iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001693

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01148939

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000005505.1	ENSAMET00000006069.1	ENSAMEP00000005825.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-14	51.3	166	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + +++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAKEVQT 205
           8**********98559******************998875 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MERAVPHAVP LGQMEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAV FSLSAALSSE 60
AKEESKKPVV TFQAHDGPVY SMVSTDRHLL SAGDGEVKAW LWAEILKKGC KELWRRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCGAG CTGTGCCACA CGCCGTACCT CTGGGTCAGG TGAGGCGGGC GTGGTGCGCG 60
GTGCCTTCTG GGGTTTGTAG TGTATGCCCG GCTCGGAAGG GGCAGGAGGG AGGGTAACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

KEGG

aml:100476687

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.84	3.00e-29	122.00
IUUC-Atr-002699	Amborella trichopoda	29.60	1.00e-23	103.00
IUUC-Aca-004231	Anolis carolinensis	70.43	8.00e-128	449.00
IUUC-Aly-006385	Arabidopsis lyrata	29.90	7.00e-28	117.00
IUUC-Ath-006723	Arabidopsis thaliana	29.37	4.00e-28	118.00
IUUC-Ame-010813	Astyanax mexicanus	64.19	2.00e-88	318.00
IUUC-Bta-013458	Bos taurus	96.19	6.00e-179	619.00
IUUC-Bdi-014935	Brachypodium distachyon	29.44	3.00e-29	122.00
IUUC-Bol-015442	Brassica oleracea	29.75	4.00e-28	119.00
IUUC-Bra-017807	Brassica rapa	30.41	2.00e-28	119.00
IUUC-Cja-019061	Callithrix jacchus	96.20	1.00e-178	618.00
IUUC-Cfa-021146	Canis familiaris	97.07	0.00e+00	630.00
IUUC-Cpo-022512	Cavia porcellus	95.31	8.00e-179	619.00
IUUC-Csa-023055	Chlorocebus sabaeus	96.19	1.00e-180	625.00
IUUC-Cho-024693	Choloepus hoffmanni	97.42	6.00e-101	359.00
IUUC-Cin-025181	Ciona intestinalis	36.65	2.00e-58	219.00
IUUC-Csv-025852	Ciona savignyi	35.33	2.00e-50	192.00
IUUC-Dre-028221	Danio rerio	60.25	2.00e-118	418.00
IUUC-Dno-029200	Dasypus novemcinctus	91.53	5.00e-89	319.00
IUUC-Dor-030863	Dipodomys ordii	94.13	1.00e-175	608.00
IUUC-Dme-032016	Drosophila melanogaster	29.38	1.00e-37	149.00
IUUC-Eca-034363	Equus caballus	98.24	0.00e+00	636.00
IUUC-Fca-036546	Felis catus	97.07	0.00e+00	629.00
IUUC-Gmo-038513	Gadus morhua	58.57	7.00e-109	386.00
IUUC-Gac-042606	Gasterosteus aculeatus	57.45	9.00e-112	396.00
IUUC-Gma-043171	Glycine max	28.19	1.00e-31	130.00
IUUC-Ggo-044877	Gorilla gorilla	97.36	0.00e+00	629.00
IUUC-Hsa-045813	Homo sapiens	96.77	0.00e+00	629.00
IUUC-Hvu-047782	Hordeum vulgare	31.08	3.00e-20	91.30
IUUC-Itr-047876	Ictidomys tridecemlineatus	95.89	2.00e-179	620.00
IUUC-Lch-049506	Latimeria chalumnae	64.44	2.00e-119	422.00
IUUC-Lpe-051203	Leersia perrieri	29.83	2.00e-24	106.00
IUUC-Loc-052451	Lepisosteus oculatus	51.23	1.00e-89	323.00
IUUC-Laf-053864	Loxodonta africana	95.89	2.00e-179	620.00
IUUC-Mcc-055705	Macaca mulatta	88.62	3.00e-153	534.00
IUUC-Meu-055926	Macropus eugenii	91.77	1.00e-157	548.00
IUUC-Mtr-058556	Medicago truncatula	28.83	6.00e-32	131.00
IUUC-Mmr-060836	Microcebus murinus	96.19	3.00e-180	624.00
IUUC-Mdo-062534	Monodelphis domestica	91.46	8.00e-157	546.00
IUUC-Mmu-063560	Mus musculus	95.89	1.00e-179	621.00
IUUC-Mac-065134	Musa acuminata	27.82	8.00e-26	111.00
IUUC-Mpu-066031	Mustela putorius furo	98.53	0.00e+00	639.00
IUUC-Mlu-068051	Myotis lucifugus	93.55	1.00e-172	598.00
IUUC-Nle-069080	Nomascus leucogenys	96.19	3.00e-180	624.00
IUUC-Opr-070787	Ochotona princeps	92.38	2.00e-169	587.00
IUUC-Ont-071952	Oreochromis niloticus	56.21	1.00e-110	392.00
IUUC-Oan-073334	Ornithorhynchus anatinus	86.92	4.00e-120	423.00
IUUC-Oba-075175	Oryza barthii	30.39	2.00e-25	109.00
IUUC-Obr-076393	Oryza brachyantha	30.94	3.00e-25	109.00
IUUC-Ogl-077603	Oryza glaberrima	35.59	1.00e-18	87.00
IUUC-Ogu-078211	Oryza glumaepatula	30.39	2.00e-25	109.00
IUUC-Oin-079554	Oryza indica	30.39	1.00e-25	110.00
IUUC-Olo-080922	Oryza longistaminata	32.48	4.00e-23	102.00
IUUC-Ome-081127	Oryza meridionalis	23.76	2.00e-12	67.00
IUUC-Oni-082376	Oryza nivara	30.39	2.00e-25	109.00
IUUC-Opu-083163	Oryza punctata	29.83	7.00e-25	108.00
IUUC-Oru-084311	Oryza rufipogon	30.39	4.00e-25	108.00
IUUC-Osa-085762	Oryza sativa	35.59	1.00e-18	86.30
IUUC-Oga-088804	Otolemur garnettii	95.31	2.00e-179	621.00
IUUC-Oar-090095	Ovis aries	95.60	4.00e-178	616.00
IUUC-Ptr-090731	Pan troglodytes	97.07	0.00e+00	629.00
IUUC-Pan-092595	Papio anubis	96.78	7.00e-180	622.00
IUUC-Psi-093866	Pelodiscus sinensis	70.96	9.00e-118	416.00
IUUC-Pma-094236	Petromyzon marinus	60.19	3.00e-116	411.00
IUUC-Pfo-096095	Poecilia formosa	57.45	5.00e-108	383.00
IUUC-Pab-098385	Pongo abelii	96.77	0.00e+00	627.00
IUUC-Pop-099433	Populus trichocarpa	26.03	6.00e-29	121.00
IUUC-Pca-101119	Procavia capensis	95.43	1.00e-116	412.00
IUUC-Ppe-101677	Prunus persica	28.63	1.00e-26	114.00
IUUC-Pva-102726	Pteropus vampyrus	96.48	0.00e+00	627.00
IUUC-Rno-105576	Rattus norvegicus	95.89	7.00e-180	622.00
IUUC-Sha-106774	Sarcophilus harrisii	91.77	3.00e-158	550.00
IUUC-Sit-109988	Setaria italica	27.78	4.00e-27	115.00
IUUC-Sly-110864	Solanum lycopersicum	29.76	2.00e-28	120.00
IUUC-Sar-113060	Sorex araneus	87.83	3.00e-128	451.00
IUUC-Sbi-114699	Sorghum bicolor	29.12	6.00e-28	118.00
IUUC-Ssc-116445	Sus scrofa	97.36	0.00e+00	632.00
IUUC-Tru-117834	Takifugu rubripes	58.39	2.00e-114	405.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.76	1.00e-113	402.00
IUUC-Tca-121318	Theobroma cacao	27.02	2.00e-27	116.00
IUUC-Tae-124184	Triticum aestivum	29.84	3.00e-29	122.00
IUUC-Tur-126226	Triticum urartu	30.39	3.00e-26	112.00
IUUC-Tbe-128079	Tupaia belangeri	82.02	3.00e-107	380.00
IUUC-Ttr-128391	Tursiops truncatus	92.11	4.00e-169	587.00
IUUC-Vvi-131148	Vitis vinifera	27.02	2.00e-24	106.00
IUUC-Xtr-132743	Xenopus tropicalis	62.02	2.00e-116	411.00
IUUC-Xma-133722	Xiphophorus maculatus	57.76	9.00e-113	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence