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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-007490
UUCD1 version UUC-ArT-00530
Ensembl Protein ID AT4G24972.1
UniProt Accession Q6TLJ2; TPD1_ARATH
Genbank Protein ID AAR25553.1; AEE84984.1
Protein Name Protein TAPETUM DETERMINANT 1
Genbank Nucleotide ID AY394846; AL049657
Gene Name TPD1; At4g24972
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G24972 AT4G24972.1 AT4G24972.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
Protein-protein Interaction
iRefIndexPINAHINT
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 adaptor/Cullin RING/Other 41.38 2.00e+00 29.60 IUUC-Hsa-046954
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Involved in cell specification during anther and pollen development. Required for the differentiation, specialization and persistence of tapetal cells in the anthers (PubMed:14615601, PubMed:16055681). May serve as an extracellular ligand for the EMS1 receptor kinase to signal cell fate determination during plant sexual reproduction (PubMed:18250314).
Involved in cell specification during anther and pollen development. Required for the differentiation, specialization and persistence of tapetal cells in the anthers (PubMed:14615601, PubMed:16055681). May serve as an extracellular ligand for the EMS1 receptor kinase to signal cell fate determination during plant sexual reproduction (PubMed:18250314).
Protein Sequence
(Fasta)
MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG 60
TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM VEITNQCMSG CIISRIHINC 120
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Protein Fasta Sequence



>IUUC-Ath-007490|E3,Cullin RING/Other|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
AGACGAGAGT CCTCAAATCC ATTTTCTCTC TCTATCTCTC TTTATCCCTT CGTCTTCTTC 60
CTCGGCGACA CCACTTGCAG GCGCTAACTC GACGAAGAAG GAAAAGGTGA GAGAAACTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007490|E3,Cullin RING/Other|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0221--Differentiation
KW-1185--Reference proteome
KW-0732--Signal

Gene Ontology

GO:0048653--P:anther development
GO:0001709--P:cell fate determination

KEGG ath:AT4G24972
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002140 Ailuropoda melanoleuca 41.38 8.30e-02 29.60
IUUC-Atr-003134 Amborella trichopoda 46.36 3.00e-25 106.00
IUUC-Aly-005876 Arabidopsis lyrata 88.52 2.00e-84 304.00
IUUC-Cja-019678 Callithrix jacchus 41.38 7.70e-02 29.60
IUUC-Csa-024174 Chlorocebus sabaeus 41.38 7.70e-02 29.60
IUUC-Cho-024400 Choloepus hoffmanni 37.93 1.60e-01 28.90
IUUC-Dor-031067 Dipodomys ordii 41.38 7.50e-02 29.60
IUUC-Eca-033334 Equus caballus 41.38 7.10e-02 30.00
IUUC-Fca-036077 Felis catus 41.38 7.70e-02 29.60
IUUC-Ggo-045119 Gorilla gorilla 41.38 7.70e-02 29.60
IUUC-Hsa-046954 Homo sapiens 41.38 7.70e-02 29.60
IUUC-Itr-048059 Ictidomys tridecemlineatus 37.93 6.90e-01 26.60
IUUC-Mcc-054639 Macaca mulatta 41.38 7.00e-02 30.00
IUUC-Mtr-058070 Medicago truncatula 36.73 2.00e-05 39.70
IUUC-Mmr-061521 Microcebus murinus 37.93 6.80e-01 26.60
IUUC-Nle-069894 Nomascus leucogenys 41.38 7.70e-02 29.60
IUUC-Opr-070805 Ochotona princeps 41.38 8.20e-02 29.60
IUUC-Ocu-074546 Oryctolagus cuniculus 41.38 7.20e-02 30.00
IUUC-Oar-090377 Ovis aries 37.93 1.00e-01 29.30
IUUC-Ptr-091051 Pan troglodytes 41.38 7.70e-02 29.60
IUUC-Pan-092659 Papio anubis 41.38 7.70e-02 29.60
IUUC-Pab-098169 Pongo abelii 41.38 7.70e-02 29.60
IUUC-Pop-099679 Populus trichocarpa 43.48 6.00e-26 108.00
IUUC-Tca-121130 Theobroma cacao 50.00 5.00e-25 106.00
IUUC-Ttr-128799 Tursiops truncatus 41.38 7.60e-02 29.60
IUUC-Vpa-130466 Vicugna pacos 37.93 1.20e-01 29.30
IUUC-Vvi-131231 Vitis vinifera 57.33 2.00e-24 103.00
Created Date 25-Jun-2017

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