iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049439

Ensembl Protein ID

ENSLACP00000000194.1

UniProt Accession

H2ZS23; H2ZS23_LATCH

Genbank Protein ID

ENSLACP00000000194

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01065749

Gene Name

ATG16L1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000000175.1	ENSLACT00000000196.1	ENSLACP00000000194.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-14	51.3	518	560

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtcl.af.........sd.tllvsGsdDgtikvWDlrtgvllk 37
           v+cl  +         +d +++ +Gs Dg+++vW+++tg+++k
   Q: 518  VFCLfVWiflravissPDgCYVMAGSADGVLYVWNVHTGKVEK 560
           8997235999999999999********************9986 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

RAPWAMSGRL CLWKRRISEQ LRQRDRIQRL AFEELIQQYN RLLEKSDLQS VLAEKLQVDK 60
YDVQNRHDVS PVHDGVRNDA LLQEMAQMRI KHQEELTELH KKRGEVGALL FEPQNQMQQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTTCTCA AGTCCCCGCG AAAACTAGGA AAGGTGCCAT TCCCAAGATG GCGGCAGCGA 60
CGGCGGGGAG CGGCTGAAAG GGAACCGTCA GTAAGACAAA CCAGACCCGA GCGGAGCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003384	Anas platyrhynchos	50.25	4.00e-144	504.00
IUUC-Bta-012388	Bos taurus	50.80	2.00e-145	509.00
IUUC-Cja-018898	Callithrix jacchus	42.52	1.00e-103	370.00
IUUC-Cfa-020484	Canis familiaris	50.89	7.00e-142	497.00
IUUC-Csa-024019	Chlorocebus sabaeus	51.77	2.00e-142	499.00
IUUC-Cho-024311	Choloepus hoffmanni	75.58	3.00e-76	279.00
IUUC-Dno-029728	Dasypus novemcinctus	49.12	8.00e-141	493.00
IUUC-Dor-030587	Dipodomys ordii	53.46	4.00e-47	182.00
IUUC-Eca-034214	Equus caballus	46.38	6.00e-103	367.00
IUUC-Fal-037593	Ficedula albicollis	48.87	5.00e-131	461.00
IUUC-Gmo-039042	Gadus morhua	61.17	3.00e-63	236.00
IUUC-Gga-040986	Gallus gallus	50.16	2.00e-151	528.00
IUUC-Gac-041351	Gasterosteus aculeatus	46.73	1.00e-141	496.00
IUUC-Hsa-046632	Homo sapiens	50.73	2.00e-142	499.00
IUUC-Loc-052610	Lepisosteus oculatus	49.13	7.00e-153	533.00
IUUC-Laf-053936	Loxodonta africana	49.92	2.00e-142	499.00
IUUC-Meu-056516	Macropus eugenii	43.33	1.00e-109	390.00
IUUC-Mga-059777	Meleagris gallopavo	48.32	2.00e-141	496.00
IUUC-Mdo-062969	Monodelphis domestica	49.92	9.00e-144	503.00
IUUC-Mlu-067651	Myotis lucifugus	50.00	9.00e-139	486.00
IUUC-Nle-069853	Nomascus leucogenys	49.27	1.00e-136	479.00
IUUC-Opr-070350	Ochotona princeps	75.00	2.00e-74	273.00
IUUC-Oan-072703	Ornithorhynchus anatinus	49.20	9.00e-141	493.00
IUUC-Ola-086816	Oryzias latipes	55.80	3.00e-74	271.00
IUUC-Ptr-091676	Pan troglodytes	50.73	2.00e-142	499.00
IUUC-Psi-093367	Pelodiscus sinensis	51.57	2.00e-145	509.00
IUUC-Pfo-096067	Poecilia formosa	46.35	3.00e-137	482.00
IUUC-Pca-100680	Procavia capensis	55.30	1.00e-65	244.00
IUUC-Sha-106984	Sarcophilus harrisii	50.42	5.00e-141	494.00
IUUC-Ssc-116241	Sus scrofa	49.58	5.00e-130	457.00
IUUC-Tgu-116576	Taeniopygia guttata	50.65	2.00e-145	509.00
IUUC-Tru-118336	Takifugu rubripes	66.35	3.00e-72	266.00
IUUC-Tni-120300	Tetraodon nigroviridis	47.73	1.00e-137	483.00
IUUC-Tbe-127631	Tupaia belangeri	48.28	1.00e-104	373.00
IUUC-Ttr-129005	Tursiops truncatus	75.58	1.00e-75	277.00
IUUC-Vpa-130246	Vicugna pacos	69.46	1.00e-69	256.00
IUUC-Xtr-132798	Xenopus tropicalis	45.87	3.00e-115	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence