iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000010625.1	ENSSHAT00000012508.1	ENSSHAP00000012406.1
ENSSHAG00000010625.1	ENSSHAT00000012509.1	ENSSHAP00000012407.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.60e-12	47.6	84	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggede......k....slveCekCrewfHpaClkls.....veeelpnsekwiCpkCrs 53
           +vCl+Cge+g+++      +    sl+eC++C+e++Hp+Clk+      +++e pn+  w+Cp+C++
   Q: 84   AVCLLCGEAGKEDtvegeeEkfalSLMECTICNEIVHPGCLKMGkaegvINTEIPNC--WECPRCTQ 148
           79**********977776516889*******************99************..******97 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

SGISGRGEPG PSALLTPPMS SSGRGPGAGA RRRRTRCRRC RACVRTECGD CHFCRDMKKF 60
GGPGRMKQSC LLRQCTAPVL PHTAVCLLCG EAGKEDTVEG EEEKFALSLM ECTICNEIVH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
CCAGGAACCA GCGGTGGGAA GGGCCTGGAC CCTGGGAAAC GGGGAGGGGG GGGTGGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00256--FBOX
SM00367--LRR_CC
SM00249--PHD

Gene Ontology

GO:0019005--C:SCF ubiquitin ligase complex
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001680	Ailuropoda melanoleuca	85.76	0.00e+00	839.00
IUUC-Aca-004456	Anolis carolinensis	61.72	0.00e+00	699.00
IUUC-Ame-010726	Astyanax mexicanus	60.00	1.00e-96	347.00
IUUC-Bta-012874	Bos taurus	89.57	0.00e+00	912.00
IUUC-Cja-019918	Callithrix jacchus	88.97	0.00e+00	905.00
IUUC-Cfa-020078	Canis familiaris	88.13	0.00e+00	880.00
IUUC-Cpo-021482	Cavia porcellus	88.25	0.00e+00	885.00
IUUC-Csa-023072	Chlorocebus sabaeus	89.18	0.00e+00	906.00
IUUC-Dno-029532	Dasypus novemcinctus	79.72	0.00e+00	760.00
IUUC-Dor-030932	Dipodomys ordii	87.48	0.00e+00	875.00
IUUC-Eca-033707	Equus caballus	90.57	0.00e+00	889.00
IUUC-Eeu-034841	Erinaceus europaeus	85.35	4.00e-134	471.00
IUUC-Fca-036214	Felis catus	89.13	0.00e+00	882.00
IUUC-Gmo-039631	Gadus morhua	62.18	2.00e-83	303.00
IUUC-Ggo-045362	Gorilla gorilla	86.93	0.00e+00	817.00
IUUC-Hsa-046325	Homo sapiens	88.28	0.00e+00	885.00
IUUC-Itr-048488	Ictidomys tridecemlineatus	88.25	0.00e+00	880.00
IUUC-Laf-053994	Loxodonta africana	84.69	0.00e+00	676.00
IUUC-Mcc-054810	Macaca mulatta	88.25	0.00e+00	880.00
IUUC-Meu-056447	Macropus eugenii	100.00	8.00e-148	517.00
IUUC-Mmr-060961	Microcebus murinus	88.86	0.00e+00	907.00
IUUC-Mmu-063602	Mus musculus	88.87	0.00e+00	907.00
IUUC-Mpu-066470	Mustela putorius furo	88.56	0.00e+00	879.00
IUUC-Mlu-068033	Myotis lucifugus	84.72	0.00e+00	755.00
IUUC-Nle-069352	Nomascus leucogenys	87.99	0.00e+00	878.00
IUUC-Opr-070370	Ochotona princeps	86.39	0.00e+00	813.00
IUUC-Ont-071246	Oreochromis niloticus	61.82	1.00e-92	333.00
IUUC-Ocu-074480	Oryctolagus cuniculus	87.08	0.00e+00	867.00
IUUC-Oba-075194	Oryza barthii	46.43	1.80e-01	29.30
IUUC-Oga-088335	Otolemur garnettii	88.37	0.00e+00	882.00
IUUC-Oar-090135	Ovis aries	97.34	6.00e-119	421.00
IUUC-Ptr-091271	Pan troglodytes	96.63	2.00e-171	594.00
IUUC-Pan-092365	Papio anubis	89.40	0.00e+00	912.00
IUUC-Pab-097786	Pongo abelii	81.61	0.00e+00	771.00
IUUC-Pca-100857	Procavia capensis	83.74	3.00e-140	492.00
IUUC-Pva-102613	Pteropus vampyrus	90.42	0.00e+00	890.00
IUUC-Rno-106113	Rattus norvegicus	88.41	0.00e+00	892.00
IUUC-Ssc-115503	Sus scrofa	87.75	0.00e+00	861.00
IUUC-Tru-118079	Takifugu rubripes	64.00	5.00e-92	332.00
IUUC-Tni-120597	Tetraodon nigroviridis	63.27	1.00e-88	320.00
IUUC-Tur-126327	Triticum urartu	35.06	3.00e-04	39.70
IUUC-Tbe-127536	Tupaia belangeri	85.38	0.00e+00	823.00
IUUC-Ttr-128198	Tursiops truncatus	88.03	0.00e+00	858.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence