iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-098373

Ensembl Protein ID

ENSPPYP00000022740.2

UniProt Accession

H2PVJ1; H2PVJ1_PONAB

Genbank Protein ID

ENSPPYP00000022740

Protein Name

WD repeat-containing protein 13

Genbank Nucleotide ID

ABGA01394125

Gene Name

WDR13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000020315.2	ENSPPYT00000023702.2	ENSPPYP00000022740.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-18	65.3	294	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHt +v+++a+  s+++lvs s D t+++W   +g++++
   Q: 294  GHTRGVSDFAWslSNDILVSTSLDATMRIWASEDGRCIR 332
           8***********987********************9987 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MSLNAPARLP RPGKDAYRFA LGSAALSDSR QPSCLEPEKG KRDRRNRRQW SQGRSGGPQE 60
PEAAPEAAAG GHARGGGRGM AAVWQQVLAV DARYNAYRTP TFPQFRTQYI RRRSQLLREN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAGTGCTG GGATTACAGG CGTGAGCCAC CGCGCCCGGC CCTACACCAG TTTTAAAAGT 60
CGTGTTTCTT CTCTTTTTTA TAATGTTGTA CTTCTGATTT CTAGGGAATG ATTCGCAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005886--C:plasma membrane
GO:1990841--F:promoter-specific chromatin binding
GO:1904691--P:negative regulation of type B pancreatic cell proliferation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001029	Aegilops tauschii	33.88	2.00e-26	112.00
IUUC-Aml-001761	Ailuropoda melanoleuca	95.67	0.00e+00	870.00
IUUC-Atr-002577	Amborella trichopoda	38.23	7.00e-58	218.00
IUUC-Aca-004423	Anolis carolinensis	85.15	0.00e+00	834.00
IUUC-Aly-005453	Arabidopsis lyrata	37.73	3.00e-55	209.00
IUUC-Ath-007256	Arabidopsis thaliana	37.73	1.00e-54	207.00
IUUC-Ame-010600	Astyanax mexicanus	77.73	0.00e+00	685.00
IUUC-Bta-013511	Bos taurus	95.67	0.00e+00	871.00
IUUC-Bdi-014322	Brachypodium distachyon	37.92	1.00e-52	200.00
IUUC-Bol-015992	Brassica oleracea	38.04	7.00e-56	211.00
IUUC-Bra-017399	Brassica rapa	37.43	5.00e-56	211.00
IUUC-Cja-019508	Callithrix jacchus	95.46	0.00e+00	870.00
IUUC-Cfa-020273	Canis familiaris	94.85	0.00e+00	862.00
IUUC-Cpo-022002	Cavia porcellus	95.05	0.00e+00	869.00
IUUC-Csa-023862	Chlorocebus sabaeus	95.57	0.00e+00	922.00
IUUC-Cin-025687	Ciona intestinalis	54.10	2.00e-145	508.00
IUUC-Csv-025992	Ciona savignyi	55.08	4.00e-148	517.00
IUUC-Dre-028697	Danio rerio	78.35	0.00e+00	694.00
IUUC-Dno-029208	Dasypus novemcinctus	95.26	0.00e+00	867.00
IUUC-Dor-030316	Dipodomys ordii	94.23	9.00e-103	367.00
IUUC-Eca-033362	Equus caballus	94.81	0.00e+00	743.00
IUUC-Eeu-034599	Erinaceus europaeus	79.35	5.00e-128	451.00
IUUC-Fca-035874	Felis catus	95.46	0.00e+00	868.00
IUUC-Gmo-039176	Gadus morhua	76.75	0.00e+00	693.00
IUUC-Gga-040458	Gallus gallus	77.86	6.00e-62	229.00
IUUC-Gac-041802	Gasterosteus aculeatus	77.73	0.00e+00	716.00
IUUC-Gma-043284	Glycine max	36.89	1.00e-53	204.00
IUUC-Ggo-045546	Gorilla gorilla	95.46	0.00e+00	869.00
IUUC-Hsa-046407	Homo sapiens	95.46	0.00e+00	869.00
IUUC-Hvu-047726	Hordeum vulgare	35.23	1.00e-48	186.00
IUUC-Itr-048939	Ictidomys tridecemlineatus	95.67	0.00e+00	871.00
IUUC-Lpe-051374	Leersia perrieri	39.08	4.00e-55	209.00
IUUC-Loc-052403	Lepisosteus oculatus	72.16	0.00e+00	673.00
IUUC-Laf-053721	Loxodonta africana	95.46	0.00e+00	870.00
IUUC-Mcc-055449	Macaca mulatta	95.57	0.00e+00	922.00
IUUC-Meu-056487	Macropus eugenii	88.45	0.00e+00	853.00
IUUC-Mtr-058659	Medicago truncatula	33.24	4.00e-48	186.00
IUUC-Mmr-061406	Microcebus murinus	94.15	0.00e+00	724.00
IUUC-Mdo-062331	Monodelphis domestica	88.56	0.00e+00	816.00
IUUC-Mmu-064001	Mus musculus	95.05	0.00e+00	865.00
IUUC-Mac-064934	Musa acuminata	37.00	9.00e-54	204.00
IUUC-Mpu-065871	Mustela putorius furo	95.46	0.00e+00	870.00
IUUC-Mlu-067463	Myotis lucifugus	94.02	0.00e+00	845.00
IUUC-Nle-070136	Nomascus leucogenys	95.74	0.00e+00	961.00
IUUC-Opr-070913	Ochotona princeps	86.80	0.00e+00	763.00
IUUC-Ont-071347	Oreochromis niloticus	77.11	0.00e+00	750.00
IUUC-Oan-073527	Ornithorhynchus anatinus	79.23	3.00e-174	604.00
IUUC-Ocu-074829	Oryctolagus cuniculus	90.78	0.00e+00	813.00
IUUC-Oba-075666	Oryza barthii	38.77	8.00e-55	207.00
IUUC-Obr-076413	Oryza brachyantha	38.72	2.00e-54	206.00
IUUC-Ogl-076998	Oryza glaberrima	38.77	6.00e-55	207.00
IUUC-Ogu-078287	Oryza glumaepatula	39.08	2.00e-55	209.00
IUUC-Oin-079359	Oryza indica	38.77	1.00e-54	207.00
IUUC-Olo-080438	Oryza longistaminata	36.56	4.00e-29	122.00
IUUC-Ome-081328	Oryza meridionalis	39.08	6.00e-59	221.00
IUUC-Oni-082574	Oryza nivara	38.77	8.00e-55	207.00
IUUC-Opu-083376	Oryza punctata	35.84	1.00e-48	187.00
IUUC-Oru-085162	Oryza rufipogon	38.77	1.00e-54	207.00
IUUC-Osa-085507	Oryza sativa	38.77	1.00e-54	207.00
IUUC-Ola-087387	Oryzias latipes	75.46	0.00e+00	713.00
IUUC-Oga-088694	Otolemur garnettii	95.46	0.00e+00	868.00
IUUC-Oar-090355	Ovis aries	94.43	0.00e+00	851.00
IUUC-Ptr-091488	Pan troglodytes	92.39	0.00e+00	635.00
IUUC-Pan-092516	Papio anubis	95.74	0.00e+00	925.00
IUUC-Pma-094572	Petromyzon marinus	76.02	0.00e+00	725.00
IUUC-Ppa-096003	Physcomitrella patens	37.95	3.00e-42	166.00
IUUC-Pfo-096819	Poecilia formosa	73.93	0.00e+00	700.00
IUUC-Pop-099930	Populus trichocarpa	39.33	4.00e-57	215.00
IUUC-Pca-100248	Procavia capensis	91.96	0.00e+00	847.00
IUUC-Ppe-101592	Prunus persica	37.20	8.00e-52	197.00
IUUC-Pva-102971	Pteropus vampyrus	95.46	0.00e+00	868.00
IUUC-Rno-105386	Rattus norvegicus	92.88	0.00e+00	714.00
IUUC-Sha-106520	Sarcophilus harrisii	85.98	0.00e+00	835.00
IUUC-Smo-108859	Selaginella moellendorffii	41.19	6.00e-59	221.00
IUUC-Sit-109987	Setaria italica	37.80	1.00e-53	203.00
IUUC-Sly-111433	Solanum lycopersicum	35.91	2.00e-51	196.00
IUUC-Stu-112677	Solanum tuberosum	35.46	1.00e-54	207.00
IUUC-Sar-113317	Sorex araneus	97.83	5.00e-147	514.00
IUUC-Sbi-114115	Sorghum bicolor	37.20	1.00e-21	96.70
IUUC-Ssc-115697	Sus scrofa	100.00	4.00e-137	479.00
IUUC-Tru-118749	Takifugu rubripes	77.00	0.00e+00	711.00
IUUC-Tni-119685	Tetraodon nigroviridis	73.27	0.00e+00	656.00
IUUC-Tca-121769	Theobroma cacao	37.08	1.00e-53	204.00
IUUC-Tae-125563	Triticum aestivum	34.42	6.00e-33	134.00
IUUC-Tur-126403	Triticum urartu	33.06	5.00e-25	108.00
IUUC-Tbe-127245	Tupaia belangeri	94.24	2.00e-120	425.00
IUUC-Ttr-128854	Tursiops truncatus	95.88	0.00e+00	890.00
IUUC-Vvi-131113	Vitis vinifera	36.89	3.00e-53	202.00
IUUC-Xtr-132420	Xenopus tropicalis	77.62	0.00e+00	694.00
IUUC-Xma-134302	Xiphophorus maculatus	76.91	0.00e+00	744.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence