iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000019853.2	ENSCJAT00000038993.1	ENSCJAP00000036920.1
ENSCJAG00000019853.2	ENSCJAT00000039015.2	ENSCJAP00000036942.2
ENSCJAG00000019853.2	ENSCJAT00000038983.2	ENSCJAP00000036911.2
ENSCJAG00000019853.2	ENSCJAT00000052962.1	ENSCJAP00000046283.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-21	75.6	82	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl.af.........sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt ++t++  f            l++++s D t+ vWD +tg++++
   Q: 82   GHTQKITAIiTFpslesceekR-QLILTASADRTVIVWDSDTGRQVQ 127
           8*******73599999765322.67******************9987 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRFLV ELDDYRFASA 60
GDDGIIFVWN AQTGEKLLEL NGHTQKITAI ITFPSLESCE EKRQLILTAS ADRTVIVWDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAGGCGCA GCGCGCGCCC CGGAATCGCG GGAGCCACCT CCGCCTTAGG CCTCCGCTCC 60
CCAAGCGACT GCCCAAACTA AGCCTCGGTG GCTGGATACG GGAGCGCTCT GGAGACAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

KEGG

cjc:100398190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	90.46	0.00e+00	863.00
IUUC-Apl-004087	Anas platyrhynchos	77.12	0.00e+00	655.00
IUUC-Aca-005359	Anolis carolinensis	71.62	0.00e+00	689.00
IUUC-Ame-010669	Astyanax mexicanus	43.27	1.00e-78	286.00
IUUC-Bta-013534	Bos taurus	87.80	0.00e+00	840.00
IUUC-Cfa-020310	Canis familiaris	90.29	0.00e+00	835.00
IUUC-Cpo-021664	Cavia porcellus	89.74	0.00e+00	856.00
IUUC-Csa-024228	Chlorocebus sabaeus	95.64	0.00e+00	905.00
IUUC-Cho-024898	Choloepus hoffmanni	87.00	1.00e-114	406.00
IUUC-Dre-028538	Danio rerio	55.02	6.00e-132	464.00
IUUC-Dno-028861	Dasypus novemcinctus	88.94	0.00e+00	845.00
IUUC-Dor-030111	Dipodomys ordii	89.11	0.00e+00	854.00
IUUC-Ete-032444	Echinops telfairi	90.03	1.00e-164	572.00
IUUC-Eca-033676	Equus caballus	88.45	0.00e+00	839.00
IUUC-Eeu-034571	Erinaceus europaeus	79.82	0.00e+00	743.00
IUUC-Fca-035387	Felis catus	91.97	0.00e+00	872.00
IUUC-Fal-037310	Ficedula albicollis	75.57	0.00e+00	693.00
IUUC-Gmo-039224	Gadus morhua	54.15	2.00e-132	465.00
IUUC-Gga-040957	Gallus gallus	76.98	0.00e+00	711.00
IUUC-Gac-042385	Gasterosteus aculeatus	54.82	2.00e-141	495.00
IUUC-Ggo-044973	Gorilla gorilla	95.24	0.00e+00	900.00
IUUC-Hsa-046842	Homo sapiens	95.42	0.00e+00	905.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	92.24	6.00e-179	619.00
IUUC-Lch-049625	Latimeria chalumnae	64.47	2.00e-176	612.00
IUUC-Loc-052368	Lepisosteus oculatus	59.43	9.00e-159	553.00
IUUC-Laf-053678	Loxodonta africana	89.50	0.00e+00	844.00
IUUC-Mcc-055184	Macaca mulatta	95.28	0.00e+00	870.00
IUUC-Meu-056165	Macropus eugenii	76.70	0.00e+00	700.00
IUUC-Mga-060184	Meleagris gallopavo	75.32	4.00e-65	239.00
IUUC-Mmr-060965	Microcebus murinus	93.03	0.00e+00	879.00
IUUC-Mdo-062702	Monodelphis domestica	85.62	0.00e+00	832.00
IUUC-Mmu-063649	Mus musculus	81.67	2.00e-118	419.00
IUUC-Mpu-065747	Mustela putorius furo	90.37	0.00e+00	857.00
IUUC-Mlu-067873	Myotis lucifugus	90.65	0.00e+00	854.00
IUUC-Nle-069670	Nomascus leucogenys	95.86	0.00e+00	902.00
IUUC-Opr-070266	Ochotona princeps	80.66	0.00e+00	763.00
IUUC-Ont-071242	Oreochromis niloticus	54.64	5.00e-141	494.00
IUUC-Oan-072879	Ornithorhynchus anatinus	84.84	0.00e+00	779.00
IUUC-Ocu-074872	Oryctolagus cuniculus	67.48	4.00e-164	570.00
IUUC-Ola-087211	Oryzias latipes	49.23	3.00e-117	415.00
IUUC-Oga-088852	Otolemur garnettii	91.07	0.00e+00	872.00
IUUC-Oar-089812	Ovis aries	87.58	0.00e+00	836.00
IUUC-Ptr-091067	Pan troglodytes	96.08	0.00e+00	908.00
IUUC-Pan-091778	Papio anubis	95.43	0.00e+00	900.00
IUUC-Psi-093932	Pelodiscus sinensis	77.40	0.00e+00	716.00
IUUC-Pfo-096845	Poecilia formosa	55.22	8.00e-139	486.00
IUUC-Pab-097892	Pongo abelii	93.73	0.00e+00	792.00
IUUC-Pca-100567	Procavia capensis	67.10	2.00e-172	598.00
IUUC-Pva-102560	Pteropus vampyrus	88.02	0.00e+00	829.00
IUUC-Rno-105662	Rattus norvegicus	85.75	0.00e+00	815.00
IUUC-Sha-107058	Sarcophilus harrisii	83.74	0.00e+00	799.00
IUUC-Sar-113643	Sorex araneus	78.46	0.00e+00	686.00
IUUC-Ssc-115791	Sus scrofa	90.20	0.00e+00	857.00
IUUC-Tgu-117145	Taeniopygia guttata	76.91	0.00e+00	704.00
IUUC-Tru-117875	Takifugu rubripes	55.92	3.00e-144	504.00
IUUC-Tsy-119030	Tarsius syrichta	93.13	0.00e+00	707.00
IUUC-Tni-119761	Tetraodon nigroviridis	54.27	4.00e-138	484.00
IUUC-Tbe-127757	Tupaia belangeri	90.05	0.00e+00	750.00
IUUC-Ttr-128762	Tursiops truncatus	92.37	0.00e+00	877.00
IUUC-Vpa-130360	Vicugna pacos	91.94	0.00e+00	878.00
IUUC-Xtr-131954	Xenopus tropicalis	64.55	2.00e-170	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence