iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069240

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01047960

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000008108.2	ENSNLET00000010366.2	ENSNLEP00000009885.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.50e-16	60.0	179	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 179  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 226
           67899.**********************888...***************976 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MGSQGSPVKS YDYLLKFLLV GDSDVGKGEI LESLQDGAAE SPYAYSNGID YKTTTILLDG 60
RRVKLELWVG AAALQFLALV TPKSLLQGIL LVYDITNRWS FDGIDRWIKE IDEHAPGVPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCACGCCG CGGCCTCTCC CGGTGGTGCC TCGGCAGGCG GCCGGCGCGG GGCGCAGGCG 60
TTGCGGCCAT GGGCTCGCAG GGCAGTCCGG TGAAGAGCTA CGACTATCTG CTCAAGTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	91.82	7.00e-129	452.00
IUUC-Apl-003799	Anas platyrhynchos	83.27	3.00e-116	410.00
IUUC-Bta-013490	Bos taurus	93.59	4.00e-138	483.00
IUUC-Cja-019990	Callithrix jacchus	93.26	6.00e-137	479.00
IUUC-Cpo-022437	Cavia porcellus	92.28	2.00e-129	455.00
IUUC-Csa-024147	Chlorocebus sabaeus	93.95	2.00e-138	484.00
IUUC-Dre-027427	Danio rerio	87.54	3.00e-139	487.00
IUUC-Dno-029998	Dasypus novemcinctus	85.59	2.00e-102	367.00
IUUC-Dor-030584	Dipodomys ordii	89.70	5.00e-108	383.00
IUUC-Ete-033080	Echinops telfairi	90.75	1.00e-129	455.00
IUUC-Eca-033423	Equus caballus	91.88	8.00e-113	399.00
IUUC-Eeu-034590	Erinaceus europaeus	86.27	1.00e-105	375.00
IUUC-Fal-037070	Ficedula albicollis	91.46	2.00e-137	481.00
IUUC-Gmo-039605	Gadus morhua	86.48	1.00e-137	481.00
IUUC-Gga-040343	Gallus gallus	91.46	2.00e-137	481.00
IUUC-Gac-041833	Gasterosteus aculeatus	81.12	2.00e-130	457.00
IUUC-Ggo-045131	Gorilla gorilla	92.86	1.00e-134	471.00
IUUC-Hsa-046237	Homo sapiens	93.95	2.00e-138	484.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	92.88	4.00e-138	483.00
IUUC-Lch-050193	Latimeria chalumnae	88.97	3.00e-140	490.00
IUUC-Loc-052243	Lepisosteus oculatus	87.54	3.00e-139	487.00
IUUC-Laf-054435	Loxodonta africana	91.10	5.00e-137	479.00
IUUC-Mcc-055337	Macaca mulatta	93.59	2.00e-137	481.00
IUUC-Meu-056731	Macropus eugenii	97.60	9.00e-81	293.00
IUUC-Mmr-061380	Microcebus murinus	93.19	9.00e-137	479.00
IUUC-Mdo-062438	Monodelphis domestica	91.46	3.00e-137	480.00
IUUC-Mmu-064046	Mus musculus	93.24	4.00e-138	483.00
IUUC-Mpu-066029	Mustela putorius furo	87.18	9.00e-110	389.00
IUUC-Mlu-067741	Myotis lucifugus	93.24	1.00e-137	481.00
IUUC-Ont-071248	Oreochromis niloticus	88.26	2.00e-139	488.00
IUUC-Oan-073432	Ornithorhynchus anatinus	90.99	1.00e-108	385.00
IUUC-Oga-088293	Otolemur garnettii	93.24	4.00e-138	483.00
IUUC-Ptr-090720	Pan troglodytes	93.95	2.00e-138	484.00
IUUC-Pan-091732	Papio anubis	93.95	2.00e-138	484.00
IUUC-Psi-093627	Pelodiscus sinensis	90.04	2.00e-129	454.00
IUUC-Pfo-097105	Poecilia formosa	87.19	1.00e-138	485.00
IUUC-Pab-098054	Pongo abelii	93.95	2.00e-138	484.00
IUUC-Pca-100775	Procavia capensis	97.93	4.00e-90	323.00
IUUC-Pva-102658	Pteropus vampyrus	92.88	7.00e-137	479.00
IUUC-Rno-105303	Rattus norvegicus	93.24	4.00e-138	483.00
IUUC-Sha-106536	Sarcophilus harrisii	91.46	3.00e-137	480.00
IUUC-Tgu-116858	Taeniopygia guttata	90.16	1.00e-100	358.00
IUUC-Tni-120350	Tetraodon nigroviridis	87.19	4.00e-138	483.00
IUUC-Ttr-129236	Tursiops truncatus	93.24	1.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence