iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067769

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02002533

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000009240.2	ENSMLUT00000009243.2	ENSMLUP00000008424.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-07	31.0	464	502
E3 activity/RING/U-box	5.10e-11	42.5	462	530

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+  f + p+++pCgH+f+++Cl++          +++CPlC+
   Q: 464  CALCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNAKCPLCK 502
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl....teedlvPnltlrrliqawcee 71
           + C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP+++  l    ++++   n+ + +li +++ e
   Q: 462  LECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAK-CPLCKDGLsqclASRKYSKNIIMEELIAKFLPE 530
           78*********************************9.****86663333788889999999999998765 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MDSFQAEQMP SLPAELASNN LELAEPAASV TRVDSGHPEA TTEGLAPLPT REPEQPPPAS 60
TTECKVLLTQ ADALASGGRL REALEVYRQL SERQQLVAEQ LQQLVRCLAE NIPPGEAPAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTCAT TTCAGGCTGA ACAGATGCCG AGCTTGCCCG CTGAGCTCGC GAGCAACAAC 60
TTAGAGCTGG CGGAGCCGGC GGCATCAGTG ACCCGTGTAG ATTCGGGCCA TCCGGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000755	Aegilops tauschii	30.53	3.00e-11	63.20
IUUC-Aml-001774	Ailuropoda melanoleuca	74.87	0.00e+00	977.00
IUUC-Apl-003916	Anas platyrhynchos	58.38	7.00e-179	619.00
IUUC-Aca-004822	Anolis carolinensis	47.55	3.00e-168	585.00
IUUC-Ame-010750	Astyanax mexicanus	44.14	3.00e-164	572.00
IUUC-Bta-012872	Bos taurus	81.97	0.00e+00	1102.00
IUUC-Cel-018356	Caenorhabditis elegans	31.33	2.00e-10	58.20
IUUC-Cja-018747	Callithrix jacchus	76.54	0.00e+00	982.00
IUUC-Cfa-020101	Canis familiaris	81.88	0.00e+00	1076.00
IUUC-Cpo-022041	Cavia porcellus	72.56	0.00e+00	952.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	32.80	2.00e-09	55.80
IUUC-Csa-024034	Chlorocebus sabaeus	84.08	0.00e+00	1140.00
IUUC-Cin-025668	Ciona intestinalis	44.70	2.00e-78	287.00
IUUC-Csv-026364	Ciona savignyi	44.22	3.00e-78	285.00
IUUC-Dre-028400	Danio rerio	49.49	3.00e-141	495.00
IUUC-Dno-029518	Dasypus novemcinctus	72.37	0.00e+00	945.00
IUUC-Dor-031132	Dipodomys ordii	69.99	0.00e+00	954.00
IUUC-Dse-031331	Dothistroma septosporum	33.23	2.00e-40	160.00
IUUC-Eca-033382	Equus caballus	86.56	0.00e+00	1187.00
IUUC-Fca-035777	Felis catus	70.97	0.00e+00	664.00
IUUC-Fal-036730	Ficedula albicollis	60.11	0.00e+00	643.00
IUUC-Fso-038334	Fusarium solani	43.00	1.00e-39	157.00
IUUC-Gmo-039110	Gadus morhua	48.73	1.00e-177	616.00
IUUC-Gga-041187	Gallus gallus	56.05	0.00e+00	807.00
IUUC-Gac-042201	Gasterosteus aculeatus	50.57	0.00e+00	646.00
IUUC-Ggo-045111	Gorilla gorilla	84.08	0.00e+00	1131.00
IUUC-Hsa-045695	Homo sapiens	83.95	0.00e+00	1127.00
IUUC-Itr-048224	Ictidomys tridecemlineatus	46.23	1.00e-127	449.00
IUUC-Lch-050429	Latimeria chalumnae	51.99	0.00e+00	732.00
IUUC-Loc-051823	Lepisosteus oculatus	74.92	2.00e-137	483.00
IUUC-Lma-053145	Leptosphaeria maculans	31.34	3.00e-42	166.00
IUUC-Laf-053434	Loxodonta africana	82.00	0.00e+00	838.00
IUUC-Mcc-055249	Macaca mulatta	77.14	0.00e+00	730.00
IUUC-Meu-055901	Macropus eugenii	48.00	7.00e-99	354.00
IUUC-Mga-060131	Meleagris gallopavo	60.89	2.00e-175	608.00
IUUC-Mmr-060749	Microcebus murinus	84.01	0.00e+00	1148.00
IUUC-Mdo-062261	Monodelphis domestica	55.23	0.00e+00	734.00
IUUC-Mmu-063219	Mus musculus	76.60	0.00e+00	1027.00
IUUC-Mpu-066222	Mustela putorius furo	74.05	0.00e+00	979.00
IUUC-Nle-069738	Nomascus leucogenys	86.91	0.00e+00	931.00
IUUC-Ont-072029	Oreochromis niloticus	55.39	2.00e-171	595.00
IUUC-Oan-073179	Ornithorhynchus anatinus	76.11	2.00e-161	561.00
IUUC-Ocu-074884	Oryctolagus cuniculus	78.80	0.00e+00	1017.00
IUUC-Ogl-077658	Oryza glaberrima	31.90	2.00e-11	63.20
IUUC-Ome-081482	Oryza meridionalis	31.90	3.00e-11	62.80
IUUC-Osa-085978	Oryza sativa	31.90	2.00e-11	63.50
IUUC-Ola-086534	Oryzias latipes	58.50	5.00e-134	471.00
IUUC-Oga-089109	Otolemur garnettii	80.93	0.00e+00	1079.00
IUUC-Oar-089903	Ovis aries	81.71	0.00e+00	1124.00
IUUC-Ptr-091238	Pan troglodytes	83.38	0.00e+00	1114.00
IUUC-Pan-092379	Papio anubis	78.69	0.00e+00	1124.00
IUUC-Psi-093418	Pelodiscus sinensis	57.95	0.00e+00	704.00
IUUC-Pma-094231	Petromyzon marinus	63.60	2.00e-110	391.00
IUUC-Pno-094889	Phaeosphaeria nodorum	39.62	4.00e-42	165.00
IUUC-Pfo-097284	Poecilia formosa	46.71	0.00e+00	627.00
IUUC-Pab-098343	Pongo abelii	77.96	0.00e+00	1095.00
IUUC-Pca-100905	Procavia capensis	76.90	0.00e+00	912.00
IUUC-Pva-102242	Pteropus vampyrus	80.42	0.00e+00	1056.00
IUUC-Ptt-103898	Puccinia triticina	27.67	9.00e-30	124.00
IUUC-Pte-104214	Pyrenophora teres	31.34	8.00e-41	161.00
IUUC-Pyt-104565	Pyrenophora triticirepentis	31.64	1.00e-40	161.00
IUUC-Rno-105899	Rattus norvegicus	70.78	0.00e+00	982.00
IUUC-Sha-107565	Sarcophilus harrisii	51.95	0.00e+00	672.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	35.78	8.00e-30	124.00
IUUC-Spo-108344	Schizosaccharomyces pombe	34.36	2.00e-24	107.00
IUUC-Sar-112999	Sorex araneus	62.16	0.00e+00	639.00
IUUC-Sre-114977	Sporisorium reilianum	34.51	2.00e-37	151.00
IUUC-Ssc-115705	Sus scrofa	86.20	0.00e+00	1154.00
IUUC-Tgu-116978	Taeniopygia guttata	62.50	0.00e+00	775.00
IUUC-Tru-118016	Takifugu rubripes	43.35	2.00e-156	546.00
IUUC-Tsy-118988	Tarsius syrichta	86.80	0.00e+00	872.00
IUUC-Tni-119913	Tetraodon nigroviridis	45.04	2.00e-159	555.00
IUUC-Tbe-127563	Tupaia belangeri	67.98	7.00e-135	473.00
IUUC-Ttr-128875	Tursiops truncatus	83.79	0.00e+00	1069.00
IUUC-Uma-129541	Ustilago maydis	34.77	1.00e-35	145.00
IUUC-Vpa-130779	Vicugna pacos	93.38	7.00e-158	550.00
IUUC-Xtr-132508	Xenopus tropicalis	50.43	0.00e+00	703.00
IUUC-Xma-133971	Xiphophorus maculatus	48.73	3.00e-178	618.00
IUUC-Yli-134610	Yarrowia lipolytica	24.55	2.00e-07	50.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence