iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069457

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01089263

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000012710.2	ENSNLET00000016217.2	ENSNLEP00000015430.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-32	110.0	107	142
UBD/Beta-Prp	6.50e-51	173.2	15	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 107  GHAGKVNTVQFnEEaTVILSGSIDSSIRCWDCRSRR 142
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
           +k l++l   +++v+av+f+ dg++ +t+++D+t+k+w++  g+ ++t++gh ++vl+ + s +++ l sG+ d+ + +wd+ +gq+++
   Q: 15   QKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSNLCSGGGDKAVVLWDVASGQVVR 103
           56778888889999999999999999999999999999999999999999999999999888888999999999999999999999999 PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
             ++gh g vn+v++++++ ++ sGs D+ +r Wd   ++ + ++tl +   d v s+++++   e+++gs dg+v+ +dl+ g+    
   Q: 104  -KFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCrsRRPEPVQTLDE-ARDGVSSVKVSD--HEVLAGSVDGRVRRYDLRMGQLFSD 188
           .999999999999999999999999999999999986667788999987.899999999999..7899999999999999998877666 PP
   S: 218  l 218
           +
   Q: 189  Y 189
           5 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAFPEPKPRP PELPQKRLKT LDCGQGAVRA VRFNVDGNYC LTCGSDKTLK LWNPLRGTLL 60
RTYSGHGYEV LDAAGSFDNS NLCSGGGDKA VVLWDVASGQ VVRKFRGHAG KVNTVQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTCC CTGAGCCAAA GCCGCGGCCT CCGGAGCTGC CGCAGAAACG GTTGAAGACG 60
CTGGACTGCG GGCAAGGGGC GGTACGAGCC GTACGATTTA ATGGTGAGCG CCTTCGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

nle:100596791

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	96.50	1.00e-180	624.00
IUUC-Atr-002647	Amborella trichopoda	49.49	1.00e-89	322.00
IUUC-Aca-004948	Anolis carolinensis	79.62	3.00e-146	510.00
IUUC-Aly-006489	Arabidopsis lyrata	50.51	3.00e-82	298.00
IUUC-Ath-007099	Arabidopsis thaliana	50.84	3.00e-82	298.00
IUUC-Acl-008374	Aspergillus clavatus	37.33	1.00e-49	189.00
IUUC-Afl-008506	Aspergillus flavus	38.33	1.00e-51	196.00
IUUC-Afu-009098	Aspergillus fumigatus	33.84	2.00e-44	172.00
IUUC-Ang-009705	Aspergillus niger	34.52	2.00e-46	179.00
IUUC-Aor-010031	Aspergillus oryzae	38.33	2.00e-51	196.00
IUUC-Ame-011056	Astyanax mexicanus	72.35	2.00e-139	488.00
IUUC-Bgr-012109	Blumeria graminis	41.55	1.00e-56	213.00
IUUC-Bta-012476	Bos taurus	95.56	2.00e-179	620.00
IUUC-Bci-013860	Botrytis cinerea	36.15	5.00e-46	178.00
IUUC-Bdi-014565	Brachypodium distachyon	49.49	6.00e-87	313.00
IUUC-Bol-016204	Brassica oleracea	50.85	3.00e-82	298.00
IUUC-Bra-018093	Brassica rapa	50.85	5.00e-82	297.00
IUUC-Cel-018500	Caenorhabditis elegans	48.12	2.00e-84	305.00
IUUC-Cja-019279	Callithrix jacchus	98.73	4.00e-173	600.00
IUUC-Cfa-020516	Canis familiaris	96.19	1.00e-180	625.00
IUUC-Cpo-021427	Cavia porcellus	93.33	3.00e-167	580.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	45.82	2.00e-74	272.00
IUUC-Csa-023449	Chlorocebus sabaeus	98.41	2.00e-173	601.00
IUUC-Cin-025637	Ciona intestinalis	57.91	3.00e-108	384.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	37.85	2.00e-51	196.00
IUUC-Cne-026994	Cryptococcus neoformans	35.83	9.00e-51	193.00
IUUC-Dre-028239	Danio rerio	73.25	9.00e-133	466.00
IUUC-Dno-029408	Dasypus novemcinctus	94.29	8.00e-178	615.00
IUUC-Dor-030684	Dipodomys ordii	96.10	2.00e-114	404.00
IUUC-Dse-031344	Dothistroma septosporum	45.80	3.00e-54	204.00
IUUC-Dme-031634	Drosophila melanogaster	47.57	5.00e-77	280.00
IUUC-Ete-033126	Echinops telfairi	86.03	8.00e-159	552.00
IUUC-Eca-034356	Equus caballus	88.25	2.00e-157	547.00
IUUC-Eeu-035196	Erinaceus europaeus	94.08	9.00e-80	290.00
IUUC-Fca-036231	Felis catus	95.24	3.00e-179	620.00
IUUC-Fox-038076	Fusarium oxysporum	37.37	1.00e-53	203.00
IUUC-Fso-038093	Fusarium solani	35.97	2.00e-45	176.00
IUUC-Gmo-039056	Gadus morhua	72.03	5.00e-133	466.00
IUUC-Ggr-039981	Gaeumannomyces graminis	34.35	5.00e-44	171.00
IUUC-Gga-041042	Gallus gallus	77.49	9.00e-150	522.00
IUUC-Gac-042638	Gasterosteus aculeatus	73.20	2.00e-136	478.00
IUUC-Gma-042689	Glycine max	50.68	1.00e-89	322.00
IUUC-Ggo-044720	Gorilla gorilla	98.73	1.00e-173	602.00
IUUC-Hsa-046056	Homo sapiens	98.73	3.00e-174	603.00
IUUC-Hvu-047675	Hordeum vulgare	46.91	1.00e-84	306.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	94.74	2.00e-172	597.00
IUUC-Lch-050634	Latimeria chalumnae	78.29	4.00e-133	467.00
IUUC-Lpe-051470	Leersia perrieri	49.66	8.00e-87	313.00
IUUC-Loc-052452	Lepisosteus oculatus	77.56	2.00e-135	474.00
IUUC-Lma-053235	Leptosphaeria maculans	40.95	1.00e-27	117.00
IUUC-Laf-054315	Loxodonta africana	95.87	4.00e-170	590.00
IUUC-Mcc-054923	Macaca mulatta	98.10	4.00e-173	600.00
IUUC-Mor-056936	Magnaporthe oryzae	37.50	1.00e-46	179.00
IUUC-Mtr-058595	Medicago truncatula	51.55	4.00e-89	321.00
IUUC-Mla-058902	Melampsora laricipopulina	39.50	7.00e-61	227.00
IUUC-Mvi-060471	Microbotryum violaceum	42.62	5.00e-72	264.00
IUUC-Mmr-061665	Microcebus murinus	96.83	0.00e+00	630.00
IUUC-Mdo-062750	Monodelphis domestica	82.69	5.00e-136	476.00
IUUC-Mmu-063750	Mus musculus	93.65	1.00e-177	615.00
IUUC-Mac-065441	Musa acuminata	50.68	5.00e-90	323.00
IUUC-Mpu-066863	Mustela putorius furo	95.24	6.00e-179	619.00
IUUC-Mlu-067645	Myotis lucifugus	95.24	5.00e-178	616.00
IUUC-Nfi-068549	Neosartorya fischeri	36.69	1.00e-48	187.00
IUUC-Ncr-068816	Neurospora crassa	35.22	7.00e-42	164.00
IUUC-Opr-070874	Ochotona princeps	93.84	1.00e-77	282.00
IUUC-Ont-071674	Oreochromis niloticus	73.08	2.00e-122	431.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.37	3.00e-152	530.00
IUUC-Ocu-074186	Oryctolagus cuniculus	93.97	2.00e-171	594.00
IUUC-Oba-075414	Oryza barthii	50.90	2.00e-84	305.00
IUUC-Obr-076739	Oryza brachyantha	48.63	3.00e-85	308.00
IUUC-Ogl-076962	Oryza glaberrima	49.49	3.00e-86	311.00
IUUC-Ogu-078831	Oryza glumaepatula	49.49	2.00e-86	311.00
IUUC-Oin-079985	Oryza indica	49.15	3.00e-86	311.00
IUUC-Ome-081333	Oryza meridionalis	48.89	3.00e-78	285.00
IUUC-Oni-082558	Oryza nivara	49.15	3.00e-86	311.00
IUUC-Opu-084091	Oryza punctata	49.83	2.00e-87	315.00
IUUC-Oru-085253	Oryza rufipogon	49.45	7.00e-81	293.00
IUUC-Osa-086077	Oryza sativa	49.15	3.00e-86	311.00
IUUC-Ola-086946	Oryzias latipes	72.29	2.00e-136	478.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.00	2.00e-53	202.00
IUUC-Oga-088681	Otolemur garnettii	94.55	1.00e-175	608.00
IUUC-Oar-089913	Ovis aries	94.60	2.00e-176	610.00
IUUC-Ptr-091343	Pan troglodytes	98.73	2.00e-172	597.00
IUUC-Pan-092078	Papio anubis	98.41	2.00e-173	601.00
IUUC-Psi-093190	Pelodiscus sinensis	80.13	9.00e-153	532.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.13	2.00e-53	202.00
IUUC-Ppa-095777	Physcomitrella patens	50.17	6.00e-89	320.00
IUUC-Pfo-097153	Poecilia formosa	74.59	9.00e-130	456.00
IUUC-Pab-098307	Pongo abelii	98.42	9.00e-172	595.00
IUUC-Pop-099315	Populus trichocarpa	51.86	1.00e-83	303.00
IUUC-Pca-100538	Procavia capensis	94.42	1.00e-149	521.00
IUUC-Ppe-101632	Prunus persica	49.15	4.00e-89	321.00
IUUC-Pva-102484	Pteropus vampyrus	97.14	0.00e+00	628.00
IUUC-Pgr-103495	Puccinia graminis	39.56	4.00e-63	234.00
IUUC-Ptt-103975	Puccinia triticina	38.65	2.00e-61	229.00
IUUC-Pte-104354	Pyrenophora teres	36.96	6.00e-42	164.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.68	9.00e-42	164.00
IUUC-Rno-105655	Rattus norvegicus	93.02	2.00e-176	610.00
IUUC-Sha-107130	Sarcophilus harrisii	83.12	9.00e-113	399.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.21	3.00e-57	214.00
IUUC-Spo-108131	Schizosaccharomyces pombe	40.52	3.00e-57	214.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	36.15	2.00e-46	179.00
IUUC-Smo-109004	Selaginella moellendorffii	48.12	5.00e-80	290.00
IUUC-Sit-110508	Setaria italica	50.17	1.00e-87	315.00
IUUC-Sly-111093	Solanum lycopersicum	48.64	1.00e-80	292.00
IUUC-Stu-112380	Solanum tuberosum	48.64	2.00e-80	291.00
IUUC-Sar-113127	Sorex araneus	88.97	9.00e-73	266.00
IUUC-Sbi-114461	Sorghum bicolor	49.15	5.00e-86	310.00
IUUC-Sre-115020	Sporisorium reilianum	38.76	6.00e-42	165.00
IUUC-Ssc-115632	Sus scrofa	96.14	7.00e-179	619.00
IUUC-Tru-118039	Takifugu rubripes	70.92	8.00e-128	449.00
IUUC-Tsy-119239	Tarsius syrichta	98.22	7.00e-96	343.00
IUUC-Tni-120097	Tetraodon nigroviridis	68.65	6.00e-125	440.00
IUUC-Tca-121695	Theobroma cacao	51.70	5.00e-92	330.00
IUUC-Tre-122182	Trichoderma reesei	37.13	3.00e-49	189.00
IUUC-Tvi-122429	Trichoderma virens	37.04	3.00e-52	198.00
IUUC-Tae-125136	Triticum aestivum	50.85	4.00e-89	320.00
IUUC-Tur-126216	Triticum urartu	50.85	2.00e-89	322.00
IUUC-Tme-127030	Tuber melanosporum	43.38	2.00e-62	231.00
IUUC-Tbe-127686	Tupaia belangeri	94.18	6.00e-103	367.00
IUUC-Ttr-128770	Tursiops truncatus	94.92	9.00e-179	618.00
IUUC-Uma-129446	Ustilago maydis	35.05	2.00e-37	150.00
IUUC-Vda-129680	Verticillium dahliae	39.34	4.00e-42	164.00
IUUC-Vvi-131292	Vitis vinifera	51.88	7.00e-91	327.00
IUUC-Xtr-132204	Xenopus tropicalis	75.16	7.00e-146	509.00
IUUC-Xma-133727	Xiphophorus maculatus	73.40	3.00e-130	457.00
IUUC-Zma-135908	Zea mays	49.15	2.00e-80	292.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence