iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-104843

Ensembl Protein ID

ENSRNOP00000034184.3

UniProt Accession

D3ZJT1; D3ZJT1_RAT

Genbank Protein ID

ENSRNOP00000034184

Protein Name

WD repeat domain 76

Genbank Nucleotide ID

AC097745

Gene Name

Wdr76

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000022491.5	ENSRNOT00000036209.3	ENSRNOP00000034184.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-12	47.1	357	391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H+ +v+cl+f  ++  +l+s s+Dgt+++ D++t 
   Q: 357  HSQPVSCLSFspTNpAHLLSLSYDGTVRCGDFSTA 391
           9**********755799***********9887765 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSGFIAVAEE KAGSKQCPQV QVNEYKENEN IAYTSLRPIQ ITTRRKAAKV YLYPFSLSNP 60
KLGLFKLSKS PVENKSSSEM VQKKTDQKKT CRRVLTSKMK ALSSKAESCL LKPALDSHTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGGGT TCATCGCTGT GGCTGAGGAA AAGGCGGGCT CCAAACAGTG TCCCCAGGTG 60
CAGGTGAGAC CTGATTCGGC CTGGGAGGGA TCTGCTAGTC ACTGTCACCT GGCGCCAAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0006974--P:cellular response to DNA damage stimulus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002605	Amborella trichopoda	26.53	6.00e-29	122.00
IUUC-Apl-003441	Anas platyrhynchos	55.72	1.00e-153	535.00
IUUC-Aca-004241	Anolis carolinensis	56.17	3.00e-149	521.00
IUUC-Aly-005444	Arabidopsis lyrata	26.33	8.00e-28	118.00
IUUC-Ath-007550	Arabidopsis thaliana	29.62	6.00e-26	112.00
IUUC-Ago-007715	Ashbya gossypii	24.85	2.00e-19	90.10
IUUC-Acl-008370	Aspergillus clavatus	24.87	1.00e-25	111.00
IUUC-Afl-008586	Aspergillus flavus	25.74	2.00e-28	120.00
IUUC-Afu-008907	Aspergillus fumigatus	25.88	7.00e-28	118.00
IUUC-Ani-009415	Aspergillus nidulans	26.33	2.00e-25	110.00
IUUC-Ang-009597	Aspergillus niger	24.18	9.00e-08	51.60
IUUC-Aor-010197	Aspergillus oryzae	25.74	1.00e-28	120.00
IUUC-Ate-010280	Aspergillus terreus	26.89	2.00e-28	120.00
IUUC-Bgr-012236	Blumeria graminis	25.24	3.00e-27	116.00
IUUC-Bta-013059	Bos taurus	71.75	0.00e+00	856.00
IUUC-Bci-013796	Botrytis cinerea	27.66	2.00e-27	117.00
IUUC-Bdi-015040	Brachypodium distachyon	31.33	6.00e-25	108.00
IUUC-Bol-015202	Brassica oleracea	28.76	1.00e-24	108.00
IUUC-Bra-018032	Brassica rapa	30.04	1.00e-23	104.00
IUUC-Cja-019043	Callithrix jacchus	69.95	0.00e+00	824.00
IUUC-Cfa-021103	Canis familiaris	72.27	0.00e+00	869.00
IUUC-Cpo-021508	Cavia porcellus	70.16	0.00e+00	835.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	25.70	5.00e-17	82.80
IUUC-Csa-023555	Chlorocebus sabaeus	71.94	0.00e+00	720.00
IUUC-Cho-024931	Choloepus hoffmanni	66.67	1.00e-75	277.00
IUUC-Cin-025651	Ciona intestinalis	32.39	4.00e-63	235.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	26.20	4.00e-27	115.00
IUUC-Cne-027093	Cryptococcus neoformans	24.94	3.00e-17	83.60
IUUC-Cme-027238	Cyanidioschyzon merolae	25.93	4.00e-21	96.30
IUUC-Dre-027441	Danio rerio	37.29	6.00e-93	334.00
IUUC-Dno-029575	Dasypus novemcinctus	71.13	0.00e+00	850.00
IUUC-Dor-030554	Dipodomys ordii	68.22	0.00e+00	651.00
IUUC-Dse-031299	Dothistroma septosporum	25.33	1.00e-25	110.00
IUUC-Ete-032716	Echinops telfairi	72.12	1.00e-92	333.00
IUUC-Eca-034027	Equus caballus	70.70	0.00e+00	708.00
IUUC-Eeu-035234	Erinaceus europaeus	77.56	5.00e-72	265.00
IUUC-Fca-035892	Felis catus	72.06	0.00e+00	877.00
IUUC-Fal-036986	Ficedula albicollis	54.91	6.00e-136	477.00
IUUC-Fox-037750	Fusarium oxysporum	25.82	4.00e-25	109.00
IUUC-Fso-038198	Fusarium solani	25.27	4.00e-21	96.30
IUUC-Gga-040479	Gallus gallus	53.21	3.00e-108	385.00
IUUC-Gac-042043	Gasterosteus aculeatus	44.77	2.00e-97	348.00
IUUC-Gma-043913	Glycine max	25.53	1.00e-31	130.00
IUUC-Ggo-045290	Gorilla gorilla	70.19	0.00e+00	824.00
IUUC-Hsa-047021	Homo sapiens	69.87	0.00e+00	816.00
IUUC-Hvu-047193	Hordeum vulgare	29.76	6.00e-23	101.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	73.24	0.00e+00	895.00
IUUC-Kpa-049275	Komagataella pastoris	22.16	4.00e-21	96.30
IUUC-Lch-049718	Latimeria chalumnae	55.13	4.00e-146	511.00
IUUC-Lpe-051708	Leersia perrieri	28.05	5.00e-19	89.00
IUUC-Loc-052565	Lepisosteus oculatus	47.17	4.00e-119	421.00
IUUC-Lma-053276	Leptosphaeria maculans	26.63	2.00e-27	117.00
IUUC-Laf-053970	Loxodonta africana	67.04	0.00e+00	812.00
IUUC-Mcc-054740	Macaca mulatta	72.47	0.00e+00	729.00
IUUC-Meu-056546	Macropus eugenii	61.00	8.00e-74	271.00
IUUC-Mtr-058451	Medicago truncatula	27.10	2.00e-31	130.00
IUUC-Mla-059117	Melampsora laricipopulina	26.29	2.00e-25	110.00
IUUC-Mga-059328	Meleagris gallopavo	51.35	1.00e-114	406.00
IUUC-Mvi-060555	Microbotryum violaceum	28.46	2.00e-25	110.00
IUUC-Mmr-061520	Microcebus murinus	70.68	0.00e+00	884.00
IUUC-Mdo-062812	Monodelphis domestica	56.35	0.00e+00	645.00
IUUC-Mmu-064011	Mus musculus	85.21	0.00e+00	858.00
IUUC-Mpu-066486	Mustela putorius furo	71.27	0.00e+00	858.00
IUUC-Mlu-067721	Myotis lucifugus	68.19	0.00e+00	688.00
IUUC-Nfi-068314	Neosartorya fischeri	25.74	5.00e-27	115.00
IUUC-Ncr-068896	Neurospora crassa	25.34	1.00e-25	111.00
IUUC-Nle-069369	Nomascus leucogenys	70.03	0.00e+00	843.00
IUUC-Opr-070975	Ochotona princeps	68.32	0.00e+00	775.00
IUUC-Ont-072528	Oreochromis niloticus	44.47	4.00e-102	365.00
IUUC-Oan-072955	Ornithorhynchus anatinus	58.67	7.00e-140	490.00
IUUC-Ocu-074561	Oryctolagus cuniculus	72.89	0.00e+00	843.00
IUUC-Oba-074982	Oryza barthii	31.06	5.00e-24	106.00
IUUC-Ogl-077685	Oryza glaberrima	30.15	3.00e-25	109.00
IUUC-Ogu-078331	Oryza glumaepatula	30.15	3.00e-25	109.00
IUUC-Oin-079507	Oryza indica	30.15	1.00e-24	108.00
IUUC-Olo-080604	Oryza longistaminata	29.51	2.00e-19	90.10
IUUC-Ome-081816	Oryza meridionalis	30.11	8.00e-24	104.00
IUUC-Oni-082051	Oryza nivara	30.15	5.00e-25	108.00
IUUC-Opu-083372	Oryza punctata	30.69	4.00e-25	109.00
IUUC-Oru-084578	Oryza rufipogon	30.15	3.00e-25	109.00
IUUC-Osa-086177	Oryza sativa	30.15	3.00e-25	109.00
IUUC-Ola-087208	Oryzias latipes	43.16	8.00e-96	343.00
IUUC-Olu-087680	Ostreococcus lucimarinus	29.91	5.00e-33	135.00
IUUC-Oga-088104	Otolemur garnettii	70.85	0.00e+00	855.00
IUUC-Oar-090157	Ovis aries	71.63	0.00e+00	867.00
IUUC-Ptr-091615	Pan troglodytes	69.39	0.00e+00	811.00
IUUC-Pan-092212	Papio anubis	69.71	0.00e+00	779.00
IUUC-Psi-092950	Pelodiscus sinensis	61.41	9.00e-167	580.00
IUUC-Pma-094625	Petromyzon marinus	34.35	5.00e-31	127.00
IUUC-Pno-094824	Phaeosphaeria nodorum	28.23	3.00e-31	129.00
IUUC-Pfo-096922	Poecilia formosa	42.41	1.00e-103	370.00
IUUC-Pab-097591	Pongo abelii	70.51	0.00e+00	833.00
IUUC-Pop-099337	Populus trichocarpa	25.29	4.00e-33	135.00
IUUC-Pca-101025	Procavia capensis	56.72	0.00e+00	630.00
IUUC-Ppe-101256	Prunus persica	26.83	2.00e-19	90.10
IUUC-Pva-102453	Pteropus vampyrus	66.24	0.00e+00	772.00
IUUC-Pgr-103436	Puccinia graminis	22.32	3.00e-17	83.20
IUUC-Ptt-103899	Puccinia triticina	29.07	4.00e-21	96.30
IUUC-Pte-104258	Pyrenophora teres	27.47	2.00e-29	123.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	27.01	3.00e-29	122.00
IUUC-Sce-106189	Saccharomyces cerevisiae	23.00	6.00e-20	92.00
IUUC-Sha-106672	Sarcophilus harrisii	59.67	0.00e+00	650.00
IUUC-Sit-109704	Setaria italica	26.84	2.00e-24	107.00
IUUC-Sly-111853	Solanum lycopersicum	23.84	1.00e-24	107.00
IUUC-Stu-112482	Solanum tuberosum	23.64	2.00e-21	97.10
IUUC-Sar-113537	Sorex araneus	53.15	5.00e-89	322.00
IUUC-Sbi-114517	Sorghum bicolor	28.72	8.00e-19	88.60
IUUC-Sre-114960	Sporisorium reilianum	27.27	2.00e-12	67.80
IUUC-Ssc-115568	Sus scrofa	71.20	0.00e+00	866.00
IUUC-Tgu-117276	Taeniopygia guttata	51.80	6.00e-128	450.00
IUUC-Tru-117559	Takifugu rubripes	53.60	1.00e-36	144.00
IUUC-Tsy-119234	Tarsius syrichta	54.37	2.00e-165	576.00
IUUC-Tni-120358	Tetraodon nigroviridis	42.05	1.00e-94	340.00
IUUC-Tca-121273	Theobroma cacao	27.13	6.00e-25	108.00
IUUC-Tre-121932	Trichoderma reesei	27.42	4.00e-28	119.00
IUUC-Tvi-122567	Trichoderma virens	28.53	5.00e-31	129.00
IUUC-Tae-123506	Triticum aestivum	30.43	3.00e-20	93.20
IUUC-Tme-126958	Tuber melanosporum	26.39	5.00e-17	82.00
IUUC-Tbe-127425	Tupaia belangeri	74.82	0.00e+00	679.00
IUUC-Ttr-129123	Tursiops truncatus	62.92	0.00e+00	721.00
IUUC-Uma-129495	Ustilago maydis	31.02	8.00e-14	72.40
IUUC-Vda-129981	Verticillium dahliae	26.45	6.00e-28	119.00
IUUC-Vpa-130437	Vicugna pacos	66.35	0.00e+00	764.00
IUUC-Vvi-131430	Vitis vinifera	25.68	3.00e-23	102.00
IUUC-Xtr-132670	Xenopus tropicalis	55.67	3.00e-136	478.00
IUUC-Xma-133375	Xiphophorus maculatus	43.71	3.00e-105	375.00
IUUC-Yli-134341	Yarrowia lipolytica	25.13	2.00e-25	110.00
IUUC-Zma-135413	Zea mays	28.08	2.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence