iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131171

UUCD1 version

UUC-ViV-00115

Ensembl Protein ID

VIT_04s0008g05780.t01

UniProt Accession

D7SUX1; D7SUX1_VITVI

Genbank Protein ID

CBI21070.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595231

Gene Name

TAF5; VIT_04s0008g05780

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0008g05780	VIT_04s0008g05780.t01	VIT_04s0008g05780.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-42	142.8	507	545
UBD/Beta-Prp	1.70e-67	228.3	350	665

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ +g +++
   Q: 507  GHLSDVDCVQWhiNCNYIATGSSDKTVRLWDVQSGECVR 545
           8***********988*********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...........................lrsl.sgheaevtavkfsp 62
           +++++h++  ++c  +s d+sl+a g+ d+++kvwd+++                                +l +gh+++v++ +fsp
   Q: 350  TFINTHNS--LNCSSISHDGSLVAGGFSDSSLKVWDMSKLGQqaatsimqgdndlapteqilgtsggkrSYTLfQGHSGPVYSATFSP 435
           55666666..56667777********************9444899**********************9966666************** PP
   S: 63   dgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgn 150
            g++++++s D ti++w+ + +  ++ +kgh++ v++++fsp g++++s shdrt+r+w ++  q l+ + +gh + v cv++h ++n
   Q: 436  LGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVQWHINCN 522
           ********************************************************************.******************* PP
   S: 151  llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlv 238
           ++++Gs D+tvrlWd+++g+++r + g h ++v sl+++++g++++sg++dgt+ +wdl++g+cv+ l gh + v+s++fs ++ +l+
   Q: 523  YIATGSSDKTVRLWDVQSGECVRIFIG-HRSMVLSLAMSPDGQYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLLA 609
           **************************9.************************************************************ PP
   S: 239  sgssDgsiriWdlrsgdllktlqlhn..............ssvisvavlsfgdnvl 280
           sgs+D ++++Wd+++++ +   +  +              +++++v  l+f++++l
   Q: 610  SGSADSTVKLWDVTTSTKVPRSEENKsgntsrlrslktlpTKSTPVYSLRFSRRNL 665
           ************99999888877777777777777777777777777777776555 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEEEEIEKAV IAYLKKKGFK QTELAFQEEH HQHQNQQTKN SSSSISSSTD PDIAKHILSF 60
SESENIPARY HEGYSKLRSW TYSSLDLYKH ELLRVLYPVF IHCFMDLVAK GHIQEARNFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCCAGTGA AAATTCCGAG AAAGAAAAAG AATCACGGAC CCTTGCCCTA AGGTCGATAT 60
ACGATTAGGA AACCTTCCCC TGGCGCTAGT TTCTGACTTC TGAGAGGGAC AATGGAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vvi:100254222

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	64.57	0.00e+00	745.00
IUUC-Aml-001607	Ailuropoda melanoleuca	45.57	2.00e-95	343.00
IUUC-Atr-003136	Amborella trichopoda	75.22	0.00e+00	1013.00
IUUC-Apl-004193	Anas platyrhynchos	44.79	7.00e-94	337.00
IUUC-Aca-004522	Anolis carolinensis	37.66	3.00e-117	415.00
IUUC-Aly-006476	Arabidopsis lyrata	75.37	0.00e+00	997.00
IUUC-Ath-006587	Arabidopsis thaliana	75.96	0.00e+00	1005.00
IUUC-Ago-007736	Ashbya gossypii	34.14	5.00e-109	387.00
IUUC-Acl-008092	Aspergillus clavatus	31.06	2.00e-92	332.00
IUUC-Afl-008659	Aspergillus flavus	31.00	7.00e-92	330.00
IUUC-Afu-008902	Aspergillus fumigatus	31.23	1.00e-91	330.00
IUUC-Ani-009462	Aspergillus nidulans	31.10	1.00e-75	276.00
IUUC-Aor-010083	Aspergillus oryzae	31.00	7.00e-92	330.00
IUUC-Ate-010271	Aspergillus terreus	30.49	1.00e-88	320.00
IUUC-Ame-010721	Astyanax mexicanus	35.80	9.00e-114	403.00
IUUC-Bgr-012257	Blumeria graminis	28.59	6.00e-78	284.00
IUUC-Bta-013539	Bos taurus	45.57	1.00e-95	343.00
IUUC-Bci-013737	Botrytis cinerea	28.65	1.00e-82	300.00
IUUC-Bdi-015041	Brachypodium distachyon	72.74	0.00e+00	877.00
IUUC-Bol-015483	Brassica oleracea	75.07	0.00e+00	994.00
IUUC-Bra-017147	Brassica rapa	75.52	0.00e+00	998.00
IUUC-Cel-018451	Caenorhabditis elegans	29.02	2.00e-60	226.00
IUUC-Cja-018881	Callithrix jacchus	45.31	5.00e-95	341.00
IUUC-Cfa-020056	Canis familiaris	45.57	1.00e-95	343.00
IUUC-Cpo-021454	Cavia porcellus	37.36	1.00e-117	416.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	38.26	9.00e-64	236.00
IUUC-Csa-023045	Chlorocebus sabaeus	45.31	9.00e-95	340.00
IUUC-Cho-024284	Choloepus hoffmanni	48.75	5.00e-78	284.00
IUUC-Cin-025457	Ciona intestinalis	51.55	6.00e-74	269.00
IUUC-Csv-025882	Ciona savignyi	34.11	1.00e-93	336.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	27.43	1.00e-72	266.00
IUUC-Cne-026876	Cryptococcus neoformans	31.06	6.00e-79	288.00
IUUC-Cme-027302	Cyanidioschyzon merolae	35.80	4.00e-114	404.00
IUUC-Dre-027980	Danio rerio	36.59	3.00e-113	402.00
IUUC-Dno-028863	Dasypus novemcinctus	45.31	6.00e-95	341.00
IUUC-Dor-030561	Dipodomys ordii	45.31	4.00e-95	341.00
IUUC-Dse-031547	Dothistroma septosporum	32.46	1.00e-92	333.00
IUUC-Dme-031917	Drosophila melanogaster	44.16	2.00e-79	289.00
IUUC-Ete-032712	Echinops telfairi	41.71	3.00e-74	271.00
IUUC-Eca-033927	Equus caballus	37.95	5.00e-118	417.00
IUUC-Eeu-034449	Erinaceus europaeus	46.65	6.00e-88	317.00
IUUC-Fca-036325	Felis catus	45.57	1.00e-95	343.00
IUUC-Fal-036604	Ficedula albicollis	44.82	5.00e-93	334.00
IUUC-Fox-038049	Fusarium oxysporum	30.63	3.00e-47	182.00
IUUC-Fso-038302	Fusarium solani	28.66	2.00e-68	253.00
IUUC-Gmo-038832	Gadus morhua	36.12	8.00e-107	380.00
IUUC-Ggr-039878	Gaeumannomyces graminis	27.63	2.00e-70	259.00
IUUC-Gga-041147	Gallus gallus	37.83	5.00e-117	414.00
IUUC-Gac-041373	Gasterosteus aculeatus	44.23	6.00e-91	327.00
IUUC-Gma-043230	Glycine max	80.47	0.00e+00	1073.00
IUUC-Ggo-044568	Gorilla gorilla	40.66	3.00e-76	278.00
IUUC-Hsa-045971	Homo sapiens	45.31	5.00e-95	341.00
IUUC-Hvu-047695	Hordeum vulgare	75.10	0.00e+00	686.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	45.05	1.00e-94	340.00
IUUC-Kpa-049402	Komagataella pastoris	33.99	1.00e-117	416.00
IUUC-Lch-049526	Latimeria chalumnae	42.94	6.00e-83	300.00
IUUC-Lpe-051560	Leersia perrieri	68.87	0.00e+00	891.00
IUUC-Loc-052882	Lepisosteus oculatus	45.35	8.00e-92	330.00
IUUC-Lma-053212	Leptosphaeria maculans	30.53	8.00e-77	280.00
IUUC-Laf-053859	Loxodonta africana	45.57	2.00e-95	342.00
IUUC-Mcc-054957	Macaca mulatta	45.31	2.00e-94	338.00
IUUC-Meu-056182	Macropus eugenii	42.82	3.00e-73	268.00
IUUC-Mor-057024	Magnaporthe oryzae	28.18	9.00e-69	254.00
IUUC-Mpo-057520	Magnaporthe poae	28.55	6.00e-69	254.00
IUUC-Mtr-058754	Medicago truncatula	79.59	0.00e+00	1116.00
IUUC-Mla-058881	Melampsora laricipopulina	40.16	3.00e-75	275.00
IUUC-Mga-059776	Meleagris gallopavo	37.83	9.00e-117	413.00
IUUC-Mvi-060208	Microbotryum violaceum	33.44	1.00e-85	310.00
IUUC-Mmr-061783	Microcebus murinus	45.31	2.00e-94	338.00
IUUC-Mdo-062856	Monodelphis domestica	37.81	7.00e-115	407.00
IUUC-Mmu-064218	Mus musculus	45.31	5.00e-95	341.00
IUUC-Mac-064886	Musa acuminata	68.10	8.00e-148	516.00
IUUC-Mpu-065735	Mustela putorius furo	45.57	1.00e-95	343.00
IUUC-Mlu-067544	Myotis lucifugus	45.45	5.00e-94	337.00
IUUC-Nfi-068502	Neosartorya fischeri	31.37	1.00e-91	330.00
IUUC-Ncr-068891	Neurospora crassa	29.39	3.00e-73	268.00
IUUC-Nle-069389	Nomascus leucogenys	45.31	4.00e-95	341.00
IUUC-Opr-071042	Ochotona princeps	43.26	8.00e-82	297.00
IUUC-Ont-071455	Oreochromis niloticus	46.22	3.00e-95	342.00
IUUC-Oan-073181	Ornithorhynchus anatinus	45.55	2.00e-94	339.00
IUUC-Ocu-073758	Oryctolagus cuniculus	38.10	7.00e-118	417.00
IUUC-Oba-075739	Oryza barthii	65.41	0.00e+00	807.00
IUUC-Obr-076111	Oryza brachyantha	73.00	0.00e+00	961.00
IUUC-Ogl-077914	Oryza glaberrima	69.28	0.00e+00	898.00
IUUC-Ogu-078057	Oryza glumaepatula	62.01	0.00e+00	756.00
IUUC-Oin-079473	Oryza indica	70.53	0.00e+00	910.00
IUUC-Olo-080645	Oryza longistaminata	72.98	1.00e-125	442.00
IUUC-Ome-081831	Oryza meridionalis	61.95	0.00e+00	756.00
IUUC-Oni-082441	Oryza nivara	62.71	0.00e+00	763.00
IUUC-Opu-083239	Oryza punctata	61.06	0.00e+00	756.00
IUUC-Oru-085131	Oryza rufipogon	62.86	0.00e+00	765.00
IUUC-Osa-086189	Oryza sativa	70.23	0.00e+00	904.00
IUUC-Ola-086574	Oryzias latipes	45.87	1.00e-92	333.00
IUUC-Olu-087616	Ostreococcus lucimarinus	39.43	4.00e-130	457.00
IUUC-Oga-088827	Otolemur garnettii	45.05	7.00e-95	340.00
IUUC-Oar-089648	Ovis aries	45.57	1.00e-95	343.00
IUUC-Ptr-091195	Pan troglodytes	45.31	5.00e-95	341.00
IUUC-Pan-091978	Papio anubis	45.31	5.00e-95	341.00
IUUC-Psi-093598	Pelodiscus sinensis	37.21	4.00e-104	370.00
IUUC-Pma-094593	Petromyzon marinus	41.38	7.00e-61	227.00
IUUC-Pno-094823	Phaeosphaeria nodorum	31.76	8.00e-84	303.00
IUUC-Ppa-095455	Physcomitrella patens	60.35	0.00e+00	803.00
IUUC-Pfo-097120	Poecilia formosa	47.28	3.00e-95	342.00
IUUC-Pab-098771	Pongo abelii	45.31	4.00e-95	341.00
IUUC-Pop-099542	Populus trichocarpa	81.19	0.00e+00	1095.00
IUUC-Pca-100727	Procavia capensis	42.98	6.00e-75	274.00
IUUC-Ppe-101686	Prunus persica	83.70	0.00e+00	1152.00
IUUC-Pva-102414	Pteropus vampyrus	39.06	9.00e-72	264.00
IUUC-Pgr-103603	Puccinia graminis	43.45	2.00e-68	253.00
IUUC-Ptt-103995	Puccinia triticina	43.12	5.00e-64	238.00
IUUC-Pte-104359	Pyrenophora teres	31.35	8.00e-85	307.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	30.94	2.00e-84	305.00
IUUC-Rno-105064	Rattus norvegicus	45.31	6.00e-95	341.00
IUUC-Sce-106186	Saccharomyces cerevisiae	33.42	1.00e-106	380.00
IUUC-Sha-106582	Sarcophilus harrisii	38.11	1.00e-116	412.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	35.31	8.00e-114	403.00
IUUC-Spo-108142	Schizosaccharomyces pombe	34.15	1.00e-113	403.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	29.34	8.00e-83	300.00
IUUC-Smo-109111	Selaginella moellendorffii	61.01	0.00e+00	734.00
IUUC-Sit-109804	Setaria italica	73.48	0.00e+00	974.00
IUUC-Sly-111693	Solanum lycopersicum	77.43	0.00e+00	1067.00
IUUC-Sar-113381	Sorex araneus	40.92	2.00e-78	285.00
IUUC-Sbi-114849	Sorghum bicolor	72.89	0.00e+00	962.00
IUUC-Sre-114945	Sporisorium reilianum	38.33	2.00e-73	270.00
IUUC-Ssc-115582	Sus scrofa	46.52	5.00e-94	337.00
IUUC-Tgu-116899	Taeniopygia guttata	44.53	1.00e-93	336.00
IUUC-Tru-118011	Takifugu rubripes	45.35	1.00e-92	333.00
IUUC-Tsy-119622	Tarsius syrichta	33.24	2.00e-46	179.00
IUUC-Tni-120598	Tetraodon nigroviridis	44.79	7.00e-92	330.00
IUUC-Tca-121247	Theobroma cacao	81.70	0.00e+00	1113.00
IUUC-Tre-121949	Trichoderma reesei	27.55	9.00e-74	270.00
IUUC-Tvi-122626	Trichoderma virens	27.65	4.00e-71	261.00
IUUC-Tae-123335	Triticum aestivum	70.77	0.00e+00	888.00
IUUC-Tur-126005	Triticum urartu	64.53	0.00e+00	822.00
IUUC-Tme-126904	Tuber melanosporum	32.83	1.00e-107	382.00
IUUC-Tbe-127254	Tupaia belangeri	38.80	3.00e-73	268.00
IUUC-Ttr-128544	Tursiops truncatus	45.57	3.00e-95	342.00
IUUC-Uma-129379	Ustilago maydis	43.49	6.00e-72	265.00
IUUC-Vda-129761	Verticillium dahliae	37.93	3.00e-51	196.00
IUUC-Vpa-130485	Vicugna pacos	45.57	2.00e-95	342.00
IUUC-Xtr-132762	Xenopus tropicalis	33.44	4.00e-93	335.00
IUUC-Xma-133583	Xiphophorus maculatus	46.70	6.00e-94	337.00
IUUC-Yli-134446	Yarrowia lipolytica	39.69	7.00e-128	450.00
IUUC-Zma-135722	Zea mays	71.47	0.00e+00	963.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence