iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gac-042214

Ensembl Protein ID

ENSGACP00000024241.1

UniProt Accession

G3Q2Z2; G3Q2Z2_GASAC

Protein Name

Uncharacterized protein

Gene Name

LDB1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000018336.1	ENSGACT00000024289.1	ENSGACP00000024241.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	61.89	2.00e-127	452.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

NSFFTSLTGC SSKSFKLYSP KEPPNGSTFP PFHPGTMLDR DVGPTPMYPP TYLEPGIGRH 60
TPYGNQTDYR IFELNKRLQN WTEECDNLWW DAFTTEFFED DAMLTITFCL EDGPKRYTIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCTTTCT TCACCTCTCT TACAGGCTGT TCCTCCAAGT CATTCAAGCT GTACTCCCCC 60
AAGGAGCCCC CCAACGGTAG CACTTTCCCC CCTTTCCACC CCGGCACTAT GCTGGACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.30	2.00e-04	41.60
IUUC-Aml-002031	Ailuropoda melanoleuca	89.71	0.00e+00	709.00
IUUC-Atr-003083	Amborella trichopoda	24.11	6.00e-04	40.00
IUUC-Apl-004210	Anas platyrhynchos	89.25	1.00e-171	595.00
IUUC-Aca-005241	Anolis carolinensis	91.63	0.00e+00	730.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	4.00e-06	47.00
IUUC-Ath-007339	Arabidopsis thaliana	25.00	4.00e-06	47.40
IUUC-Acl-008255	Aspergillus clavatus	20.63	9.00e-06	45.80
IUUC-Ate-010596	Aspergillus terreus	20.18	3.00e-05	43.90
IUUC-Ame-010910	Astyanax mexicanus	92.86	0.00e+00	725.00
IUUC-Bgr-012180	Blumeria graminis	21.83	8.00e-07	49.30
IUUC-Bta-012596	Bos taurus	71.11	7.00e-149	520.00
IUUC-Bci-013927	Botrytis cinerea	26.03	2.00e-06	48.10
IUUC-Bol-015721	Brassica oleracea	25.53	1.00e-06	48.90
IUUC-Bra-017183	Brassica rapa	25.53	9.00e-07	48.90
IUUC-Cel-018189	Caenorhabditis elegans	33.62	5.00e-31	129.00
IUUC-Cja-019586	Callithrix jacchus	73.39	6.00e-156	543.00
IUUC-Cfa-021188	Canis familiaris	89.71	0.00e+00	707.00
IUUC-Cpo-022350	Cavia porcellus	90.39	0.00e+00	716.00
IUUC-Csa-023816	Chlorocebus sabaeus	90.64	0.00e+00	722.00
IUUC-Cho-024958	Choloepus hoffmanni	60.10	5.00e-64	238.00
IUUC-Cin-025721	Ciona intestinalis	51.58	4.00e-88	317.00
IUUC-Csv-026065	Ciona savignyi	54.37	7.00e-92	330.00
IUUC-Dre-027356	Danio rerio	68.80	5.00e-147	513.00
IUUC-Dno-029918	Dasypus novemcinctus	90.50	0.00e+00	690.00
IUUC-Dor-030634	Dipodomys ordii	90.48	0.00e+00	667.00
IUUC-Dse-031245	Dothistroma septosporum	24.00	4.00e-04	40.40
IUUC-Dme-031667	Drosophila melanogaster	62.50	1.00e-122	433.00
IUUC-Ete-032246	Echinops telfairi	71.43	7.00e-151	526.00
IUUC-Eca-034015	Equus caballus	72.58	1.00e-155	542.00
IUUC-Eeu-034902	Erinaceus europaeus	90.48	0.00e+00	667.00
IUUC-Fca-035903	Felis catus	89.18	0.00e+00	721.00
IUUC-Fal-037407	Ficedula albicollis	74.09	1.00e-149	522.00
IUUC-Gmo-039466	Gadus morhua	96.95	0.00e+00	780.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.08	4.00e-03	37.00
IUUC-Gga-040214	Gallus gallus	91.13	0.00e+00	721.00
IUUC-Gma-042794	Glycine max	24.53	5.00e-07	50.40
IUUC-Ggo-044988	Gorilla gorilla	72.58	4.00e-156	543.00
IUUC-Hsa-046092	Homo sapiens	72.30	3.00e-153	534.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	90.64	0.00e+00	722.00
IUUC-Lch-049895	Latimeria chalumnae	74.50	2.00e-96	344.00
IUUC-Lpe-050806	Leersia perrieri	25.35	4.00e-06	47.00
IUUC-Loc-052845	Lepisosteus oculatus	92.12	0.00e+00	738.00
IUUC-Lma-053090	Leptosphaeria maculans	24.22	3.00e-04	40.40
IUUC-Laf-054538	Loxodonta africana	87.30	6.00e-178	616.00
IUUC-Mcc-055116	Macaca mulatta	68.37	6.00e-117	413.00
IUUC-Meu-056777	Macropus eugenii	86.24	2.00e-177	614.00
IUUC-Mpo-057376	Magnaporthe poae	23.72	3.00e-03	37.70
IUUC-Mtr-058142	Medicago truncatula	24.53	6.00e-07	50.10
IUUC-Mga-059716	Meleagris gallopavo	73.54	9.00e-149	519.00
IUUC-Mmr-060649	Microcebus murinus	72.30	1.00e-154	538.00
IUUC-Mdo-062535	Monodelphis domestica	72.58	2.00e-153	535.00
IUUC-Mmu-064036	Mus musculus	71.75	2.00e-152	531.00
IUUC-Mac-065338	Musa acuminata	22.67	2.00e-05	45.10
IUUC-Mpu-065719	Mustela putorius furo	90.64	0.00e+00	722.00
IUUC-Mlu-067219	Myotis lucifugus	88.38	0.00e+00	707.00
IUUC-Ncr-068691	Neurospora crassa	22.73	5.00e-05	43.10
IUUC-Nle-068983	Nomascus leucogenys	73.39	1.00e-156	545.00
IUUC-Opr-070467	Ochotona princeps	90.48	0.00e+00	667.00
IUUC-Ont-071566	Oreochromis niloticus	94.15	0.00e+00	772.00
IUUC-Oan-073368	Ornithorhynchus anatinus	91.27	0.00e+00	664.00
IUUC-Ocu-074854	Oryctolagus cuniculus	73.41	3.00e-157	547.00
IUUC-Ome-081687	Oryza meridionalis	26.22	1.00e-03	38.50
IUUC-Ola-086364	Oryzias latipes	93.63	0.00e+00	766.00
IUUC-Oga-088235	Otolemur garnettii	72.02	4.00e-152	530.00
IUUC-Oar-089547	Ovis aries	89.71	0.00e+00	708.00
IUUC-Ptr-091423	Pan troglodytes	72.85	6.00e-156	543.00
IUUC-Pan-092378	Papio anubis	90.48	0.00e+00	667.00
IUUC-Psi-093638	Pelodiscus sinensis	72.30	6.00e-151	526.00
IUUC-Pma-094384	Petromyzon marinus	60.67	7.00e-48	182.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.66	7.00e-04	39.30
IUUC-Pfo-096031	Poecilia formosa	98.38	0.00e+00	720.00
IUUC-Pab-097886	Pongo abelii	73.39	1.00e-156	545.00
IUUC-Pop-099430	Populus trichocarpa	24.85	2.00e-06	48.10
IUUC-Pca-101138	Procavia capensis	90.48	0.00e+00	667.00
IUUC-Ppe-101293	Prunus persica	28.10	1.00e-06	48.50
IUUC-Pva-103215	Pteropus vampyrus	72.58	9.00e-156	542.00
IUUC-Pte-104238	Pyrenophora teres	24.41	1.00e-03	37.70
IUUC-Rno-105968	Rattus norvegicus	72.02	1.00e-152	532.00
IUUC-Sha-107595	Sarcophilus harrisii	91.00	0.00e+00	700.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	23.36	6.00e-06	46.20
IUUC-Smo-109552	Selaginella moellendorffii	20.00	9.00e-04	39.30
IUUC-Sly-110873	Solanum lycopersicum	27.87	3.00e-06	47.40
IUUC-Stu-112586	Solanum tuberosum	20.85	1.20e-02	35.40
IUUC-Sar-113076	Sorex araneus	72.46	3.00e-101	361.00
IUUC-Sre-115143	Sporisorium reilianum	18.89	9.00e-03	35.80
IUUC-Ssc-115755	Sus scrofa	89.95	0.00e+00	658.00
IUUC-Tgu-117326	Taeniopygia guttata	73.82	3.00e-149	521.00
IUUC-Tru-117858	Takifugu rubripes	72.58	1.00e-153	535.00
IUUC-Tsy-119296	Tarsius syrichta	66.48	1.00e-136	479.00
IUUC-Tni-119822	Tetraodon nigroviridis	97.14	0.00e+00	648.00
IUUC-Tca-120935	Theobroma cacao	24.53	7.00e-07	49.70
IUUC-Tbe-127366	Tupaia belangeri	88.89	0.00e+00	642.00
IUUC-Ttr-128484	Tursiops truncatus	72.89	3.00e-144	504.00
IUUC-Vpa-130304	Vicugna pacos	70.18	2.00e-116	412.00
IUUC-Vvi-131560	Vitis vinifera	28.57	3.00e-06	47.80
IUUC-Xtr-132062	Xenopus tropicalis	91.53	0.00e+00	670.00
IUUC-Xma-134288	Xiphophorus maculatus	94.58	0.00e+00	770.00
IUUC-Yli-134374	Yarrowia lipolytica	19.02	1.00e-05	44.70
IUUC-Zma-135310	Zea mays	23.16	2.00e-04	41.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence