iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113871

Ensembl Protein ID

Sb02g024340.1

UniProt Accession

A0A1B6QCE9; A0A1B6QCE9_SORBI

Genbank Protein ID

KXG35597.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G197100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g024340	Sb02g024340.1	Sb02g024340.1
Sb02g024340	Sb02g024340.2	Sb02g024340.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.50e-20	73.5	163	204
ULD/UDP/UBQ/UBQ_PIM	3.90e-21	75.6	1	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e  ++ + eMG   +dr+++l+aLraa+nn+e+AveyL++g
   Q: 163  LEGTIQSILEMGggtWDRDTVLRALRAAYNNPERAVEYLYSG 204
           57789**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           mk+ vktlkg+ f++ev++ d+v+++K+ i++ +    +p++qq LI++Gk+LkDdttL+e+++ +++++++++++
   Q: 1    MKVSVKTLKGSSFQIEVEPTDKVADVKKVIESIQEnasYPADQQVLIHQGKVLKDDTTLEENQVVENNFLVIMLRQ 76
           99**************************9999888889***********************************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKVSVKTLKG SSFQIEVEPT DKVADVKKVI ESIQENASYP ADQQVLIHQG KVLKDDTTLE 60
ENQVVENNFL VIMLRQYNCN LSQNKGSSSA APAKATANQA PPTQTVPATP TQMSAAPAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCCTACGA TTTGGATGAC TTCGTGAAAC AGAAAGATAA CATATAAATT CAGCAAACAA 60
GAGGACCCAA CCCGCAAAAG GCGCCCTTCC GCCGCTACCG CTAGGGACCG GAATAGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	82.23	2.00e-97	348.00
IUUC-Ame-011107	Astyanax mexicanus	43.30	1.00e-14	73.20
IUUC-Bta-012922	Bos taurus	36.55	7.00e-28	117.00
IUUC-Bci-013933	Botrytis cinerea	37.45	7.00e-24	103.00
IUUC-Bdi-014253	Brachypodium distachyon	72.43	7.00e-134	469.00
IUUC-Bol-015641	Brassica oleracea	65.73	2.00e-83	301.00
IUUC-Cel-018364	Caenorhabditis elegans	28.38	1.00e-11	63.20
IUUC-Cja-018946	Callithrix jacchus	33.17	6.00e-34	137.00
IUUC-Cho-024814	Choloepus hoffmanni	38.60	1.00e-17	82.80
IUUC-Dno-029543	Dasypus novemcinctus	37.35	4.00e-29	121.00
IUUC-Dor-030358	Dipodomys ordii	37.70	8.00e-31	126.00
IUUC-Dse-031336	Dothistroma septosporum	45.60	3.00e-19	88.60
IUUC-Eeu-034721	Erinaceus europaeus	32.89	2.00e-17	82.40
IUUC-Gmo-039080	Gadus morhua	34.87	1.00e-25	109.00
IUUC-Ggr-040116	Gaeumannomyces graminis	49.59	5.00e-21	94.40
IUUC-Gac-042298	Gasterosteus aculeatus	31.48	6.00e-35	140.00
IUUC-Hvu-047832	Hordeum vulgare	80.49	2.00e-100	357.00
IUUC-Lpe-051087	Leersia perrieri	83.60	2.00e-105	374.00
IUUC-Loc-051748	Lepisosteus oculatus	36.51	5.00e-30	124.00
IUUC-Mpo-057609	Magnaporthe poae	47.62	4.00e-20	90.90
IUUC-Mtr-058148	Medicago truncatula	59.95	2.00e-115	407.00
IUUC-Mmu-063258	Mus musculus	35.88	7.00e-29	120.00
IUUC-Mlu-067999	Myotis lucifugus	34.52	3.00e-27	115.00
IUUC-Oba-075392	Oryza barthii	74.32	2.00e-99	355.00
IUUC-Ogl-077021	Oryza glaberrima	76.80	1.00e-98	352.00
IUUC-Ogu-078883	Oryza glumaepatula	74.32	1.00e-99	355.00
IUUC-Oin-079817	Oryza indica	73.93	5.00e-99	353.00
IUUC-Olo-080929	Oryza longistaminata	73.93	5.00e-99	353.00
IUUC-Ome-081866	Oryza meridionalis	74.32	1.00e-99	355.00
IUUC-Oni-083092	Oryza nivara	73.93	5.00e-99	353.00
IUUC-Opu-083756	Oryza punctata	80.24	6.00e-102	363.00
IUUC-Oru-084816	Oryza rufipogon	73.93	5.00e-99	353.00
IUUC-Osa-086112	Oryza sativa	73.93	5.00e-99	353.00
IUUC-Olu-087843	Ostreococcus lucimarinus	40.98	1.00e-38	152.00
IUUC-Psi-093477	Pelodiscus sinensis	39.81	1.00e-13	70.10
IUUC-Pno-095064	Phaeosphaeria nodorum	30.57	9.00e-14	70.50
IUUC-Ppa-095964	Physcomitrella patens	49.62	8.00e-83	299.00
IUUC-Pop-099642	Populus trichocarpa	70.04	1.00e-86	312.00
IUUC-Ppe-101830	Prunus persica	58.63	5.00e-100	356.00
IUUC-Pva-102137	Pteropus vampyrus	36.47	2.00e-28	119.00
IUUC-Pte-104303	Pyrenophora teres	44.62	6.00e-20	90.90
IUUC-Pyt-104580	Pyrenophora triticirepentis	45.38	7.00e-20	90.50
IUUC-Rno-104844	Rattus norvegicus	36.02	4.00e-29	121.00
IUUC-Sce-106214	Saccharomyces cerevisiae	33.33	1.00e-12	66.20
IUUC-Sit-110694	Setaria italica	91.80	6.00e-81	294.00
IUUC-Tru-117920	Takifugu rubripes	39.74	2.00e-39	155.00
IUUC-Tsy-118836	Tarsius syrichta	38.60	1.00e-16	80.10
IUUC-Tni-120493	Tetraodon nigroviridis	38.56	5.00e-37	147.00
IUUC-Tre-121911	Trichoderma reesei	39.67	3.00e-27	115.00
IUUC-Tae-125354	Triticum aestivum	81.82	2.00e-98	351.00
IUUC-Tur-126610	Triticum urartu	82.23	3.00e-98	351.00
IUUC-Tme-127092	Tuber melanosporum	33.99	1.00e-37	149.00
IUUC-Tbe-127493	Tupaia belangeri	38.60	2.00e-17	82.40
IUUC-Uma-129484	Ustilago maydis	53.70	3.00e-12	65.50
IUUC-Vda-129946	Verticillium dahliae	48.09	1.00e-21	96.70
IUUC-Vvi-131039	Vitis vinifera	69.55	7.00e-94	336.00
IUUC-Xma-133503	Xiphophorus maculatus	32.27	7.00e-42	163.00
IUUC-Zma-135678	Zea mays	93.23	1.00e-128	452.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence