iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-131838

UUCD1 version

UUC-XeT-00910

Ensembl Protein ID

ENSXETP00000046706.2

UniProt Accession

Q28IR7; Q28IR7_XENTR

Genbank Protein ID

AAI59017.1; AAI59060.1; AAI70824.1; AAI70854.1; CAJ82427.1

Protein Name

WD repeat domain 18

Genbank Nucleotide ID

AAMC01070058; BC159059; BC170824; BC170854; CR760263

Gene Name

wdr18; TNeu112j12.1-001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000021612.2	ENSXETT00000046706.2	ENSXETP00000046706.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-22	76.4	265	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH + vtcl+   d  +l+sGs+D t+ vWD+++  +l++
   Q: 265  GHRNQVTCLSVsLDgSMLISGSHDETVCVWDIHSKQCLRT 304
           8*******99995669*****************9999875 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MAAPMELVLS ADATGQVANC TVWEPVTGSV LLTYRGGNTS NRGLAVLGGQ YLLGAQLGKN 60
YINVWELQRR DQLQQKIVCP GPVNCLATSP NGLYLVSGIA ESIYLWEVCT GRLLAILNNH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCACGTGG TGTAGAAGCC ATCCCTGCCC TGTTACCACG TGACTTTCCG CTCTGACTAA 60
ACATGGCGGC GCCCATGGAG CTAGTGCTTA GCGCTGACGC TACAGGACAA GTTGCAAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR026987--Wdr18_C_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40
PF14077--WD40_alt

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0007368--P:determination of left/right symmetry
GO:0070121--P:Kupffer's vesicle development

KEGG

xtr:496904

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001040	Aegilops tauschii	32.26	1.00e-31	130.00
IUUC-Aml-001819	Ailuropoda melanoleuca	64.34	1.00e-148	518.00
IUUC-Atr-002808	Amborella trichopoda	33.94	6.00e-36	145.00
IUUC-Apl-004023	Anas platyrhynchos	53.91	3.00e-97	347.00
IUUC-Aca-004879	Anolis carolinensis	62.28	2.00e-49	187.00
IUUC-Aly-006061	Arabidopsis lyrata	33.77	1.00e-41	163.00
IUUC-Ath-007111	Arabidopsis thaliana	34.20	1.00e-41	164.00
IUUC-Acl-008357	Aspergillus clavatus	28.12	2.00e-27	116.00
IUUC-Afl-008564	Aspergillus flavus	28.57	5.00e-26	112.00
IUUC-Afu-009113	Aspergillus fumigatus	28.14	6.00e-27	115.00
IUUC-Ang-009586	Aspergillus niger	28.57	6.00e-26	111.00
IUUC-Aor-009882	Aspergillus oryzae	28.57	6.00e-26	112.00
IUUC-Ate-010249	Aspergillus terreus	28.17	2.00e-27	117.00
IUUC-Ame-010912	Astyanax mexicanus	61.77	2.00e-161	561.00
IUUC-Bgr-012242	Blumeria graminis	26.34	2.00e-20	93.20
IUUC-Bta-013402	Bos taurus	64.02	2.00e-149	521.00
IUUC-Bdi-015054	Brachypodium distachyon	33.03	2.00e-38	153.00
IUUC-Bol-016342	Brassica oleracea	30.61	1.00e-37	150.00
IUUC-Bra-016967	Brassica rapa	30.91	7.00e-38	151.00
IUUC-Cja-019758	Callithrix jacchus	63.70	1.00e-141	496.00
IUUC-Cfa-020495	Canis familiaris	65.28	2.00e-130	458.00
IUUC-Cpo-021438	Cavia porcellus	67.61	9.00e-131	459.00
IUUC-Csa-023416	Chlorocebus sabaeus	63.64	2.00e-149	521.00
IUUC-Csv-025918	Ciona savignyi	33.26	2.00e-61	229.00
IUUC-Cgl-026618	Colletotrichum gloeosporioides	28.42	4.00e-21	95.90
IUUC-Cne-026843	Cryptococcus neoformans	30.59	1.00e-21	97.40
IUUC-Dre-027560	Danio rerio	61.31	3.00e-162	564.00
IUUC-Dno-029315	Dasypus novemcinctus	63.64	9.00e-158	549.00
IUUC-Dor-030935	Dipodomys ordii	62.70	5.00e-157	546.00
IUUC-Dse-031492	Dothistroma septosporum	26.47	2.00e-24	106.00
IUUC-Dme-032059	Drosophila melanogaster	35.99	5.00e-63	234.00
IUUC-Fca-036068	Felis catus	61.96	3.00e-140	491.00
IUUC-Fal-037467	Ficedula albicollis	65.49	4.00e-144	503.00
IUUC-Fox-037903	Fusarium oxysporum	27.92	3.00e-26	112.00
IUUC-Gmo-039323	Gadus morhua	51.40	2.00e-111	395.00
IUUC-Ggr-040050	Gaeumannomyces graminis	28.42	7.00e-14	71.60
IUUC-Gga-040563	Gallus gallus	66.32	3.00e-136	478.00
IUUC-Gac-042641	Gasterosteus aculeatus	57.14	2.00e-144	504.00
IUUC-Gma-044265	Glycine max	31.36	2.00e-43	169.00
IUUC-Ggo-045137	Gorilla gorilla	64.57	1.00e-145	509.00
IUUC-Hsa-046335	Homo sapiens	64.57	9.00e-146	509.00
IUUC-Hvu-047685	Hordeum vulgare	33.13	6.00e-36	144.00
IUUC-Itr-048032	Ictidomys tridecemlineatus	64.34	1.00e-164	572.00
IUUC-Kpa-049129	Komagataella pastoris	29.78	9.00e-33	134.00
IUUC-Lch-049532	Latimeria chalumnae	63.26	2.00e-169	588.00
IUUC-Lpe-051321	Leersia perrieri	31.33	3.00e-31	129.00
IUUC-Loc-052471	Lepisosteus oculatus	58.93	2.00e-150	525.00
IUUC-Lma-053091	Leptosphaeria maculans	25.71	5.00e-29	122.00
IUUC-Laf-054331	Loxodonta africana	61.54	1.00e-141	496.00
IUUC-Mcc-055803	Macaca mulatta	63.64	2.00e-149	521.00
IUUC-Meu-056090	Macropus eugenii	64.57	1.00e-167	582.00
IUUC-Mor-057160	Magnaporthe oryzae	27.83	2.00e-21	96.70
IUUC-Mtr-058800	Medicago truncatula	34.66	3.00e-47	182.00
IUUC-Mla-058943	Melampsora laricipopulina	35.36	3.00e-26	113.00
IUUC-Mga-059282	Meleagris gallopavo	61.93	8.00e-127	446.00
IUUC-Mvi-060315	Microbotryum violaceum	35.16	6.00e-30	125.00
IUUC-Mmr-061127	Microcebus murinus	64.88	2.00e-154	538.00
IUUC-Mdo-062350	Monodelphis domestica	64.80	5.00e-168	583.00
IUUC-Mmu-063706	Mus musculus	62.94	1.00e-153	536.00
IUUC-Mac-065554	Musa acuminata	29.85	4.00e-31	129.00
IUUC-Mpu-066711	Mustela putorius furo	63.64	4.00e-164	570.00
IUUC-Mlu-068121	Myotis lucifugus	65.74	1.00e-125	442.00
IUUC-Nfi-068454	Neosartorya fischeri	28.14	1.00e-26	114.00
IUUC-Ncr-068914	Neurospora crassa	28.12	2.00e-20	93.20
IUUC-Nle-069518	Nomascus leucogenys	65.98	2.00e-139	488.00
IUUC-Ont-071435	Oreochromis niloticus	60.84	4.00e-154	537.00
IUUC-Oan-073532	Ornithorhynchus anatinus	58.65	9.00e-32	127.00
IUUC-Oba-075873	Oryza barthii	34.15	1.00e-42	167.00
IUUC-Obr-076097	Oryza brachyantha	30.86	2.00e-32	133.00
IUUC-Ogl-077840	Oryza glaberrima	34.15	8.00e-43	167.00
IUUC-Ogu-077988	Oryza glumaepatula	34.15	1.00e-42	167.00
IUUC-Oin-079237	Oryza indica	36.28	8.00e-30	124.00
IUUC-Olo-080415	Oryza longistaminata	32.34	1.00e-33	138.00
IUUC-Ome-081952	Oryza meridionalis	33.23	2.00e-40	159.00
IUUC-Oni-082300	Oryza nivara	34.15	1.00e-42	167.00
IUUC-Opu-083436	Oryza punctata	37.32	2.00e-27	117.00
IUUC-Oru-085164	Oryza rufipogon	34.15	2.00e-42	166.00
IUUC-Osa-086129	Oryza sativa	33.74	2.00e-42	166.00
IUUC-Ola-086571	Oryzias latipes	56.64	2.00e-140	492.00
IUUC-Oga-088561	Otolemur garnettii	63.64	2.00e-155	541.00
IUUC-Oar-090131	Ovis aries	56.64	1.00e-119	422.00
IUUC-Ptr-091301	Pan troglodytes	52.30	4.00e-120	424.00
IUUC-Pan-092810	Papio anubis	63.40	7.00e-149	520.00
IUUC-Psi-093091	Pelodiscus sinensis	58.63	1.00e-110	392.00
IUUC-Pno-095047	Phaeosphaeria nodorum	25.25	2.00e-23	103.00
IUUC-Ppa-095317	Physcomitrella patens	38.71	2.00e-41	163.00
IUUC-Pfo-096996	Poecilia formosa	57.34	2.00e-139	488.00
IUUC-Pab-097747	Pongo abelii	65.45	6.00e-147	513.00
IUUC-Pop-099609	Populus trichocarpa	32.52	2.00e-42	166.00
IUUC-Pca-100972	Procavia capensis	62.00	2.00e-129	455.00
IUUC-Ppe-101904	Prunus persica	34.58	4.00e-46	178.00
IUUC-Pva-102700	Pteropus vampyrus	70.39	4.00e-83	301.00
IUUC-Pgr-103616	Puccinia graminis	37.29	2.00e-26	113.00
IUUC-Ptt-103954	Puccinia triticina	35.59	1.00e-24	107.00
IUUC-Pte-104120	Pyrenophora teres	27.57	5.00e-31	129.00
IUUC-Pyt-104558	Pyrenophora triticirepentis	26.59	2.00e-30	126.00
IUUC-Rno-104933	Rattus norvegicus	62.24	8.00e-151	526.00
IUUC-Sce-106403	Saccharomyces cerevisiae	23.71	2.00e-21	97.10
IUUC-Sha-107636	Sarcophilus harrisii	65.50	9.00e-169	586.00
IUUC-Sja-107783	Schizosaccharomyces japonicus	33.96	3.00e-37	149.00
IUUC-Spo-108192	Schizosaccharomyces pombe	25.80	6.00e-26	111.00
IUUC-Smo-109066	Selaginella moellendorffii	38.62	5.00e-45	175.00
IUUC-Sit-110770	Setaria italica	34.19	1.00e-39	157.00
IUUC-Sly-111453	Solanum lycopersicum	36.45	8.00e-48	184.00
IUUC-Stu-112384	Solanum tuberosum	36.14	4.00e-48	186.00
IUUC-Sbi-113952	Sorghum bicolor	33.55	4.00e-39	155.00
IUUC-Sre-115223	Sporisorium reilianum	29.86	4.00e-30	126.00
IUUC-Ssc-115627	Sus scrofa	64.19	5.00e-152	530.00
IUUC-Tgu-117404	Taeniopygia guttata	65.63	8.00e-138	483.00
IUUC-Tru-117629	Takifugu rubripes	59.95	4.00e-133	467.00
IUUC-Tni-119839	Tetraodon nigroviridis	56.48	7.00e-125	440.00
IUUC-Tca-121766	Theobroma cacao	33.73	9.00e-46	177.00
IUUC-Tre-122047	Trichoderma reesei	26.98	1.00e-21	97.40
IUUC-Tae-125258	Triticum aestivum	32.42	6.00e-31	128.00
IUUC-Tur-126673	Triticum urartu	30.63	2.00e-27	116.00
IUUC-Tme-127070	Tuber melanosporum	27.38	1.00e-28	120.00
IUUC-Tbe-127452	Tupaia belangeri	60.43	5.00e-74	271.00
IUUC-Ttr-128735	Tursiops truncatus	62.24	2.00e-142	498.00
IUUC-Uma-129521	Ustilago maydis	30.22	5.00e-30	125.00
IUUC-Vvi-130872	Vitis vinifera	34.26	5.00e-43	168.00
IUUC-Xma-134106	Xiphophorus maculatus	63.67	3.00e-114	404.00
IUUC-Yli-134551	Yarrowia lipolytica	28.93	8.00e-28	117.00
IUUC-Zma-134703	Zea mays	33.55	5.00e-39	155.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence