iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015576

Ensembl Protein ID

Bo5g016440.1

UniProt Accession

A0A0D3C9I0; A0A0D3C9I0_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g016440	Bo5g016440.1	Bo5g016440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-08	36.0	214	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H++sv+++a+   s+ ++++++dD +  +WD++
   Q: 214  HQASVNAIAWaphSSSHICTAGDDSQALIWDIS 246
           99*********86449***************75 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MRLWWQLNLT GEALNKLFSY LLISTSLVLL YLLTLQAAAD GDGDETMKDI AEPVIHLRKE 60
FKSFGSFHGR SFMISQGNVA VLMKWFQGSR RRFRKEYSSI WHRWRYKTLE CASVLYVRDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGATTGT GGTGGCAGTT GAACTTAACC GGAGAAGCTC TTAATAAGTT ATTCTCATAT 60
CTGCTTATAT CAACGTCCCT TGTCCTGCTT TATTTGCTCA CCTTACAAGC TGCAGCTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0043153--P:entrainment of circadian clock by photoperiod
GO:0048573--P:photoperiodism, flowering

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence