iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017815

Ensembl Protein ID

Bra002084.1-P

UniProt Accession

M4CD03; M4CD03_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra002084	Bra002084.1	Bra002084.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-06	27.8	194	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C H+fh+ C+ kw        ++ +CP Cr
   Q: 194  CSVCLQDFqlgET-VRSLPhCHHMFHLPCIDKW------LLRHGSCPMCR 236
           ********88555.*******************......999999****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASYYRFQSG FCPLSPCPSL LLGNFVERIK DACHFLVSAV LGTIISAVLT FFFSLVGTLL 60
GALTGALIGQ ETESGFIRGA AIGAITGAVF SIEVFESSLD LWKSDESCFG CLLYLIDVIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTT ATTACAGATT CCAATCTGGG TTTTGTCCTC TCTCGCCTTG TCCCTCTCTT 60
CTTCTTGGAA ACTTCGTCGA ACGGATCAAA GACGCTTGTC ATTTCCTCGT CTCCGCTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR027367--Gly-zipper_YMGG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13441--Gly-zipper_YMGG
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005702	Arabidopsis lyrata	89.92	3.00e-99	353.00
IUUC-Ath-006697	Arabidopsis thaliana	91.75	6.00e-85	306.00
IUUC-Bol-015847	Brassica oleracea	99.16	2.00e-120	424.00
IUUC-Eca-033955	Equus caballus	45.31	4.00e-13	68.90
IUUC-Hvu-047681	Hordeum vulgare	50.96	3.00e-51	194.00
IUUC-Lpe-050990	Leersia perrieri	49.48	2.00e-51	195.00
IUUC-Mac-064778	Musa acuminata	59.50	6.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence