iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-106082

Ensembl Protein ID

ENSRNOP00000054476.3

UniProt Accession

D4A7Z1; D4A7Z1_RAT

Genbank Protein ID

ENSRNOP00000054476

Protein Name

RIMS-binding protein 3

Genbank Nucleotide ID

AC111344

Gene Name

Rimbp3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000030452.4	ENSRNOT00000051991.4	ENSRNOP00000054476.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	1.70e-13	50.7	843	887

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 16   nddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           + deL l++Gd v+v   +  + g  +g +  +g+rGl+P+n ve +
   Q: 843  SHDELPLTAGDYVYVF-GDVDEDGFYEG-ELVNGQRGLVPSNLVEPI 887
           68*************9.99999******.599************987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTKDSPTPLG GGRASPKKPG SPGPAAAVLE EQRRELEKLR AELEGERARG RSERRRFATQ 60
TRQLREAAEQ ERQQLADHLR SKWEARRLRE LRQLQEEVQR EREAEIRQLL RWKEAELRQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGTGGGGC GGTTGGCAGC GGCCGGGGGC GGAGGCCGTT GGCTAACTGG CCTACCAATA 60
CCAAGCTATC TCTGGCTTCT TGCCGGGCTG CGGCCACAAT GACAAAGGAT TCACCCACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003961--FN3_dom
IPR013783--Ig-like_fold
IPR006037--RCK_C
IPR011511--SH3_2
IPR001452--SH3_domain

PROSITE

PS50853--FN3
PS50002--SH3

Pfam

PF07653--SH3_2
PF14604--SH3_9

SMART

SM00060--FN3
SM00326--SH3

KEGG

rno:303785

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001623	Ailuropoda melanoleuca	60.06	0.00e+00	1495.00
IUUC-Cja-018830	Callithrix jacchus	60.57	0.00e+00	1508.00
IUUC-Cpo-021571	Cavia porcellus	59.35	0.00e+00	1459.00
IUUC-Csa-023384	Chlorocebus sabaeus	61.94	0.00e+00	1511.00
IUUC-Dno-029522	Dasypus novemcinctus	60.57	0.00e+00	1514.00
IUUC-Eca-033941	Equus caballus	61.90	0.00e+00	1474.00
IUUC-Fca-036257	Felis catus	60.44	0.00e+00	1558.00
IUUC-Hsa-045889	Homo sapiens	62.81	0.00e+00	1554.00
IUUC-Itr-048554	Ictidomys tridecemlineatus	65.42	0.00e+00	1657.00
IUUC-Meu-056071	Macropus eugenii	42.35	2.00e-132	466.00
IUUC-Mmr-061493	Microcebus murinus	63.90	0.00e+00	1432.00
IUUC-Mdo-062621	Monodelphis domestica	50.48	3.00e-102	367.00
IUUC-Mpu-065689	Mustela putorius furo	61.20	0.00e+00	1537.00
IUUC-Mlu-067063	Myotis lucifugus	59.99	0.00e+00	1492.00
IUUC-Nle-069255	Nomascus leucogenys	61.76	0.00e+00	1456.00
IUUC-Ocu-074737	Oryctolagus cuniculus	60.18	0.00e+00	935.00
IUUC-Oga-088745	Otolemur garnettii	61.86	0.00e+00	1518.00
IUUC-Pab-097875	Pongo abelii	61.45	0.00e+00	1501.00
IUUC-Pva-102342	Pteropus vampyrus	62.64	0.00e+00	1427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence