iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121098

Ensembl Protein ID

EOY06690

UniProt Accession

A0A061EWT0; A0A061EWT0_THECC

Genbank Protein ID

EOY06689.1; EOY06690.1

Protein Name

WD40/YVTN repeat-like-containing domain,Bromodomain isoform 1

Genbank Nucleotide ID

CM001882; CM001882

Gene Name

TCM_021341

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021341	EOY06690	EOY06690

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-26	92.2	325	359
UBD/Beta-Prp	3.80e-43	148.7	237	497

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDl 30
           gHt+ vt++af   ++    l+s+sdDgt+++WD 
   Q: 325  GHTGAVTAIAFsprPGsvYQLLSSSDDGTCRIWDA 359
           8***********99555577**************5 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           k l+gh+ +v +   f +++++++tgs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+  v++++fs
   Q: 237  KRLRGHRNAVYC-AIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNIMVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
           566777776665.8999********************************************988899999******************************* PP
   S: 104  p...sgdklvsGshdrtirvwdletgqclee...................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.........ktgkllr 173
           p   s + l+s s+d t r+wd ++ +                       t  ++++ + c +++ +g ++v+Gs D+  r+W+          + +  ++
   Q: 337  PrpgSVYQLLSSSDDGTCRIWDARNAEFRPRiyvprpsdsvagknngsssTAVQQSHQIFCCAFNANGTVFVTGSSDTLARVWNAckpntddsdQPNHEID 437
           *9877799****************9999988999***************98888888899999***99***************999999997765556666 PP
   S: 174  tltgghtdsvyslsfdsng..........................kelvsgsldgtvklwd 208
            l g h+++v+ ++f+  +                            +v++s+dg+ ++w 
   Q: 438  VLAG-HENDVNYVQFSGCSvssrfftvdslkeesvpkfrnswfshDNIVTCSRDGSAIIWI 497
           6676.*********877777778888888899999999999999999**********9995 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MALQKYVPSS DSPKVKMKPL SFSSKVQEKV QLANLETRHS KKHDVDVDLR EVYFLIMHFL 60
STGPCKRTCG MFLNELLENQ LLPRRYHAWY SRKGAHSGHE NDDGMSFPLS YAQLVERNPH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTCTCT TTCGTTTAAG AATCCCCCTT CTCTCTCTAA ACCCCAACAG AAACACACAC 60
AGAGCTCCCT CCGAGAATCT AAAATTCTTC ATCTCGCGCG TGCTCCTCAC TCGCTATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002600	Amborella trichopoda	62.52	0.00e+00	1199.00
IUUC-Aly-006406	Arabidopsis lyrata	57.60	0.00e+00	1621.00
IUUC-Ath-006801	Arabidopsis thaliana	57.71	0.00e+00	1636.00
IUUC-Bta-013217	Bos taurus	31.26	2.00e-75	278.00
IUUC-Bol-015737	Brassica oleracea	57.21	0.00e+00	1633.00
IUUC-Bra-017961	Brassica rapa	56.75	0.00e+00	1627.00
IUUC-Cho-024690	Choloepus hoffmanni	27.57	4.00e-34	140.00
IUUC-Dor-031052	Dipodomys ordii	28.88	2.00e-39	158.00
IUUC-Eca-034349	Equus caballus	31.25	2.00e-69	257.00
IUUC-Gmo-039116	Gadus morhua	28.04	6.00e-23	103.00
IUUC-Gac-042435	Gasterosteus aculeatus	30.83	3.00e-63	237.00
IUUC-Gma-043340	Glycine max	60.23	0.00e+00	1859.00
IUUC-Ggo-045500	Gorilla gorilla	31.26	2.00e-75	278.00
IUUC-Hvu-047706	Hordeum vulgare	77.40	9.00e-147	511.00
IUUC-Lpe-051619	Leersia perrieri	50.61	0.00e+00	1338.00
IUUC-Mtr-058094	Medicago truncatula	59.17	0.00e+00	1794.00
IUUC-Nle-069402	Nomascus leucogenys	31.26	6.00e-75	276.00
IUUC-Opr-070971	Ochotona princeps	27.33	3.00e-38	154.00
IUUC-Ocu-074456	Oryctolagus cuniculus	31.25	3.00e-70	260.00
IUUC-Ogu-078641	Oryza glumaepatula	47.10	0.00e+00	1020.00
IUUC-Oin-079669	Oryza indica	71.20	0.00e+00	737.00
IUUC-Ptr-091213	Pan troglodytes	31.26	2.00e-75	278.00
IUUC-Psi-093271	Pelodiscus sinensis	32.98	3.00e-69	257.00
IUUC-Pab-097573	Pongo abelii	31.00	5.00e-73	270.00
IUUC-Pop-099185	Populus trichocarpa	65.86	0.00e+00	2035.00
IUUC-Ppe-101849	Prunus persica	62.40	0.00e+00	1952.00
IUUC-Tbe-127479	Tupaia belangeri	39.56	2.00e-31	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence