	Petromyzon marinus	34.17	5.00e-43	166.00
IUUC-Ppa-095212	Physcomitrella patens	84.15	9.00e-136	474.00
IUUC-Pab-097555	Pongo abelii	34.60	6.00e-43	166.00
IUUC-Rno-104866	Rattus norvegicus	34.64	2.00e-42	165.00
IUUC-Sha-106547	Sarcophilus harrisii	34.95	1.00e-43	168.00
IUUC-Smo-109412	Selaginella moellendorffii	76.45	3.00e-142	496.00
IUUC-Sit-110245	Setaria italica	78.87	2.00e-127	448.00
IUUC-Sbi-114035	Sorghum bicolor	79.25	1.00e-128	451.00
IUUC-Tgu-116579	Taeniopygia guttata	35.00	5.00e-43	166.00
IUUC-Tca-121228	Theobroma cacao	72.22	9.00e-131	458.00
IUUC-Tae-123647	Triticum aestivum	67.42	3.00e-123	433.00
IUUC-Tur-126259	Triticum urartu	77.82	2.00e-127	447.00
IUUC-Xtr-132553	Xenopus tropicalis	34.64	3.00e-42	164.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence