iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107995

Ensembl Protein ID

EEB05734

UniProt Accession

B6JWI3; B6JWI3_SCHJY

Genbank Protein ID

EEB05734.1

Protein Name

Transcription factor TFIIH complex subunit Ssl1

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00758

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00758	EEB05734	EEB05734

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	52.85	8.00e-115	408.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSTLTKDYDD SDNSDQDGDE RVSKNGSKQT KSQHKEGYTW EGEYQRSWDI VKEDAEGSLA 60
GVVEGLINAG KRKRILRDTT PLQRGIIRHL ILVVDLSIAM EERDFRTKRV DLQIKYGTEF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTACTC TTACCAAAGA CTACGACGAT TCAGATAATT CCGATCAAGA TGGAGACGAA 60
AGAGTTTCCA AAAACGGTTC CAAACAGACG AAATCGCAGC ACAAGGAAGG TTATACTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005829--C:cytosol
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	38.57	1.00e-49	187.00
IUUC-Aml-002041	Ailuropoda melanoleuca	41.07	9.00e-77	278.00
IUUC-Atr-003056	Amborella trichopoda	40.06	1.00e-67	248.00
IUUC-Apl-003464	Anas platyrhynchos	39.56	3.00e-66	243.00
IUUC-Aca-004745	Anolis carolinensis	41.97	8.00e-77	278.00
IUUC-Aly-005559	Arabidopsis lyrata	39.53	2.00e-75	274.00
IUUC-Ath-007556	Arabidopsis thaliana	39.53	3.00e-75	273.00
IUUC-Ago-007851	Ashbya gossypii	54.15	3.00e-123	432.00
IUUC-Acl-008100	Aspergillus clavatus	54.30	5.00e-133	465.00
IUUC-Afl-008649	Aspergillus flavus	48.84	1.00e-19	85.50
IUUC-Afu-009066	Aspergillus fumigatus	53.65	2.00e-136	476.00
IUUC-Ani-009372	Aspergillus nidulans	52.68	2.00e-130	456.00
IUUC-Ang-009726	Aspergillus niger	53.44	2.00e-138	483.00
IUUC-Aor-010135	Aspergillus oryzae	55.30	2.00e-130	457.00
IUUC-Ate-010399	Aspergillus terreus	48.66	2.00e-46	176.00
IUUC-Ame-011618	Astyanax mexicanus	41.12	2.00e-84	303.00
IUUC-Bgr-012154	Blumeria graminis	51.54	4.00e-131	459.00
IUUC-Bta-012353	Bos taurus	42.60	1.00e-80	291.00
IUUC-Bci-013932	Botrytis cinerea	57.51	3.00e-136	476.00
IUUC-Bdi-014391	Brachypodium distachyon	39.24	2.00e-74	270.00
IUUC-Bol-015128	Brassica oleracea	40.00	1.00e-77	281.00
IUUC-Bra-017932	Brassica rapa	40.00	1.00e-77	281.00
IUUC-Cel-018649	Caenorhabditis elegans	34.52	3.00e-56	209.00
IUUC-Cja-018776	Callithrix jacchus	40.56	1.00e-75	274.00
IUUC-Cfa-020584	Canis familiaris	41.07	8.00e-77	278.00
IUUC-Cpo-021300	Cavia porcellus	41.07	3.00e-77	280.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	37.18	2.00e-62	230.00
IUUC-Csa-024092	Chlorocebus sabaeus	41.07	9.00e-77	278.00
IUUC-Cho-024919	Choloepus hoffmanni	39.27	3.00e-33	132.00
IUUC-Cin-025386	Ciona intestinalis	38.89	1.00e-75	275.00
IUUC-Csv-026295	Ciona savignyi	38.83	4.00e-75	273.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	50.12	5.00e-116	409.00
IUUC-Cne-026956	Cryptococcus neoformans	35.59	1.00e-79	288.00
IUUC-Cme-027150	Cyanidioschyzon merolae	27.37	1.00e-40	158.00
IUUC-Dre-027962	Danio rerio	41.22	5.00e-86	308.00
IUUC-Dno-029979	Dasypus novemcinctus	39.74	2.00e-60	224.00
IUUC-Dor-030735	Dipodomys ordii	34.78	9.40e-01	27.70
IUUC-Dse-031405	Dothistroma septosporum	47.13	6.00e-110	389.00
IUUC-Dme-031710	Drosophila melanogaster	35.44	2.00e-71	260.00
IUUC-Ete-032631	Echinops telfairi	38.07	8.00e-70	255.00
IUUC-Eca-034054	Equus caballus	43.06	5.00e-78	282.00
IUUC-Fca-035724	Felis catus	39.80	8.00e-72	261.00
IUUC-Fal-036987	Ficedula albicollis	40.05	8.00e-82	295.00
IUUC-Fox-037692	Fusarium oxysporum	50.58	3.00e-126	442.00
IUUC-Fso-038442	Fusarium solani	50.83	8.00e-120	421.00
IUUC-Gmo-039273	Gadus morhua	40.31	8.00e-82	295.00
IUUC-Ggr-040009	Gaeumannomyces graminis	44.95	1.00e-103	368.00
IUUC-Gga-041089	Gallus gallus	41.33	3.00e-83	300.00
IUUC-Gac-041978	Gasterosteus aculeatus	39.95	2.00e-76	277.00
IUUC-Gma-043371	Glycine max	41.37	1.00e-82	297.00
IUUC-Hsa-046001	Homo sapiens	40.82	4.00e-76	276.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	41.58	1.00e-83	301.00
IUUC-Kpa-049235	Komagataella pastoris	49.10	4.00e-118	416.00
IUUC-Lch-049926	Latimeria chalumnae	40.82	2.00e-80	290.00
IUUC-Lpe-051352	Leersia perrieri	39.70	3.00e-72	263.00
IUUC-Loc-051987	Lepisosteus oculatus	41.73	5.00e-84	302.00
IUUC-Lma-053171	Leptosphaeria maculans	42.00	4.00e-97	346.00
IUUC-Laf-054372	Loxodonta africana	41.58	1.00e-79	287.00
IUUC-Mcc-055108	Macaca mulatta	41.07	9.00e-77	278.00
IUUC-Mor-056990	Magnaporthe oryzae	51.03	2.00e-121	427.00
IUUC-Mtr-058401	Medicago truncatula	41.12	3.00e-83	300.00
IUUC-Mla-059186	Melampsora laricipopulina	48.40	2.00e-104	370.00
IUUC-Mvi-060262	Microbotryum violaceum	43.00	2.00e-95	341.00
IUUC-Mmr-061688	Microcebus murinus	39.74	2.00e-68	250.00
IUUC-Mdo-062154	Monodelphis domestica	40.05	3.00e-79	286.00
IUUC-Mmu-064232	Mus musculus	40.71	8.00e-76	275.00
IUUC-Mac-065091	Musa acuminata	41.69	2.00e-78	284.00
IUUC-Mpu-066747	Mustela putorius furo	38.52	3.00e-65	239.00
IUUC-Mlu-067799	Myotis lucifugus	38.72	3.00e-67	246.00
IUUC-Nfi-068371	Neosartorya fischeri	37.11	8.00e-28	114.00
IUUC-Ncr-068704	Neurospora crassa	48.32	7.00e-113	398.00
IUUC-Nle-069054	Nomascus leucogenys	40.56	7.00e-75	272.00
IUUC-Ont-071624	Oreochromis niloticus	40.71	2.00e-79	286.00
IUUC-Oan-072898	Ornithorhynchus anatinus	41.33	8.00e-80	288.00
IUUC-Ocu-074289	Oryctolagus cuniculus	40.52	2.00e-61	227.00
IUUC-Oba-075985	Oryza barthii	39.85	9.00e-74	268.00
IUUC-Obr-076887	Oryza brachyantha	40.25	1.00e-75	275.00
IUUC-Ogl-077823	Oryza glaberrima	39.85	9.00e-74	268.00
IUUC-Ogu-078412	Oryza glumaepatula	41.28	7.00e-64	236.00
IUUC-Oin-079569	Oryza indica	38.91	9.00e-50	189.00
IUUC-Olo-080249	Oryza longistaminata	36.74	1.00e-49	189.00
IUUC-Ome-081240	Oryza meridionalis	41.28	1.00e-63	235.00
IUUC-Oni-082152	Oryza nivara	41.28	1.00e-63	234.00
IUUC-Opu-084011	Oryza punctata	39.59	2.00e-73	267.00
IUUC-Oru-084719	Oryza rufipogon	40.17	2.00e-64	237.00
IUUC-Osa-085286	Oryza sativa	39.85	1.00e-73	268.00
IUUC-Ola-086525	Oryzias latipes	38.18	8.00e-65	238.00
IUUC-Olu-087876	Ostreococcus lucimarinus	36.18	5.00e-57	213.00
IUUC-Oga-088125	Otolemur garnettii	41.73	8.00e-78	281.00
IUUC-Oar-089701	Ovis aries	42.35	4.00e-80	289.00
IUUC-Ptr-091218	Pan troglodytes	40.82	1.00e-76	278.00
IUUC-Pan-091755	Papio anubis	41.07	9.00e-77	278.00
IUUC-Psi-094061	Pelodiscus sinensis	40.56	1.00e-81	294.00
IUUC-Pma-094430	Petromyzon marinus	40.56	3.00e-54	202.00
IUUC-Pno-094900	Phaeosphaeria nodorum	34.33	3.00e-57	214.00
IUUC-Ppa-095895	Physcomitrella patens	41.33	4.00e-85	306.00
IUUC-Pfo-096297	Poecilia formosa	42.80	4.00e-54	202.00
IUUC-Pab-097717	Pongo abelii	41.07	9.00e-77	278.00
IUUC-Pop-098938	Populus trichocarpa	40.05	1.00e-76	278.00
IUUC-Pca-100389	Procavia capensis	40.41	2.00e-55	207.00
IUUC-Ppe-102045	Prunus persica	41.94	8.00e-81	291.00
IUUC-Pva-102357	Pteropus vampyrus	39.07	1.00e-28	117.00
IUUC-Pgr-103399	Puccinia graminis	46.10	3.00e-102	363.00
IUUC-Ptt-103872	Puccinia triticina	48.29	3.00e-106	376.00
IUUC-Pte-104092	Pyrenophora teres	44.41	1.00e-89	321.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	43.87	6.00e-89	319.00
IUUC-Rno-105515	Rattus norvegicus	41.98	6.00e-80	288.00
IUUC-Sce-106434	Saccharomyces cerevisiae	52.85	4.00e-121	426.00
IUUC-Sha-106808	Sarcophilus harrisii	40.05	7.00e-79	285.00
IUUC-Spo-108044	Schizosaccharomyces pombe	72.63	1.00e-180	623.00
IUUC-Smo-109581	Selaginella moellendorffii	40.77	7.00e-78	281.00
IUUC-Sit-110704	Setaria italica	39.55	8.00e-76	275.00
IUUC-Sly-110990	Solanum lycopersicum	41.64	5.00e-66	242.00
IUUC-Stu-112542	Solanum tuberosum	35.59	8.00e-35	138.00
IUUC-Sar-113766	Sorex araneus	40.92	2.00e-63	233.00
IUUC-Sbi-114016	Sorghum bicolor	39.34	2.00e-74	270.00
IUUC-Sre-115099	Sporisorium reilianum	44.58	1.00e-105	375.00
IUUC-Ssc-115277	Sus scrofa	41.62	7.00e-75	271.00
IUUC-Tgu-117343	Taeniopygia guttata	39.80	1.00e-80	291.00
IUUC-Tru-118397	Takifugu rubripes	39.19	4.00e-77	279.00
IUUC-Tni-120272	Tetraodon nigroviridis	40.00	1.00e-77	281.00
IUUC-Tca-121514	Theobroma cacao	40.25	3.00e-81	293.00
IUUC-Tre-121990	Trichoderma reesei	49.77	7.00e-117	411.00
IUUC-Tvi-122504	Trichoderma virens	52.92	2.00e-110	390.00
IUUC-Tae-123153	Triticum aestivum	39.85	1.00e-75	275.00
IUUC-Tur-126693	Triticum urartu	43.70	3.00e-60	223.00
IUUC-Tme-127011	Tuber melanosporum	58.23	8.00e-139	484.00
IUUC-Tbe-127939	Tupaia belangeri	40.82	2.00e-75	273.00
IUUC-Ttr-128889	Tursiops truncatus	36.22	3.00e-67	246.00
IUUC-Uma-129450	Ustilago maydis	44.86	4.00e-107	379.00
IUUC-Vda-129919	Verticillium dahliae	51.73	2.00e-106	377.00
IUUC-Vvi-130928	Vitis vinifera	41.52	2.00e-80	290.00
IUUC-Xtr-131891	Xenopus tropicalis	37.28	1.00e-72	265.00
IUUC-Xma-133260	Xiphophorus maculatus	42.40	2.00e-53	200.00
IUUC-Yli-134578	Yarrowia lipolytica	52.97	2.00e-119	420.00
IUUC-Zma-135427	Zea mays	39.55	3.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence