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Tag Content
iUUCD ID IUUC-Ggo-045286
Ensembl Protein ID ENSGGOP00000000864.2
UniProt Accession P0CG67; Q867C2; Q867C6; UBB_GORGO
Genbank Protein ID BAC56958.1
Protein Name Polyubiquitin-B; Ubiquitin
Genbank Nucleotide ID AB089620
Gene Name UBB
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGGOG00000000879.2 ENSGGOT00000000883.2 ENSGGOP00000000864.2
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 2.70e-124 406.1 153 228
ULD/UDP/UBQ/UBQ_PIM 5.00e-90 295.9 153 225
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
    m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
    89*************************************************************************9 PP
   


   ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
    m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++
   Q: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
    99********************************************************************986 PP
   

Organism Gorilla gorilla
Functional Description
(View)

Functional Description



     Ubiquitin: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling.
Ubiquitin: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling.
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVEPSDTIE NVKAKIQDKE GIPPDQQRLI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ggo-045286|ULD,NEDD8;ULD,UBQ_PIM|Gorilla gorilla
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACTCGTTGC ATAAATTTGC GCTCCGCCAG CCCGGAGCAT TTCGGGGTGG TTGGCTTTGT 60
TGGTTGAGCT TGTTTGTGTT CCTGTGAGTG GACGTGTTTG GTGATTCGCA GGCTCCTGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ggo-045286|ULD,NEDD8;ULD,UBQ_PIM|Gorilla gorilla
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0832--Ubl conjugation

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0043209--C:myelin sheath
GO:0005634--C:nucleus
GO:0097009--P:energy homeostasis
GO:0060613--P:fat pad development
GO:0008585--P:female gonad development
GO:0007144--P:female meiosis I
GO:0021888--P:hypothalamus gonadotrophin-releasing hormone neuron development
GO:0007141--P:male meiosis I
GO:0072520--P:seminiferous tubule development
GO:0010992--P:ubiquitin homeostasis

KEGG ggo:101144449
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000772 Aegilops tauschii 47.35 1.00e-47 185.00
IUUC-Aml-001483 Ailuropoda melanoleuca 100.00 3.00e-130 456.00
IUUC-Bdi-014399 Brachypodium distachyon 96.05 1.00e-124 438.00
IUUC-Bra-017586 Brassica rapa 95.63 1.00e-124 438.00
IUUC-Cja-019680 Callithrix jacchus 100.00 3.00e-130 456.00
IUUC-Cfa-021247 Canis familiaris 99.56 2.00e-129 454.00
IUUC-Cre-022556 Chlamydomonas reinhardtii 97.37 3.00e-82 296.00
IUUC-Csa-024086 Chlorocebus sabaeus 100.00 6.00e-129 452.00
IUUC-Cgl-026543 Colletotrichum gloeosporioides 96.05 2.00e-124 437.00
IUUC-Dor-031044 Dipodomys ordii 100.00 3.00e-76 276.00
IUUC-Dse-031434 Dothistroma septosporum 96.05 2.00e-124 437.00
IUUC-Eca-033850 Equus caballus 100.00 3.00e-130 456.00
IUUC-Fca-036501 Felis catus 100.00 3.00e-130 456.00
IUUC-Fox-037730 Fusarium oxysporum 95.61 5.00e-124 436.00
IUUC-Gga-040636 Gallus gallus 100.00 1.00e-128 452.00
IUUC-Hsa-046862 Homo sapiens 100.00 3.00e-130 456.00
IUUC-Itr-048563 Ictidomys tridecemlineatus 95.60 1.00e-44 170.00
IUUC-Mcc-055509 Macaca mulatta 100.00 3.00e-130 456.00
IUUC-Mga-059240 Meleagris gallopavo 98.14 1.00e-87 315.00
IUUC-Mmr-061259 Microcebus murinus 94.76 1.00e-119 421.00
IUUC-Mdo-062396 Monodelphis domestica 100.00 3.00e-130 456.00
IUUC-Mac-065145 Musa acuminata 86.18 2.00e-69 254.00
IUUC-Nle-069822 Nomascus leucogenys 100.00 3.00e-130 456.00
IUUC-Opr-070947 Ochotona princeps 100.00 6.00e-129 452.00
IUUC-Ocu-074508 Oryctolagus cuniculus 100.00 3.00e-130 456.00
IUUC-Oru-084544 Oryza rufipogon 78.95 5.00e-60 223.00
IUUC-Ola-086841 Oryzias latipes 100.00 6.00e-129 452.00
IUUC-Oga-089171 Otolemur garnettii 100.00 2.00e-85 307.00
IUUC-Oar-089637 Ovis aries 100.00 3.00e-130 456.00
IUUC-Pno-095087 Phaeosphaeria nodorum 96.05 4.00e-124 436.00
IUUC-Pab-098703 Pongo abelii 100.00 3.00e-130 456.00
IUUC-Pva-102696 Pteropus vampyrus 100.00 3.00e-130 456.00
IUUC-Pte-104277 Pyrenophora teres 96.05 2.00e-124 437.00
IUUC-Pyt-104779 Pyrenophora triticirepentis 96.05 2.00e-124 437.00
IUUC-Sha-107155 Sarcophilus harrisii 99.56 1.00e-129 454.00
IUUC-Ssc-115249 Sus scrofa 100.00 3.00e-130 456.00
IUUC-Tsy-119558 Tarsius syrichta 90.20 5.00e-75 272.00
IUUC-Tni-120338 Tetraodon nigroviridis 100.00 3.00e-84 303.00
IUUC-Tae-124009 Triticum aestivum 96.05 2.00e-124 438.00
IUUC-Ttr-128948 Tursiops truncatus 100.00 3.00e-130 456.00
IUUC-Vda-129663 Verticillium dahliae 96.05 2.00e-124 437.00
IUUC-Xtr-132541 Xenopus tropicalis 100.00 3.00e-130 456.00
Created Date 25-Jun-2017

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