iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aca-004972

UUCD1 version

UUC-AnC-00254

Ensembl Protein ID

ENSACAP00000014914.2

UniProt Accession

H9GM00; H9GM00_ANOCA

Protein Name

Uncharacterized protein

Gene Name

PRPF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000015110.3	ENSACAT00000015217.3	ENSACAP00000014914.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-39	132.4	404	442
UBD/Beta-Prp	7.90e-90	301.0	229	459

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH  ++++++f ++  ++++Gs+D+t+kvWDlr+ +++ 
   Q: 404  GHLKEIYGVNFsPNgYHIATGSGDNTCKVWDLRQRRCIY 442
           7999********77799****************999975 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk........ilvtgseDrtikvwdlstgkcvht 89
           ++ +i+  +fsp+++llat++++g  k+w+v + +l+++l gh+  v a+ f+p++          l++++ D+ +k+w+l++ ++v  
   Q: 229  DDRPISYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKATisldkkdvNLASCAADGSVKLWSLESDEPVAD 317
           67899999**********************************************998888888989*********************** PP
   S: 90   lkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgg 178
           ++gh+ +v  ++++psg +l ++  d   r+wdle ++++   ++gh++ v  +++h dg+l  +G+lD + r+Wdl+tg+++  l+g 
   Q: 318  IEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEIL-HQEGHSKGVYDIAFHVDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG- 404
           *****************************************.********************************************99. PP
   S: 179  htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           h + +y ++f++ng ++++gs d+t k+wdl++ +c++t  +h++ v+ vrf pn
   Q: 405  HLKEIYGVNFSPNGYHIATGSGDNTCKVWDLRQRRCIYTIPAHQNLVTGVRFEPN 459
           ****************************************************987 PP

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MAASRSLTLG KTKASDEGNG PPAKKGPIFY GSLEEKERER LLKGESGMLG KDAVKAAIEA 60
GNINVTSGSG EVFDLEDHIS ERQAEVLAEF ERRKRARQIN VSTDDSEVKA CLRALGEPIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTGTACA ACGACATGTG CAATTATAAA AACAAACATT AACATATACA GATAAAATAG 60
AAAACTTAAT AACATGGTTA AAACACAAAA AGATTAAAAA ATGGACTAAA CAAAATGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0015030--C:Cajal body
GO:0016607--C:nuclear speck
GO:0071001--C:U4/U6 snRNP
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	44.65	3.00e-102	364.00
IUUC-Aml-001737	Ailuropoda melanoleuca	90.93	0.00e+00	932.00
IUUC-Atr-002828	Amborella trichopoda	44.30	6.00e-107	380.00
IUUC-Apl-003723	Anas platyrhynchos	91.41	0.00e+00	967.00
IUUC-Aly-006531	Arabidopsis lyrata	44.04	9.00e-95	340.00
IUUC-Ath-007367	Arabidopsis thaliana	44.79	1.00e-110	393.00
IUUC-Ago-007893	Ashbya gossypii	33.62	1.00e-58	219.00
IUUC-Acl-008236	Aspergillus clavatus	38.97	2.00e-89	322.00
IUUC-Afl-008522	Aspergillus flavus	40.21	3.00e-98	352.00
IUUC-Afu-008904	Aspergillus fumigatus	39.12	5.00e-94	338.00
IUUC-Ani-009198	Aspergillus nidulans	39.79	1.00e-96	347.00
IUUC-Ang-009662	Aspergillus niger	42.86	4.00e-99	355.00
IUUC-Aor-009881	Aspergillus oryzae	40.21	2.00e-98	352.00
IUUC-Ate-010333	Aspergillus terreus	38.56	2.00e-87	315.00
IUUC-Ame-011697	Astyanax mexicanus	79.92	0.00e+00	814.00
IUUC-Bgr-012254	Blumeria graminis	39.61	7.00e-101	360.00
IUUC-Bta-012615	Bos taurus	89.67	0.00e+00	915.00
IUUC-Bci-013720	Botrytis cinerea	39.70	1.00e-99	356.00
IUUC-Bdi-014302	Brachypodium distachyon	45.21	5.00e-108	384.00
IUUC-Bol-015594	Brassica oleracea	44.57	2.00e-99	356.00
IUUC-Bra-017465	Brassica rapa	44.35	1.00e-99	356.00
IUUC-Cel-018632	Caenorhabditis elegans	46.59	1.00e-110	393.00
IUUC-Cja-019747	Callithrix jacchus	89.69	0.00e+00	944.00
IUUC-Cfa-020288	Canis familiaris	90.93	0.00e+00	932.00
IUUC-Cpo-021440	Cavia porcellus	89.35	0.00e+00	923.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	46.78	7.00e-85	306.00
IUUC-Csa-023139	Chlorocebus sabaeus	93.69	0.00e+00	666.00
IUUC-Cho-024481	Choloepus hoffmanni	90.93	0.00e+00	827.00
IUUC-Cin-025106	Ciona intestinalis	58.50	3.00e-176	611.00
IUUC-Csv-026087	Ciona savignyi	58.87	2.00e-176	611.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	37.74	5.00e-92	332.00
IUUC-Cne-026793	Cryptococcus neoformans	39.17	2.00e-104	372.00
IUUC-Dre-028723	Danio rerio	78.54	0.00e+00	796.00
IUUC-Dno-029299	Dasypus novemcinctus	90.73	0.00e+00	931.00
IUUC-Dor-030345	Dipodomys ordii	62.13	4.00e-76	278.00
IUUC-Dse-031562	Dothistroma septosporum	37.02	8.00e-91	327.00
IUUC-Dme-031783	Drosophila melanogaster	56.86	2.00e-138	486.00
IUUC-Ete-032669	Echinops telfairi	88.57	0.00e+00	933.00
IUUC-Eca-033566	Equus caballus	90.93	0.00e+00	931.00
IUUC-Eeu-034524	Erinaceus europaeus	94.14	2.00e-141	495.00
IUUC-Fca-036215	Felis catus	90.93	0.00e+00	933.00
IUUC-Fal-037018	Ficedula albicollis	91.18	0.00e+00	807.00
IUUC-Fox-037936	Fusarium oxysporum	36.79	4.00e-85	308.00
IUUC-Fso-038366	Fusarium solani	38.43	4.00e-90	325.00
IUUC-Gmo-038966	Gadus morhua	67.51	3.00e-141	494.00
IUUC-Ggr-039942	Gaeumannomyces graminis	36.15	2.00e-83	303.00
IUUC-Gga-040797	Gallus gallus	91.90	0.00e+00	962.00
IUUC-Gac-042598	Gasterosteus aculeatus	68.42	0.00e+00	668.00
IUUC-Gma-044220	Glycine max	44.64	1.00e-102	367.00
IUUC-Ggo-044682	Gorilla gorilla	91.12	0.00e+00	931.00
IUUC-Hsa-045804	Homo sapiens	89.89	0.00e+00	944.00
IUUC-Hvu-047567	Hordeum vulgare	44.65	2.00e-98	352.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	90.06	0.00e+00	944.00
IUUC-Kpa-049369	Komagataella pastoris	33.33	6.00e-61	228.00
IUUC-Lch-050074	Latimeria chalumnae	79.11	0.00e+00	813.00
IUUC-Lpe-051333	Leersia perrieri	43.59	2.00e-99	355.00
IUUC-Loc-052164	Lepisosteus oculatus	80.12	0.00e+00	832.00
IUUC-Lma-053088	Leptosphaeria maculans	37.02	3.00e-84	305.00
IUUC-Laf-053460	Loxodonta africana	89.50	0.00e+00	941.00
IUUC-Mcc-055859	Macaca mulatta	90.93	0.00e+00	933.00
IUUC-Meu-056134	Macropus eugenii	89.82	0.00e+00	932.00
IUUC-Mor-057251	Magnaporthe oryzae	37.23	3.00e-86	312.00
IUUC-Mpo-057375	Magnaporthe poae	40.00	2.00e-53	201.00
IUUC-Mtr-057656	Medicago truncatula	43.61	3.00e-94	338.00
IUUC-Mla-059145	Melampsora laricipopulina	41.54	1.00e-101	363.00
IUUC-Mga-059855	Meleagris gallopavo	91.21	0.00e+00	962.00
IUUC-Mvi-060372	Microbotryum violaceum	43.26	3.00e-94	338.00
IUUC-Mmr-060826	Microcebus murinus	90.93	0.00e+00	930.00
IUUC-Mdo-062748	Monodelphis domestica	91.83	0.00e+00	931.00
IUUC-Mmu-063351	Mus musculus	90.53	0.00e+00	929.00
IUUC-Mac-064846	Musa acuminata	44.93	4.00e-97	348.00
IUUC-Mpu-066006	Mustela putorius furo	90.93	0.00e+00	933.00
IUUC-Mlu-067398	Myotis lucifugus	91.32	0.00e+00	932.00
IUUC-Nfi-068399	Neosartorya fischeri	39.12	3.00e-99	355.00
IUUC-Ncr-068711	Neurospora crassa	38.14	6.00e-92	331.00
IUUC-Nle-069982	Nomascus leucogenys	89.69	0.00e+00	944.00
IUUC-Opr-070596	Ochotona princeps	89.50	0.00e+00	943.00
IUUC-Ont-072374	Oreochromis niloticus	74.95	0.00e+00	766.00
IUUC-Oan-073166	Ornithorhynchus anatinus	91.82	0.00e+00	738.00
IUUC-Ocu-074371	Oryctolagus cuniculus	91.12	0.00e+00	934.00
IUUC-Oba-075083	Oryza barthii	43.21	1.00e-102	366.00
IUUC-Obr-076405	Oryza brachyantha	44.29	6.00e-99	353.00
IUUC-Ogl-077683	Oryza glaberrima	43.21	2.00e-102	366.00
IUUC-Ogu-078486	Oryza glumaepatula	43.44	3.00e-102	365.00
IUUC-Oin-079679	Oryza indica	44.06	3.00e-104	372.00
IUUC-Olo-080243	Oryza longistaminata	42.64	7.00e-91	327.00
IUUC-Ome-081230	Oryza meridionalis	43.86	4.00e-104	371.00
IUUC-Oni-082961	Oryza nivara	43.86	3.00e-104	372.00
IUUC-Opu-083189	Oryza punctata	42.58	3.00e-102	365.00
IUUC-Oru-084353	Oryza rufipogon	44.16	5.00e-102	364.00
IUUC-Osa-085458	Oryza sativa	43.86	4.00e-104	371.00
IUUC-Ola-086940	Oryzias latipes	74.46	0.00e+00	769.00
IUUC-Olu-087580	Ostreococcus lucimarinus	37.39	1.00e-66	246.00
IUUC-Oga-088703	Otolemur garnettii	86.62	0.00e+00	896.00
IUUC-Oar-089829	Ovis aries	89.87	0.00e+00	917.00
IUUC-Ptr-090838	Pan troglodytes	89.89	0.00e+00	944.00
IUUC-Pan-092261	Papio anubis	89.14	0.00e+00	936.00
IUUC-Psi-093020	Pelodiscus sinensis	89.87	0.00e+00	956.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.50	9.00e-80	290.00
IUUC-Ppa-095531	Physcomitrella patens	46.80	2.00e-116	412.00
IUUC-Pfo-096812	Poecilia formosa	68.73	0.00e+00	684.00
IUUC-Pab-097805	Pongo abelii	81.05	0.00e+00	809.00
IUUC-Pop-100051	Populus trichocarpa	46.02	2.00e-104	372.00
IUUC-Pca-100152	Procavia capensis	90.61	0.00e+00	937.00
IUUC-Ppe-101244	Prunus persica	46.68	1.00e-105	376.00
IUUC-Pva-102529	Pteropus vampyrus	86.26	0.00e+00	893.00
IUUC-Pgr-103550	Puccinia graminis	36.49	1.00e-100	360.00
IUUC-Ptt-103951	Puccinia triticina	34.18	3.00e-83	302.00
IUUC-Pte-104151	Pyrenophora teres	37.80	5.00e-80	291.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	38.23	7.00e-81	294.00
IUUC-Rno-105747	Rattus norvegicus	90.34	0.00e+00	927.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.15	2.00e-69	256.00
IUUC-Sha-107334	Sarcophilus harrisii	91.63	0.00e+00	932.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	36.20	3.00e-71	262.00
IUUC-Spo-108189	Schizosaccharomyces pombe	37.67	9.00e-83	300.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	39.06	2.00e-97	349.00
IUUC-Smo-109578	Selaginella moellendorffii	46.92	3.00e-113	402.00
IUUC-Sit-110102	Setaria italica	43.69	3.00e-104	371.00
IUUC-Sly-111668	Solanum lycopersicum	47.18	5.00e-107	381.00
IUUC-Stu-111928	Solanum tuberosum	46.95	8.00e-107	380.00
IUUC-Sar-113266	Sorex araneus	79.68	0.00e+00	763.00
IUUC-Sbi-114134	Sorghum bicolor	43.69	5.00e-104	371.00
IUUC-Sre-115114	Sporisorium reilianum	42.14	2.00e-106	379.00
IUUC-Ssc-115443	Sus scrofa	90.93	0.00e+00	931.00
IUUC-Tgu-117157	Taeniopygia guttata	91.55	0.00e+00	910.00
IUUC-Tru-118587	Takifugu rubripes	74.46	0.00e+00	746.00
IUUC-Tsy-119157	Tarsius syrichta	93.33	0.00e+00	744.00
IUUC-Tni-120427	Tetraodon nigroviridis	75.64	0.00e+00	762.00
IUUC-Tca-121368	Theobroma cacao	46.04	1.00e-108	387.00
IUUC-Tre-122074	Trichoderma reesei	38.14	2.00e-89	322.00
IUUC-Tvi-122349	Trichoderma virens	37.08	1.00e-87	316.00
IUUC-Tae-125651	Triticum aestivum	44.34	2.00e-104	372.00
IUUC-Tur-126532	Triticum urartu	43.38	2.00e-90	326.00
IUUC-Tme-126951	Tuber melanosporum	41.54	6.00e-104	371.00
IUUC-Tbe-128136	Tupaia belangeri	81.68	0.00e+00	833.00
IUUC-Ttr-129169	Tursiops truncatus	92.95	2.00e-157	548.00
IUUC-Uma-129399	Ustilago maydis	42.39	4.00e-102	364.00
IUUC-Vda-129842	Verticillium dahliae	38.76	1.00e-94	339.00
IUUC-Vpa-130440	Vicugna pacos	89.89	0.00e+00	943.00
IUUC-Vvi-131075	Vitis vinifera	47.39	6.00e-107	381.00
IUUC-Xtr-132713	Xenopus tropicalis	49.61	3.00e-107	381.00
IUUC-Xma-133002	Xiphophorus maculatus	78.55	2.00e-173	601.00
IUUC-Yli-134569	Yarrowia lipolytica	36.38	5.00e-76	278.00
IUUC-Zma-135799	Zea mays	42.22	7.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence