iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016918

Ensembl Protein ID

Bra018644.1-P

UniProt Accession

M4DQ53; M4DQ53_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018644	Bra018644.1	Bra018644.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-08	33.9	107	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikv 27
           Ht++v++l+f s+  ++ s+sdDg++ +
   Q: 107  HTAPVNDLSFdSEgEYIGSCSDDGSVVI 134
           **********9889***********987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASLPSENGV DGDDEREEEE EDEEEEEEEE NGEEEGEEEP RLKYQRMGGN VPSLLSNDAA 60
SCIAVAARMI ALGTHDGTVH ILDFLGNQAS FPLNSRFNVL VKEFRAHTAP VNDLSFDSEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGC TCCCGTCTGA AAACGGCGTT GACGGAGATG ACGAAAGGGA GGAGGAGGAG 60
GAAGATGAAG AAGAAGAAGA GGAAGAAGAA AACGGAGAAG AAGAGGGCGA GGAGGAGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR016902--VPS41
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50236--CHCR
PS50082--WD_REPEATS_2

Pfam

PF00637--Clathrin

SMART

SM00299--CLH
SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0009630--P:gravitropism
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	64.41	0.00e+00	1173.00
IUUC-Aml-001435	Ailuropoda melanoleuca	35.43	5.00e-155	541.00
IUUC-Atr-002975	Amborella trichopoda	70.05	0.00e+00	1307.00
IUUC-Apl-003254	Anas platyrhynchos	35.09	4.00e-150	525.00
IUUC-Aca-005067	Anolis carolinensis	34.90	1.00e-150	526.00
IUUC-Aly-005839	Arabidopsis lyrata	90.88	0.00e+00	1734.00
IUUC-Ath-006625	Arabidopsis thaliana	91.10	0.00e+00	1747.00
IUUC-Ago-007960	Ashbya gossypii	23.88	1.00e-66	247.00
IUUC-Acl-008174	Aspergillus clavatus	22.61	4.00e-63	236.00
IUUC-Afl-008524	Aspergillus flavus	23.93	3.00e-43	171.00
IUUC-Afu-009054	Aspergillus fumigatus	23.47	8.00e-45	176.00
IUUC-Ani-009250	Aspergillus nidulans	23.02	9.00e-37	149.00
IUUC-Ang-009665	Aspergillus niger	22.47	1.00e-59	225.00
IUUC-Aor-010230	Aspergillus oryzae	24.04	1.00e-45	178.00
IUUC-Ate-010464	Aspergillus terreus	21.46	5.00e-36	146.00
IUUC-Ame-011311	Astyanax mexicanus	34.49	2.00e-121	430.00
IUUC-Bgr-012099	Blumeria graminis	25.53	2.00e-48	188.00
IUUC-Bta-013327	Bos taurus	35.20	7.00e-154	537.00
IUUC-Bci-013660	Botrytis cinerea	25.47	3.00e-42	167.00
IUUC-Bdi-014641	Brachypodium distachyon	64.52	0.00e+00	1207.00
IUUC-Bol-015685	Brassica oleracea	98.31	0.00e+00	1815.00
IUUC-Cel-018385	Caenorhabditis elegans	24.38	1.00e-72	268.00
IUUC-Cja-018994	Callithrix jacchus	35.67	1.00e-154	540.00
IUUC-Cfa-020405	Canis familiaris	35.54	1.00e-154	540.00
IUUC-Cpo-022163	Cavia porcellus	35.09	2.00e-152	532.00
IUUC-Cre-022626	Chlamydomonas reinhardtii	29.34	7.00e-41	162.00
IUUC-Csa-023134	Chlorocebus sabaeus	35.63	4.00e-156	545.00
IUUC-Cho-024913	Choloepus hoffmanni	35.74	5.00e-98	352.00
IUUC-Cin-025239	Ciona intestinalis	35.15	5.00e-145	508.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	24.96	7.00e-41	162.00
IUUC-Cne-026799	Cryptococcus neoformans	38.65	1.00e-162	566.00
IUUC-Cme-027200	Cyanidioschyzon merolae	27.06	7.00e-10	59.30
IUUC-Dre-028115	Danio rerio	34.24	5.00e-153	535.00
IUUC-Dor-030947	Dipodomys ordii	36.35	1.00e-144	506.00
IUUC-Dse-031544	Dothistroma septosporum	25.80	5.00e-44	173.00
IUUC-Dme-031830	Drosophila melanogaster	30.16	4.00e-103	369.00
IUUC-Ete-033051	Echinops telfairi	33.22	2.00e-41	164.00
IUUC-Eca-033501	Equus caballus	35.43	3.00e-155	541.00
IUUC-Eeu-034555	Erinaceus europaeus	34.25	3.00e-78	286.00
IUUC-Fca-035809	Felis catus	34.43	2.00e-153	536.00
IUUC-Fal-037056	Ficedula albicollis	35.20	6.00e-150	524.00
IUUC-Fox-037949	Fusarium oxysporum	23.76	4.00e-40	160.00
IUUC-Fso-038282	Fusarium solani	23.60	8.00e-38	152.00
IUUC-Gmo-038540	Gadus morhua	34.40	5.00e-145	508.00
IUUC-Ggr-039733	Gaeumannomyces graminis	25.31	7.00e-44	172.00
IUUC-Gga-040446	Gallus gallus	34.94	5.00e-149	521.00
IUUC-Gac-041462	Gasterosteus aculeatus	35.50	1.00e-145	510.00
IUUC-Gma-043148	Glycine max	75.92	0.00e+00	1483.00
IUUC-Hsa-047030	Homo sapiens	35.41	7.00e-156	544.00
IUUC-Hvu-047693	Hordeum vulgare	65.12	0.00e+00	1223.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	35.42	6.00e-155	541.00
IUUC-Kpa-049224	Komagataella pastoris	23.75	1.00e-62	234.00
IUUC-Lch-049444	Latimeria chalumnae	36.48	8.00e-147	513.00
IUUC-Lpe-050942	Leersia perrieri	62.43	0.00e+00	1127.00
IUUC-Loc-052260	Lepisosteus oculatus	34.17	5.00e-151	528.00
IUUC-Lma-053173	Leptosphaeria maculans	22.83	3.00e-39	157.00
IUUC-Laf-054185	Loxodonta africana	35.54	3.00e-155	541.00
IUUC-Mcc-054816	Macaca mulatta	35.41	8.00e-156	544.00
IUUC-Meu-056483	Macropus eugenii	35.53	5.00e-47	182.00
IUUC-Mor-056979	Magnaporthe oryzae	24.50	8.00e-45	176.00
IUUC-Mpo-057312	Magnaporthe poae	25.73	2.00e-43	171.00
IUUC-Mtr-057630	Medicago truncatula	74.18	0.00e+00	1438.00
IUUC-Mla-058930	Melampsora laricipopulina	34.02	6.00e-37	146.00
IUUC-Mga-059942	Meleagris gallopavo	35.16	3.00e-148	518.00
IUUC-Mvi-060386	Microbotryum violaceum	37.46	2.00e-157	550.00
IUUC-Mmr-060640	Microcebus murinus	35.19	2.00e-155	543.00
IUUC-Mdo-062934	Monodelphis domestica	31.70	6.00e-119	421.00
IUUC-Mmu-063488	Mus musculus	35.08	5.00e-155	541.00
IUUC-Mac-064975	Musa acuminata	74.77	0.00e+00	1344.00
IUUC-Mpu-065777	Mustela putorius furo	35.17	5.00e-154	538.00
IUUC-Mlu-068052	Myotis lucifugus	35.54	5.00e-155	541.00
IUUC-Nfi-068436	Neosartorya fischeri	23.23	1.00e-44	175.00
IUUC-Ncr-068840	Neurospora crassa	24.29	3.00e-45	177.00
IUUC-Nle-070063	Nomascus leucogenys	35.19	7.00e-153	534.00
IUUC-Opr-070385	Ochotona princeps	32.48	1.00e-120	427.00
IUUC-Ont-072367	Oreochromis niloticus	35.62	2.00e-145	509.00
IUUC-Oan-073085	Ornithorhynchus anatinus	34.90	5.00e-145	508.00
IUUC-Ocu-074672	Oryctolagus cuniculus	34.86	2.00e-154	539.00
IUUC-Oba-075574	Oryza barthii	66.17	0.00e+00	1247.00
IUUC-Obr-076203	Oryza brachyantha	65.18	0.00e+00	1206.00
IUUC-Ogl-077909	Oryza glaberrima	66.17	0.00e+00	1247.00
IUUC-Ogu-078053	Oryza glumaepatula	65.48	0.00e+00	1240.00
IUUC-Oin-079700	Oryza indica	66.07	0.00e+00	1245.00
IUUC-Olo-080707	Oryza longistaminata	63.53	0.00e+00	1208.00
IUUC-Oni-082754	Oryza nivara	66.03	0.00e+00	1245.00
IUUC-Opu-083854	Oryza punctata	66.14	0.00e+00	1221.00
IUUC-Oru-085071	Oryza rufipogon	65.48	0.00e+00	1240.00
IUUC-Osa-085370	Oryza sativa	66.17	0.00e+00	1247.00
IUUC-Ola-086362	Oryzias latipes	35.20	7.00e-149	521.00
IUUC-Oga-088078	Otolemur garnettii	35.09	3.00e-151	528.00
IUUC-Oar-089679	Ovis aries	35.20	7.00e-154	537.00
IUUC-Ptr-091680	Pan troglodytes	35.41	7.00e-156	544.00
IUUC-Pan-092816	Papio anubis	34.70	1.00e-102	367.00
IUUC-Psi-093890	Pelodiscus sinensis	34.53	9.00e-149	520.00
IUUC-Pma-094654	Petromyzon marinus	36.11	4.00e-164	571.00
IUUC-Pno-095071	Phaeosphaeria nodorum	23.09	2.00e-46	181.00
IUUC-Ppa-095198	Physcomitrella patens	53.24	0.00e+00	955.00
IUUC-Pfo-097465	Poecilia formosa	36.04	3.00e-147	515.00
IUUC-Pab-098686	Pongo abelii	35.41	2.00e-156	545.00
IUUC-Pop-100066	Populus trichocarpa	77.97	0.00e+00	1507.00
IUUC-Pca-100990	Procavia capensis	34.31	1.00e-130	460.00
IUUC-Ppe-101500	Prunus persica	76.67	0.00e+00	1481.00
IUUC-Pva-102809	Pteropus vampyrus	34.86	9.00e-155	540.00
IUUC-Pgr-103404	Puccinia graminis	32.95	2.00e-142	500.00
IUUC-Ptt-103952	Puccinia triticina	31.28	1.00e-135	477.00
IUUC-Pte-104216	Pyrenophora teres	24.26	4.00e-42	167.00
IUUC-Rno-105949	Rattus norvegicus	36.99	3.00e-149	522.00
IUUC-Sce-106462	Saccharomyces cerevisiae	23.70	9.00e-52	198.00
IUUC-Sha-106689	Sarcophilus harrisii	34.17	3.00e-149	522.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	27.72	4.00e-90	325.00
IUUC-Spo-108173	Schizosaccharomyces pombe	29.01	5.00e-106	378.00
IUUC-Smo-109505	Selaginella moellendorffii	54.90	0.00e+00	927.00
IUUC-Sit-110176	Setaria italica	65.96	0.00e+00	1265.00
IUUC-Sly-111840	Solanum lycopersicum	75.21	0.00e+00	1455.00
IUUC-Sar-113073	Sorex araneus	31.95	2.00e-114	406.00
IUUC-Sbi-114139	Sorghum bicolor	66.49	0.00e+00	1248.00
IUUC-Sre-115158	Sporisorium reilianum	34.60	6.00e-147	515.00
IUUC-Ssc-115894	Sus scrofa	35.29	3.00e-155	542.00
IUUC-Tgu-117481	Taeniopygia guttata	35.09	2.00e-150	526.00
IUUC-Tru-118468	Takifugu rubripes	36.19	2.00e-145	509.00
IUUC-Tni-120478	Tetraodon nigroviridis	35.74	1.00e-146	513.00
IUUC-Tca-121780	Theobroma cacao	78.75	0.00e+00	1518.00
IUUC-Tre-121900	Trichoderma reesei	22.76	8.00e-38	152.00
IUUC-Tvi-122343	Trichoderma virens	22.76	1.00e-36	149.00
IUUC-Tae-125764	Triticum aestivum	65.43	0.00e+00	1234.00
IUUC-Tur-126430	Triticum urartu	66.10	0.00e+00	1199.00
IUUC-Tme-127007	Tuber melanosporum	24.32	1.00e-44	175.00
IUUC-Tbe-128073	Tupaia belangeri	35.39	8.00e-129	454.00
IUUC-Ttr-128879	Tursiops truncatus	34.54	2.00e-150	526.00
IUUC-Uma-129356	Ustilago maydis	35.76	5.00e-149	522.00
IUUC-Vda-129676	Verticillium dahliae	23.48	6.00e-38	153.00
IUUC-Vvi-131744	Vitis vinifera	77.72	0.00e+00	1495.00
IUUC-Xtr-132093	Xenopus tropicalis	36.29	5.00e-146	511.00
IUUC-Xma-133199	Xiphophorus maculatus	36.16	2.00e-145	509.00
IUUC-Yli-134385	Yarrowia lipolytica	27.79	5.00e-73	269.00
IUUC-Zma-135567	Zea mays	65.44	0.00e+00	1229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence