iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002699

Ensembl Protein ID

ERN15398

UniProt Accession

U5D4W4; U5D4W4_AMBTC

Genbank Protein ID

ERN15398.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392503

Gene Name

AMTR_s00036p00200680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00036p00200680	ERN15398	ERN15398

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-15	57.3	206	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+d  +c+a   s++ +++Gs Dgt ++WD r+g++++
   Q: 206  GHSDYLHCIAArcSSNQIITGSEDGTGRIWDCRSGKCTR 244
           8********988766**********************86 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MRGGDARNWD EEGYRTSVIE EREALTLTVF RTAFAPSPNP NPNPDIIVAA CSDGSVAPFS 60
ISSFISSYPS SLKSNDHHQH LLDNQVADPL YSLQGHQGPA YDVKFYGDGE NALLLSCGDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGAGGAG GGGATGCAAG GAACTGGGAC GAAGAAGGCT ACAGGACGAG TGTCATTGAA 60
GAGAGGGAGG CCCTAACCCT AACTGTATTC CGTACCGCTT TTGCCCCCTC CCCTAACCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0000347--C:THO complex
GO:0009788--P:negative regulation of abscisic acid-activated signaling pathway
GO:0010267--P:production of ta-siRNAs involved in RNA interference
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	50.56	4.00e-91	327.00
IUUC-Aml-001693	Ailuropoda melanoleuca	29.72	5.00e-24	103.00
IUUC-Aca-004231	Anolis carolinensis	28.89	1.00e-27	116.00
IUUC-Aly-006385	Arabidopsis lyrata	52.30	7.00e-96	342.00
IUUC-Ath-006723	Arabidopsis thaliana	52.01	5.00e-96	343.00
IUUC-Ame-010813	Astyanax mexicanus	28.26	2.00e-18	84.70
IUUC-Bta-013458	Bos taurus	29.32	1.00e-23	102.00
IUUC-Bdi-014935	Brachypodium distachyon	51.56	2.00e-94	337.00
IUUC-Bol-015442	Brassica oleracea	52.72	3.00e-96	343.00
IUUC-Bra-017807	Brassica rapa	51.98	3.00e-96	343.00
IUUC-Cja-019061	Callithrix jacchus	29.32	2.00e-23	101.00
IUUC-Cfa-021146	Canis familiaris	30.12	8.00e-25	106.00
IUUC-Cpo-022512	Cavia porcellus	29.72	6.00e-24	103.00
IUUC-Csa-023055	Chlorocebus sabaeus	29.20	7.00e-24	103.00
IUUC-Cho-024693	Choloepus hoffmanni	33.33	1.00e-19	88.20
IUUC-Cin-025181	Ciona intestinalis	31.18	1.00e-28	119.00
IUUC-Csv-025852	Ciona savignyi	28.57	1.00e-22	99.40
IUUC-Dre-028221	Danio rerio	29.48	1.00e-22	99.40
IUUC-Dno-029200	Dasypus novemcinctus	32.67	6.00e-18	82.40
IUUC-Dor-030863	Dipodomys ordii	29.72	5.00e-24	103.00
IUUC-Dme-032016	Drosophila melanogaster	33.33	2.00e-15	75.50
IUUC-Eca-034363	Equus caballus	29.72	4.00e-24	103.00
IUUC-Fca-036546	Felis catus	30.12	3.00e-24	104.00
IUUC-Gmo-038513	Gadus morhua	27.75	2.00e-20	91.70
IUUC-Gac-042606	Gasterosteus aculeatus	30.74	2.00e-25	108.00
IUUC-Gma-043171	Glycine max	55.08	7.00e-103	365.00
IUUC-Ggo-044877	Gorilla gorilla	29.32	1.00e-23	102.00
IUUC-Hsa-045813	Homo sapiens	29.32	1.00e-23	102.00
IUUC-Hvu-047782	Hordeum vulgare	55.03	8.00e-50	188.00
IUUC-Itr-047876	Ictidomys tridecemlineatus	29.32	2.00e-23	101.00
IUUC-Lch-049506	Latimeria chalumnae	27.54	3.00e-25	107.00
IUUC-Lpe-051203	Leersia perrieri	52.26	1.00e-86	311.00
IUUC-Loc-052451	Lepisosteus oculatus	31.61	1.00e-21	95.50
IUUC-Laf-053864	Loxodonta africana	30.12	8.00e-25	106.00
IUUC-Mcc-055705	Macaca mulatta	30.00	3.00e-23	101.00
IUUC-Meu-055926	Macropus eugenii	29.72	9.00e-24	102.00
IUUC-Mtr-058556	Medicago truncatula	56.34	4.00e-104	370.00
IUUC-Mmr-060836	Microcebus murinus	29.32	2.00e-23	101.00
IUUC-Mdo-062534	Monodelphis domestica	29.34	1.00e-21	96.30
IUUC-Mmu-063560	Mus musculus	29.32	2.00e-22	98.60
IUUC-Mac-065134	Musa acuminata	55.77	4.00e-105	373.00
IUUC-Mpu-066031	Mustela putorius furo	29.72	4.00e-24	103.00
IUUC-Mlu-068051	Myotis lucifugus	30.80	2.00e-23	101.00
IUUC-Nle-069080	Nomascus leucogenys	29.32	1.00e-23	102.00
IUUC-Opr-070787	Ochotona princeps	29.32	1.00e-23	102.00
IUUC-Ont-071952	Oreochromis niloticus	29.80	5.00e-23	100.00
IUUC-Oan-073334	Ornithorhynchus anatinus	30.89	5.00e-19	87.00
IUUC-Oba-075175	Oryza barthii	49.72	6.00e-87	313.00
IUUC-Obr-076393	Oryza brachyantha	51.41	2.00e-87	314.00
IUUC-Ogl-077603	Oryza glaberrima	47.10	2.00e-62	230.00
IUUC-Ogu-078211	Oryza glumaepatula	50.00	1.00e-86	311.00
IUUC-Oin-079554	Oryza indica	57.88	1.00e-84	305.00
IUUC-Olo-080922	Oryza longistaminata	51.39	4.00e-64	237.00
IUUC-Ome-081127	Oryza meridionalis	48.90	6.00e-65	240.00
IUUC-Oni-082376	Oryza nivara	50.00	1.00e-86	311.00
IUUC-Opu-083163	Oryza punctata	50.28	7.00e-88	316.00
IUUC-Oru-084311	Oryza rufipogon	49.72	5.00e-86	310.00
IUUC-Osa-085762	Oryza sativa	47.10	4.00e-61	226.00
IUUC-Oga-088804	Otolemur garnettii	29.32	5.00e-23	100.00
IUUC-Oar-090095	Ovis aries	28.92	7.00e-23	100.00
IUUC-Ptr-090731	Pan troglodytes	29.32	1.00e-23	102.00
IUUC-Pan-092595	Papio anubis	29.32	9.00e-24	102.00
IUUC-Psi-093866	Pelodiscus sinensis	28.89	7.00e-28	116.00
IUUC-Pma-094236	Petromyzon marinus	24.37	6.00e-23	100.00
IUUC-Pfo-096095	Poecilia formosa	29.21	7.00e-24	103.00
IUUC-Pab-098385	Pongo abelii	29.32	1.00e-23	102.00
IUUC-Pop-099433	Populus trichocarpa	58.59	4.00e-101	360.00
IUUC-Pca-101119	Procavia capensis	30.81	3.00e-19	88.20
IUUC-Ppe-101677	Prunus persica	59.77	7.00e-106	375.00
IUUC-Pva-102726	Pteropus vampyrus	29.72	6.00e-25	107.00
IUUC-Rno-105576	Rattus norvegicus	28.92	1.00e-22	99.40
IUUC-Sha-106774	Sarcophilus harrisii	29.32	5.00e-23	100.00
IUUC-Sit-109988	Setaria italica	51.29	4.00e-95	340.00
IUUC-Sly-110864	Solanum lycopersicum	58.06	1.00e-87	315.00
IUUC-Sar-113060	Sorex araneus	28.40	7.00e-20	89.40
IUUC-Sbi-114699	Sorghum bicolor	50.72	3.00e-94	337.00
IUUC-Ssc-116445	Sus scrofa	29.32	6.00e-24	103.00
IUUC-Tru-117834	Takifugu rubripes	28.20	1.00e-22	99.40
IUUC-Tni-119651	Tetraodon nigroviridis	28.84	5.00e-23	100.00
IUUC-Tca-121318	Theobroma cacao	62.57	4.00e-105	373.00
IUUC-Tae-124184	Triticum aestivum	50.56	3.00e-91	327.00
IUUC-Tur-126226	Triticum urartu	59.26	1.00e-72	265.00
IUUC-Ttr-128391	Tursiops truncatus	27.71	1.00e-19	89.40
IUUC-Vvi-131148	Vitis vinifera	62.00	7.00e-108	382.00
IUUC-Xtr-132743	Xenopus tropicalis	26.57	4.00e-21	94.00
IUUC-Xma-133722	Xiphophorus maculatus	29.59	8.00e-25	106.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence