iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000011039.1	ENSSHAT00000013011.1	ENSSHAP00000012905.1
ENSSHAG00000011039.1	ENSSHAT00000013012.1	ENSSHAP00000012906.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.10e-10	39.5	77	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek......slveCekCrewfHpaClkls....veeelpnsekwiCpkC 51
            C +Cge +++e+      +l+eC++C+e++Hp+Cl++      ++elpn+  w+CpkC
   Q: 77   TCSLCGEVDQNEEtqdfekKLMECCICNEVVHPGCLQMDgeglLNDELPNC--WECPKC 133
           7*********995555666***********************99*******..****** PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MKRSPRLPPP VRPTPSPPVS GARRRRVRCR KCEACVQGEC GVCRYCRDMK KFGGPGRMKQ 60
SCVLRQCLAP RLPYSVTCSL CGEVDQNEET QDFEKKLMEC CICNEVVHPG CLQMDGEGLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGACGTCC ACGCTTGTTC AGTACATTCG AAGATACGGA GAGGTAGGAG ATCCAACTTG 60
CCCAGCCTAA CTTCCAGCCC CCCTCCCCCA AGCAAACAGA GGCTCCGGGG ACACTTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00367--LRR_CC
SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dor-031142	Dipodomys ordii	84.09	0.00e+00	878.00
IUUC-Ggo-045330	Gorilla gorilla	83.22	0.00e+00	697.00
IUUC-Loc-051744	Lepisosteus oculatus	73.80	2.00e-118	420.00
IUUC-Mdo-062164	Monodelphis domestica	88.80	0.00e+00	1025.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence