iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026458

Ensembl Protein ID

ELA35528

UniProt Accession

L2GBX0; L2GBX0_COLGN

Genbank Protein ID

ELA35528.1

Protein Name

WD repeat protein

Genbank Nucleotide ID

KB020564

Gene Name

CGGC5_4771

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_4771	ELA35528	ELA35528

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-24	83.0	118	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gH+++++c+af  ++  l++s++ D +++vWD ++
   Q: 118  GHSSRINCVAFggDGdSLVISAGFDTSVRVWDCKS 152
           8***********8335999*************865 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MSFPDRPVAH LLGSNGPVHA VTYSSSPGTY ILTGSADRTI RLYNPATQDA NPRYTSNLTT 60
RTTPRVPEGR MIQSYASHGY EVLDLAVAAD NERFASCGGD RAVFLWGVAS ATTLRRPGHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATTTC CTGACAGACC TGTCGCCCAC TTGCTGGGCT CGAATGGTGA GTCGCGAACT 60
CGGGACACGA CTTTGAGATG CGAACCCCTT CGCACTCATA TCTTTCAAGT CGCCAAGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	37.85	4.00e-52	196.00
IUUC-Atr-002647	Amborella trichopoda	35.43	9.00e-50	188.00
IUUC-Aca-004948	Anolis carolinensis	37.23	3.00e-52	196.00
IUUC-Aly-006489	Arabidopsis lyrata	37.58	9.00e-47	178.00
IUUC-Ath-007099	Arabidopsis thaliana	37.01	1.00e-46	178.00
IUUC-Acl-008374	Aspergillus clavatus	39.36	2.00e-64	237.00
IUUC-Afl-008506	Aspergillus flavus	38.84	5.00e-64	236.00
IUUC-Afu-009098	Aspergillus fumigatus	36.59	6.00e-58	216.00
IUUC-Ang-009705	Aspergillus niger	41.88	2.00e-60	224.00
IUUC-Aor-010031	Aspergillus oryzae	38.84	4.00e-64	236.00
IUUC-Ate-010335	Aspergillus terreus	50.45	2.00e-23	100.00
IUUC-Ame-011056	Astyanax mexicanus	35.12	3.00e-46	177.00
IUUC-Bgr-012109	Blumeria graminis	52.00	6.00e-96	342.00
IUUC-Bta-012476	Bos taurus	37.15	9.00e-52	195.00
IUUC-Bci-013860	Botrytis cinerea	49.86	5.00e-92	328.00
IUUC-Bdi-014565	Brachypodium distachyon	34.24	3.00e-47	179.00
IUUC-Bol-016204	Brassica oleracea	36.63	2.00e-47	180.00
IUUC-Bra-018093	Brassica rapa	36.63	2.00e-47	180.00
IUUC-Cel-018500	Caenorhabditis elegans	31.74	1.00e-35	141.00
IUUC-Cja-019279	Callithrix jacchus	38.77	1.00e-50	191.00
IUUC-Cfa-020516	Canis familiaris	37.50	1.00e-51	195.00
IUUC-Cpo-021427	Cavia porcellus	37.41	1.00e-50	191.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	38.68	3.00e-47	180.00
IUUC-Csa-023449	Chlorocebus sabaeus	38.41	6.00e-51	192.00
IUUC-Cin-025637	Ciona intestinalis	36.42	3.00e-50	190.00
IUUC-Cne-026994	Cryptococcus neoformans	37.50	5.00e-46	176.00
IUUC-Dre-028239	Danio rerio	34.55	5.00e-46	176.00
IUUC-Dno-029408	Dasypus novemcinctus	37.85	2.00e-52	197.00
IUUC-Dor-030684	Dipodomys ordii	41.07	3.00e-34	137.00
IUUC-Dse-031344	Dothistroma septosporum	47.90	1.00e-61	228.00
IUUC-Dme-031634	Drosophila melanogaster	31.02	6.00e-36	142.00
IUUC-Ete-033126	Echinops telfairi	33.21	6.00e-39	152.00
IUUC-Eca-034356	Equus caballus	34.03	1.00e-39	154.00
IUUC-Eeu-035196	Erinaceus europaeus	37.13	1.00e-28	118.00
IUUC-Fca-036231	Felis catus	38.19	3.00e-52	196.00
IUUC-Fox-038076	Fusarium oxysporum	62.32	2.00e-129	453.00
IUUC-Fso-038093	Fusarium solani	63.19	2.00e-120	423.00
IUUC-Gmo-039056	Gadus morhua	32.73	1.00e-44	171.00
IUUC-Ggr-039981	Gaeumannomyces graminis	54.76	8.00e-116	408.00
IUUC-Gga-041042	Gallus gallus	36.71	2.00e-51	194.00
IUUC-Gac-042638	Gasterosteus aculeatus	34.56	6.00e-46	175.00
IUUC-Gma-042723	Glycine max	36.09	2.00e-51	194.00
IUUC-Ggo-044720	Gorilla gorilla	38.77	6.00e-51	192.00
IUUC-Hsa-046056	Homo sapiens	39.13	2.00e-51	194.00
IUUC-Hvu-047675	Hordeum vulgare	39.91	9.00e-47	178.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	37.41	6.00e-52	196.00
IUUC-Lch-050634	Latimeria chalumnae	36.59	5.00e-45	172.00
IUUC-Lpe-051470	Leersia perrieri	36.95	1.00e-49	188.00
IUUC-Loc-052452	Lepisosteus oculatus	34.05	8.00e-46	175.00
IUUC-Lma-053235	Leptosphaeria maculans	53.33	2.00e-52	197.00
IUUC-Laf-054315	Loxodonta africana	38.89	7.00e-51	192.00
IUUC-Mcc-054923	Macaca mulatta	38.04	2.00e-50	190.00
IUUC-Mor-056936	Magnaporthe oryzae	57.22	3.00e-103	366.00
IUUC-Mpo-057529	Magnaporthe poae	56.52	9.00e-26	108.00
IUUC-Mtr-058595	Medicago truncatula	36.30	2.00e-51	194.00
IUUC-Mla-058902	Melampsora laricipopulina	39.53	9.00e-55	205.00
IUUC-Mvi-060471	Microbotryum violaceum	41.64	3.00e-56	209.00
IUUC-Mmr-061665	Microcebus murinus	37.85	4.00e-52	196.00
IUUC-Mdo-062750	Monodelphis domestica	37.15	8.00e-45	172.00
IUUC-Mmu-063750	Mus musculus	37.15	3.00e-51	193.00
IUUC-Mac-065441	Musa acuminata	36.42	2.00e-53	200.00
IUUC-Mpu-066863	Mustela putorius furo	37.50	9.00e-52	195.00
IUUC-Mlu-067645	Myotis lucifugus	37.85	1.00e-51	194.00
IUUC-Nfi-068549	Neosartorya fischeri	40.29	2.00e-63	234.00
IUUC-Ncr-068816	Neurospora crassa	53.26	2.00e-85	307.00
IUUC-Nle-069457	Nomascus leucogenys	38.77	3.00e-51	193.00
IUUC-Ont-071674	Oreochromis niloticus	32.00	3.00e-37	146.00
IUUC-Oan-073391	Ornithorhynchus anatinus	37.15	2.00e-51	194.00
IUUC-Ocu-074186	Oryctolagus cuniculus	36.89	2.00e-48	184.00
IUUC-Oba-075414	Oryza barthii	35.49	2.00e-47	181.00
IUUC-Obr-076739	Oryza brachyantha	35.25	1.00e-47	181.00
IUUC-Ogl-076962	Oryza glaberrima	35.59	3.00e-48	183.00
IUUC-Ogu-078831	Oryza glumaepatula	35.25	6.00e-48	182.00
IUUC-Oin-079985	Oryza indica	35.59	3.00e-48	183.00
IUUC-Ome-081333	Oryza meridionalis	36.46	7.00e-48	182.00
IUUC-Oni-082558	Oryza nivara	35.59	3.00e-48	183.00
IUUC-Opu-084091	Oryza punctata	35.25	5.00e-48	182.00
IUUC-Oru-085253	Oryza rufipogon	35.61	4.00e-47	179.00
IUUC-Osa-086077	Oryza sativa	35.59	3.00e-48	183.00
IUUC-Ola-086946	Oryzias latipes	33.90	8.00e-46	175.00
IUUC-Olu-087604	Ostreococcus lucimarinus	33.64	1.00e-40	157.00
IUUC-Oga-088681	Otolemur garnettii	37.15	1.00e-51	194.00
IUUC-Oar-089913	Ovis aries	36.81	1.00e-51	194.00
IUUC-Ptr-091343	Pan troglodytes	38.77	3.00e-51	193.00
IUUC-Pan-092078	Papio anubis	38.41	6.00e-51	192.00
IUUC-Psi-093190	Pelodiscus sinensis	36.36	9.00e-53	198.00
IUUC-Pno-095078	Phaeosphaeria nodorum	44.31	3.00e-74	270.00
IUUC-Ppa-095777	Physcomitrella patens	37.62	2.00e-49	187.00
IUUC-Pfo-097153	Poecilia formosa	34.18	1.00e-45	175.00
IUUC-Pab-098307	Pongo abelii	38.41	2.00e-50	191.00
IUUC-Pop-099315	Populus trichocarpa	35.64	2.00e-44	170.00
IUUC-Pca-100538	Procavia capensis	39.16	9.00e-49	185.00
IUUC-Ppe-101632	Prunus persica	36.36	7.00e-51	192.00
IUUC-Pva-102484	Pteropus vampyrus	38.19	6.00e-52	196.00
IUUC-Pgr-103495	Puccinia graminis	42.59	6.00e-55	205.00
IUUC-Ptt-103975	Puccinia triticina	41.85	2.00e-54	203.00
IUUC-Pte-104354	Pyrenophora teres	42.40	5.00e-62	229.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	43.27	2.00e-60	224.00
IUUC-Rno-105655	Rattus norvegicus	36.81	8.00e-51	192.00
IUUC-Sha-107130	Sarcophilus harrisii	42.29	6.00e-37	145.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	38.53	4.00e-40	156.00
IUUC-Spo-108131	Schizosaccharomyces pombe	36.50	2.00e-39	153.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	50.83	8.00e-98	348.00
IUUC-Smo-109004	Selaginella moellendorffii	36.84	5.00e-45	172.00
IUUC-Sit-110508	Setaria italica	34.32	4.00e-47	179.00
IUUC-Sly-111093	Solanum lycopersicum	37.05	2.00e-46	177.00
IUUC-Stu-112380	Solanum tuberosum	37.38	1.00e-46	177.00
IUUC-Sar-113127	Sorex araneus	33.78	2.00e-16	77.80
IUUC-Sbi-114461	Sorghum bicolor	34.32	7.00e-47	179.00
IUUC-Sre-115020	Sporisorium reilianum	35.77	2.00e-28	119.00
IUUC-Ssc-115632	Sus scrofa	38.19	2.00e-52	197.00
IUUC-Tru-118039	Takifugu rubripes	34.11	1.00e-41	161.00
IUUC-Tsy-119239	Tarsius syrichta	36.11	5.00e-29	119.00
IUUC-Tni-120097	Tetraodon nigroviridis	32.45	1.00e-38	151.00
IUUC-Tca-121695	Theobroma cacao	35.31	3.00e-50	190.00
IUUC-Tre-122182	Trichoderma reesei	63.74	1.00e-127	447.00
IUUC-Tvi-122429	Trichoderma virens	63.77	2.00e-126	443.00
IUUC-Tae-125649	Triticum aestivum	36.14	3.00e-49	187.00
IUUC-Tur-126216	Triticum urartu	35.93	2.00e-49	187.00
IUUC-Tme-127030	Tuber melanosporum	44.48	5.00e-64	235.00
IUUC-Tbe-127686	Tupaia belangeri	36.68	3.00e-33	133.00
IUUC-Ttr-128770	Tursiops truncatus	37.73	7.00e-50	189.00
IUUC-Uma-129446	Ustilago maydis	37.54	5.00e-38	150.00
IUUC-Vda-129680	Verticillium dahliae	65.85	2.00e-85	306.00
IUUC-Vvi-131292	Vitis vinifera	35.64	3.00e-50	189.00
IUUC-Xtr-132204	Xenopus tropicalis	33.56	8.00e-49	185.00
IUUC-Xma-133727	Xiphophorus maculatus	33.82	3.00e-44	170.00
IUUC-Zma-135908	Zea mays	33.99	4.00e-41	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence