iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mlu-066974

Ensembl Protein ID

ENSMLUP00000000216.2

UniProt Accession

G1NSU6; G1NSU6_MYOLU

Genbank Protein ID

ENSMLUP00000000216

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02021246

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000000235.2	ENSMLUT00000000234.2	ENSMLUP00000000216.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.20e-08	34.1	266	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 266  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 303
           78999*******************************97 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

LLPATGAWLV RTSRYLSDEG IEACTSSPDK VNLNDIILIA LNLEGPCVLQ IQKIRNVAAP 60
KDNEESQAAP RMLRLQMTDG HISCTAVEYS YMSKISLNTP PGTKVKLSGI VDVKNGFLLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTATTGCCTG CAACAGGTGC ATGGTTGGTT CGGACTAGAT AAAAGAACAA AGGGCAATAA 60
GACAATGAGT AAAACAACTG AAAAGAGACA GGGAAAGTAA AAGATATAAG GTAAAAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033472--DUF1767
IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM01161--DUF1767
SM00333--TUDOR
SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	34.13	1.00e-15	77.40
IUUC-Aml-001751	Ailuropoda melanoleuca	90.35	0.00e+00	1191.00
IUUC-Atr-002788	Amborella trichopoda	32.81	5.00e-16	79.00
IUUC-Apl-004055	Anas platyrhynchos	76.29	0.00e+00	910.00
IUUC-Aca-004367	Anolis carolinensis	69.48	0.00e+00	920.00
IUUC-Aly-006072	Arabidopsis lyrata	37.10	8.00e-19	88.20
IUUC-Ath-007491	Arabidopsis thaliana	36.29	3.00e-18	86.70
IUUC-Ame-011439	Astyanax mexicanus	46.60	7.00e-134	471.00
IUUC-Bta-012894	Bos taurus	89.91	0.00e+00	1209.00
IUUC-Bdi-014462	Brachypodium distachyon	33.07	4.00e-16	79.30
IUUC-Bol-015343	Brassica oleracea	39.53	2.00e-19	90.10
IUUC-Bra-016787	Brassica rapa	38.76	2.00e-19	89.70
IUUC-Cel-018154	Caenorhabditis elegans	33.47	2.00e-25	110.00
IUUC-Cja-019364	Callithrix jacchus	90.38	0.00e+00	1078.00
IUUC-Cfa-021166	Canis familiaris	88.24	0.00e+00	1152.00
IUUC-Cpo-021678	Cavia porcellus	81.40	0.00e+00	969.00
IUUC-Csa-023299	Chlorocebus sabaeus	86.00	0.00e+00	1207.00
IUUC-Cho-024694	Choloepus hoffmanni	94.08	1.00e-136	479.00
IUUC-Cin-025191	Ciona intestinalis	37.50	3.00e-35	141.00
IUUC-Csv-026348	Ciona savignyi	52.94	2.00e-12	63.50
IUUC-Dre-028715	Danio rerio	46.84	6.00e-138	484.00
IUUC-Dno-030091	Dasypus novemcinctus	85.82	0.00e+00	1188.00
IUUC-Dor-030807	Dipodomys ordii	76.35	0.00e+00	885.00
IUUC-Dme-031770	Drosophila melanogaster	30.67	2.00e-35	144.00
IUUC-Ete-032507	Echinops telfairi	68.13	0.00e+00	691.00
IUUC-Eca-033406	Equus caballus	91.78	0.00e+00	1044.00
IUUC-Eeu-034600	Erinaceus europaeus	80.42	0.00e+00	904.00
IUUC-Fca-035916	Felis catus	90.03	0.00e+00	1187.00
IUUC-Fal-036658	Ficedula albicollis	72.74	0.00e+00	912.00
IUUC-Gmo-038974	Gadus morhua	51.95	3.00e-89	322.00
IUUC-Gga-040195	Gallus gallus	72.10	0.00e+00	976.00
IUUC-Gac-042537	Gasterosteus aculeatus	42.97	3.00e-130	459.00
IUUC-Gma-044234	Glycine max	41.54	4.00e-22	99.00
IUUC-Ggo-044715	Gorilla gorilla	88.29	0.00e+00	1103.00
IUUC-Hsa-045814	Homo sapiens	86.63	0.00e+00	1219.00
IUUC-Hvu-047365	Hordeum vulgare	29.58	5.00e-15	75.50
IUUC-Itr-047866	Ictidomys tridecemlineatus	87.43	0.00e+00	1182.00
IUUC-Lch-050393	Latimeria chalumnae	59.35	0.00e+00	714.00
IUUC-Lpe-050691	Leersia perrieri	33.86	6.00e-17	82.00
IUUC-Loc-052859	Lepisosteus oculatus	55.79	3.00e-176	612.00
IUUC-Laf-053953	Loxodonta africana	87.18	0.00e+00	776.00
IUUC-Mcc-055846	Macaca mulatta	86.17	0.00e+00	1205.00
IUUC-Meu-056790	Macropus eugenii	69.87	0.00e+00	804.00
IUUC-Mtr-058749	Medicago truncatula	41.41	1.00e-17	84.00
IUUC-Mla-058959	Melampsora laricipopulina	41.18	1.00e-06	47.40
IUUC-Mga-059656	Meleagris gallopavo	71.43	0.00e+00	897.00
IUUC-Mmr-061089	Microcebus murinus	87.61	0.00e+00	1189.00
IUUC-Mdo-063043	Monodelphis domestica	69.52	0.00e+00	768.00
IUUC-Mmu-063654	Mus musculus	79.80	0.00e+00	1046.00
IUUC-Mac-064947	Musa acuminata	36.05	4.00e-14	72.40
IUUC-Mpu-066115	Mustela putorius furo	92.82	0.00e+00	1061.00
IUUC-Nle-069184	Nomascus leucogenys	86.00	0.00e+00	1205.00
IUUC-Opr-070770	Ochotona princeps	78.47	0.00e+00	946.00
IUUC-Ont-072040	Oreochromis niloticus	56.26	5.00e-124	438.00
IUUC-Oan-073448	Ornithorhynchus anatinus	85.19	7.00e-71	259.00
IUUC-Ocu-074405	Oryctolagus cuniculus	86.16	0.00e+00	1161.00
IUUC-Oba-075977	Oryza barthii	31.50	1.00e-10	60.50
IUUC-Obr-076298	Oryza brachyantha	33.07	4.00e-16	79.30
IUUC-Ogl-077706	Oryza glaberrima	32.28	1.00e-10	61.20
IUUC-Ogu-078381	Oryza glumaepatula	32.06	2.00e-11	63.50
IUUC-Oin-080150	Oryza indica	32.82	5.00e-11	62.40
IUUC-Ome-081153	Oryza meridionalis	32.06	2.00e-10	60.50
IUUC-Oni-083115	Oryza nivara	32.06	9.00e-11	61.20
IUUC-Opu-083860	Oryza punctata	31.30	7.00e-15	75.10
IUUC-Oru-084859	Oryza rufipogon	32.82	6.00e-11	62.00
IUUC-Osa-085567	Oryza sativa	32.82	1.00e-09	57.80
IUUC-Ola-087049	Oryzias latipes	43.61	4.00e-138	485.00
IUUC-Oga-088455	Otolemur garnettii	86.45	0.00e+00	1187.00
IUUC-Oar-090096	Ovis aries	88.02	0.00e+00	1192.00
IUUC-Ptr-090974	Pan troglodytes	89.07	0.00e+00	1118.00
IUUC-Pan-092657	Papio anubis	85.57	0.00e+00	1204.00
IUUC-Psi-093113	Pelodiscus sinensis	76.39	0.00e+00	917.00
IUUC-Ppa-095466	Physcomitrella patens	40.98	3.00e-20	93.20
IUUC-Pfo-096631	Poecilia formosa	44.89	9.00e-141	494.00
IUUC-Pab-098070	Pongo abelii	86.71	0.00e+00	1218.00
IUUC-Pop-099235	Populus trichocarpa	34.92	1.00e-17	84.70
IUUC-Pca-101032	Procavia capensis	80.91	0.00e+00	985.00
IUUC-Ppe-101793	Prunus persica	37.50	6.00e-20	91.70
IUUC-Pva-102290	Pteropus vampyrus	90.70	0.00e+00	1090.00
IUUC-Rno-105080	Rattus norvegicus	81.73	0.00e+00	911.00
IUUC-Sha-107598	Sarcophilus harrisii	76.40	0.00e+00	1003.00
IUUC-Sit-110735	Setaria italica	32.06	1.00e-15	77.80
IUUC-Sly-111126	Solanum lycopersicum	39.53	2.00e-16	80.50
IUUC-Stu-112780	Solanum tuberosum	38.58	3.00e-20	92.80
IUUC-Sar-113418	Sorex araneus	88.60	0.00e+00	1034.00
IUUC-Sbi-113925	Sorghum bicolor	32.06	3.00e-15	76.30
IUUC-Sre-114917	Sporisorium reilianum	36.14	1.00e-06	47.80
IUUC-Ssc-115712	Sus scrofa	88.49	0.00e+00	1206.00
IUUC-Tgu-117148	Taeniopygia guttata	72.39	0.00e+00	949.00
IUUC-Tru-117831	Takifugu rubripes	43.91	3.00e-138	485.00
IUUC-Tsy-118917	Tarsius syrichta	87.60	0.00e+00	1019.00
IUUC-Tni-120783	Tetraodon nigroviridis	43.40	9.00e-137	481.00
IUUC-Tca-121430	Theobroma cacao	42.19	6.00e-06	45.40
IUUC-Tae-123752	Triticum aestivum	34.13	1.00e-15	77.40
IUUC-Tur-126238	Triticum urartu	34.38	8.00e-15	74.70
IUUC-Ttr-128615	Tursiops truncatus	85.64	0.00e+00	1006.00
IUUC-Vpa-130531	Vicugna pacos	92.50	0.00e+00	1115.00
IUUC-Vvi-131607	Vitis vinifera	38.28	1.00e-13	71.20
IUUC-Xtr-132787	Xenopus tropicalis	58.75	0.00e+00	690.00
IUUC-Xma-133815	Xiphophorus maculatus	43.72	2.00e-138	486.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence