iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-07	32.3	20	48

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkw 29
           CaiCl+ f d p++ +CgH f++ C+ q w
   Q: 20   CAICLDYFTD-PVSIGCGHNFCRVCVtQLW 48
           **********.**************98888 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAVAMTPNP VQTLQEEAVC AICLDYFTDP VSIGCGHNFC RVCVTQLWGG EDEEDRDELD 60
REEEEEVGEE EEVEAVGAGG GWDTPMRDED YEGDMEEEAE EEEEGVFWSS GIGGSNWDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCTGGGAG TCCCTTCTGC AGTCGTCCGT GCCTGGTCGG TAGGATGGCG CTAGGCCGCT 60
GCGATTGTAG CACGGAGAAC AGGGCGCTGC TCAACGTCCT CGCTACCCTC CGCCGTCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0016604--C:nuclear body
GO:0005730--C:nucleolus
GO:0008270--F:zinc ion binding

KEGG

rno:303088

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001322	Ailuropoda melanoleuca	94.73	0.00e+00	756.00
IUUC-Apl-003945	Anas platyrhynchos	48.16	1.00e-116	412.00
IUUC-Aca-005336	Anolis carolinensis	50.76	5.00e-125	441.00
IUUC-Bta-013326	Bos taurus	96.02	0.00e+00	772.00
IUUC-Cja-019205	Callithrix jacchus	86.46	0.00e+00	844.00
IUUC-Cfa-021129	Canis familiaris	96.26	0.00e+00	738.00
IUUC-Cpo-021839	Cavia porcellus	79.62	0.00e+00	872.00
IUUC-Csa-023274	Chlorocebus sabaeus	96.18	5.00e-165	573.00
IUUC-Dno-029811	Dasypus novemcinctus	92.53	0.00e+00	848.00
IUUC-Dor-030241	Dipodomys ordii	91.88	0.00e+00	850.00
IUUC-Ete-032275	Echinops telfairi	93.85	0.00e+00	752.00
IUUC-Eca-033589	Equus caballus	94.69	0.00e+00	728.00
IUUC-Eeu-034925	Erinaceus europaeus	93.31	6.00e-153	533.00
IUUC-Fca-035840	Felis catus	96.48	0.00e+00	740.00
IUUC-Gga-041240	Gallus gallus	53.08	6.00e-132	464.00
IUUC-Ggo-044681	Gorilla gorilla	95.79	1.00e-145	510.00
IUUC-Hsa-046509	Homo sapiens	95.96	0.00e+00	717.00
IUUC-Itr-049027	Ictidomys tridecemlineatus	94.90	0.00e+00	896.00
IUUC-Laf-053825	Loxodonta africana	87.94	0.00e+00	853.00
IUUC-Mcc-055711	Macaca mulatta	93.87	0.00e+00	717.00
IUUC-Meu-056203	Macropus eugenii	81.20	4.00e-90	325.00
IUUC-Mga-059640	Meleagris gallopavo	50.37	2.00e-72	265.00
IUUC-Mmr-060876	Microcebus murinus	96.70	0.00e+00	746.00
IUUC-Mdo-062529	Monodelphis domestica	88.91	0.00e+00	689.00
IUUC-Mmu-063812	Mus musculus	96.83	0.00e+00	947.00
IUUC-Mpu-066336	Mustela putorius furo	96.48	0.00e+00	738.00
IUUC-Mlu-067141	Myotis lucifugus	86.05	0.00e+00	811.00
IUUC-Nle-069155	Nomascus leucogenys	95.28	1.00e-164	572.00
IUUC-Opr-070782	Ochotona princeps	74.09	2.00e-117	415.00
IUUC-Ocu-073999	Oryctolagus cuniculus	89.57	0.00e+00	863.00
IUUC-Oga-088046	Otolemur garnettii	95.82	0.00e+00	741.00
IUUC-Oar-090410	Ovis aries	91.81	0.00e+00	721.00
IUUC-Pan-092338	Papio anubis	96.18	4.00e-164	571.00
IUUC-Pab-098117	Pongo abelii	95.86	9.00e-165	573.00
IUUC-Pop-099794	Populus trichocarpa	41.86	5.00e-07	47.00
IUUC-Pca-100768	Procavia capensis	96.20	7.00e-85	308.00
IUUC-Pva-102341	Pteropus vampyrus	90.10	0.00e+00	715.00
IUUC-Sha-106482	Sarcophilus harrisii	87.80	0.00e+00	680.00
IUUC-Sar-113654	Sorex araneus	90.99	0.00e+00	750.00
IUUC-Ssc-115807	Sus scrofa	94.24	4.00e-117	415.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence