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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007325
UUCD1 version UUC-ArT-00130
Ensembl Protein ID AT1G72175.1
UniProt Accession Q93WJ5; Q93WJ5_ARATH
Genbank Protein ID AAK44172.1; AAL15193.1; AAM61248.1; AEE35285.1
Protein Name E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232); Putative uncharacterized protein; Putative uncharacterized protein At1g72175
Genbank Nucleotide ID AF370357; AY059087; AY084686; CP002684
Gene Name At1g72175
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G72175 AT1G72175.1 AT1G72175.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 35.47 2.00e-23 106.00 IUUC-Hsa-046691
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MNSPPENDLC SICHSHFTAP CQANCSHWFC GNCIMLVWRH GSTLQPCKCP LCRRHISLLV 60
PSEDTIRDRN DATVKEVLGN LETYNRLFGG RSSSLVQRMQ DLPFLLRRLL REMMDPQRTL 120
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Protein Fasta Sequence


>IUUC-Ath-007325|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCGATGGACC GCCATAGTCA CCGACTAAAA AAACCAGCGA CCACGTAAAT CTTTGACGAC 60
GAGGAGGAGG AGGAGGAGAA GAATAAACGG AAGAAACTAA GAGATGAATA GTCCACCGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007325|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR010652--DUF1232
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF06803--DUF1232
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000837 Aegilops tauschii 44.00 1.00e-30 125.00
IUUC-Aml-002276 Ailuropoda melanoleuca 35.92 3.00e-20 91.30
IUUC-Atr-003163 Amborella trichopoda 62.30 1.00e-60 224.00
IUUC-Apl-003771 Anas platyrhynchos 37.14 5.00e-18 84.00
IUUC-Aca-004706 Anolis carolinensis 36.05 6.00e-18 83.60
IUUC-Aly-006202 Arabidopsis lyrata 95.14 7.00e-77 278.00
IUUC-Ame-011453 Astyanax mexicanus 36.11 9.00e-24 103.00
IUUC-Bta-013272 Bos taurus 37.32 6.00e-21 93.60
IUUC-Bdi-014259 Brachypodium distachyon 60.77 2.00e-57 214.00
IUUC-Bol-016302 Brassica oleracea 91.89 1.00e-84 304.00
IUUC-Bra-017738 Brassica rapa 92.97 4.00e-85 306.00
IUUC-Cja-019253 Callithrix jacchus 36.43 8.00e-20 89.70
IUUC-Cfa-020844 Canis familiaris 37.32 4.00e-20 92.40
IUUC-Cpo-021645 Cavia porcellus 35.71 6.00e-20 90.50
IUUC-Csa-024012 Chlorocebus sabaeus 36.62 4.00e-20 90.90
IUUC-Cin-025256 Ciona intestinalis 37.79 5.00e-19 87.40
IUUC-Dre-028166 Danio rerio 36.07 9.00e-22 96.30
IUUC-Dno-029494 Dasypus novemcinctus 36.43 3.00e-20 91.30
IUUC-Dor-030259 Dipodomys ordii 36.88 1.00e-19 89.40
IUUC-Ete-032614 Echinops telfairi 28.57 2.00e-09 55.50
IUUC-Eca-033557 Equus caballus 37.32 6.00e-21 93.60
IUUC-Eeu-035324 Erinaceus europaeus 37.04 1.50e-01 29.60
IUUC-Fca-035812 Felis catus 37.32 7.00e-21 93.60
IUUC-Fal-036654 Ficedula albicollis 35.71 5.00e-22 97.80
IUUC-Gmo-039635 Gadus morhua 34.25 1.00e-21 95.90
IUUC-Gga-040345 Gallus gallus 38.73 2.00e-22 98.20
IUUC-Gac-041668 Gasterosteus aculeatus 35.56 3.00e-22 98.20
IUUC-Gma-043890 Glycine max 67.93 2.00e-59 220.00
IUUC-Ggo-045000 Gorilla gorilla 36.62 4.00e-20 90.90
IUUC-Hsa-046691 Homo sapiens 36.62 4.00e-20 90.90
IUUC-Hvu-047464 Hordeum vulgare 59.78 2.00e-55 207.00
IUUC-Itr-048988 Ictidomys tridecemlineatus 37.32 5.00e-21 94.00
IUUC-Lch-049846 Latimeria chalumnae 36.26 3.00e-19 87.00
IUUC-Loc-051785 Lepisosteus oculatus 35.56 3.00e-25 108.00
IUUC-Laf-054542 Loxodonta africana 36.62 2.00e-20 91.70
IUUC-Mcc-055234 Macaca mulatta 36.62 4.00e-20 90.90
IUUC-Meu-056544 Macropus eugenii 27.12 2.00e-04 38.90
IUUC-Mtr-057996 Medicago truncatula 65.22 9.00e-50 188.00
IUUC-Mmr-060609 Microcebus murinus 38.03 4.00e-21 94.40
IUUC-Mdo-062853 Monodelphis domestica 37.86 2.00e-22 99.00
IUUC-Mmu-064383 Mus musculus 36.73 4.00e-20 91.30
IUUC-Mac-065250 Musa acuminata 66.49 2.00e-63 233.00
IUUC-Mlu-067410 Myotis lucifugus 37.32 1.00e-21 96.30
IUUC-Nle-069537 Nomascus leucogenys 35.71 3.00e-20 90.50
IUUC-Opr-070637 Ochotona princeps 35.29 7.00e-13 67.40
IUUC-Ont-071800 Oreochromis niloticus 34.81 1.00e-22 99.40
IUUC-Oan-073190 Ornithorhynchus anatinus 35.71 4.00e-21 94.40
IUUC-Ocu-073899 Oryctolagus cuniculus 37.41 7.00e-21 93.20
IUUC-Obr-076075 Oryza brachyantha 59.65 5.00e-51 192.00
IUUC-Oin-079850 Oryza indica 59.67 2.00e-53 201.00
IUUC-Ome-081191 Oryza meridionalis 61.33 2.00e-54 204.00
IUUC-Oni-082886 Oryza nivara 60.22 1.00e-53 201.00
IUUC-Osa-085833 Oryza sativa 60.22 8.00e-54 202.00
IUUC-Ola-086372 Oryzias latipes 34.81 8.00e-23 99.80
IUUC-Oga-087988 Otolemur garnettii 36.62 6.00e-20 90.50
IUUC-Oar-089976 Ovis aries 37.32 7.00e-21 93.60
IUUC-Ptr-091377 Pan troglodytes 36.62 4.00e-20 90.90
IUUC-Pan-092348 Papio anubis 36.43 3.00e-20 91.30
IUUC-Psi-092982 Pelodiscus sinensis 35.71 6.00e-20 90.50
IUUC-Ppa-095627 Physcomitrella patens 55.14 6.00e-48 183.00
IUUC-Pfo-096366 Poecilia formosa 33.70 3.00e-22 98.20
IUUC-Pab-098242 Pongo abelii 36.43 5.00e-20 90.50
IUUC-Pop-099776 Populus trichocarpa 75.68 5.00e-71 259.00
IUUC-Ppe-101586 Prunus persica 53.68 2.00e-32 130.00
IUUC-Pva-102627 Pteropus vampyrus 36.99 7.00e-21 94.00
IUUC-Pte-104279 Pyrenophora teres 37.93 2.00e-05 44.30
IUUC-Rno-105344 Rattus norvegicus 34.66 2.00e-20 92.00
IUUC-Sha-107420 Sarcophilus harrisii 37.86 3.00e-22 97.80
IUUC-Smo-109218 Selaginella moellendorffii 49.46 3.00e-41 160.00
IUUC-Stu-112127 Solanum tuberosum 68.65 2.00e-63 234.00
IUUC-Sar-113762 Sorex araneus 38.46 4.00e-21 94.40
IUUC-Sbi-113997 Sorghum bicolor 58.24 8.00e-52 195.00
IUUC-Tgu-116969 Taeniopygia guttata 35.71 2.00e-22 98.60
IUUC-Tru-118414 Takifugu rubripes 34.43 3.00e-20 91.30
IUUC-Tsy-119312 Tarsius syrichta 36.43 4.00e-20 90.90
IUUC-Tni-120687 Tetraodon nigroviridis 34.86 6.00e-22 97.10
IUUC-Tca-121028 Theobroma cacao 73.51 5.00e-65 239.00
IUUC-Tae-124956 Triticum aestivum 60.22 5.00e-57 213.00
IUUC-Tur-126558 Triticum urartu 57.79 5.00e-42 162.00
IUUC-Tbe-127751 Tupaia belangeri 28.17 2.00e-08 52.40
IUUC-Ttr-128731 Tursiops truncatus 31.36 2.00e-15 75.90
IUUC-Vpa-130187 Vicugna pacos 37.32 1.00e-20 92.80
IUUC-Vvi-131393 Vitis vinifera 68.85 1.00e-57 214.00
IUUC-Xtr-132512 Xenopus tropicalis 36.99 9.00e-23 99.80
IUUC-Xma-133203 Xiphophorus maculatus 33.70 3.00e-22 97.80
Created Date 25-Jun-2017

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