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Tag Content
iUUCD ID IUUC-Aly-006296
Ensembl Protein ID fgenesh2_kg.8__1817__AT5G58760.1
UniProt Accession D7MQH2; D7MQH2_ARALL
Genbank Protein ID EFH42549.1
Protein Name Damaged DNA-binding 2
Genbank Nucleotide ID GL348720
Gene Name DDB2; ARALYDRAFT_496001
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__1817__AT5G58760.1 fgenesh2_kg.8__1817__AT5G58760.1 fgenesh2_kg.8__1817__AT5G58760.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.80e-19 67.7 169 200
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDl 30
           H+ +vtcl+f ++  ++l+sG   g+i vWD+
   Q: 169  HSRRVTCLEFhPTknNILLSGDKKGQIGVWDF 200
           999********444699**************5 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MGLTRNKRKT DPEIIIARDT DSELSSSSSS EEEDNYPLSE SEEEDEAVKN GGKIELEKNK 60
AKGKAPITVK LIKKVCKVCK QPGHEAGFKG ATYIDCPMKP CFLCKMPGHT TMSCPHRVVT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006296|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCGAACCCA AAAAGAAACA AAACAGTTTG ATTCGTATTC TCTTCCTTTT TGTCGGGTCG 60
TGAGAATTTT ACCGAAAATG GGTTTAACGA GGAACAAAAG AAAAACGGAC CCAGAAATCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006296|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B
KEGG aly:ARALYDRAFT_496001
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000470 Aegilops tauschii 67.38 0.00e+00 654.00
IUUC-Aml-002203 Ailuropoda melanoleuca 30.49 2.00e-33 135.00
IUUC-Atr-002957 Amborella trichopoda 71.23 0.00e+00 684.00
IUUC-Apl-003832 Anas platyrhynchos 33.53 4.00e-40 158.00
IUUC-Aca-004358 Anolis carolinensis 30.25 2.00e-43 169.00
IUUC-Ath-007115 Arabidopsis thaliana 93.81 0.00e+00 954.00
IUUC-Ame-010817 Astyanax mexicanus 32.82 2.00e-41 162.00
IUUC-Bta-012914 Bos taurus 32.01 1.00e-38 153.00
IUUC-Bdi-014261 Brachypodium distachyon 66.59 0.00e+00 669.00
IUUC-Bol-015317 Brassica oleracea 86.57 0.00e+00 875.00
IUUC-Bra-016848 Brassica rapa 83.93 0.00e+00 855.00
IUUC-Cja-018967 Callithrix jacchus 29.46 7.00e-34 137.00
IUUC-Cfa-021238 Canis familiaris 30.18 1.00e-31 130.00
IUUC-Cpo-022063 Cavia porcellus 30.77 8.00e-34 137.00
IUUC-Csa-023382 Chlorocebus sabaeus 30.06 6.00e-34 137.00
IUUC-Cho-024931 Choloepus hoffmanni 23.50 9.00e-10 58.20
IUUC-Cne-027093 Cryptococcus neoformans 25.12 5.00e-10 58.90
IUUC-Dre-028732 Danio rerio 31.71 3.00e-35 142.00
IUUC-Dor-030461 Dipodomys ordii 33.04 1.00e-28 120.00
IUUC-Ete-033038 Echinops telfairi 30.42 1.00e-32 133.00
IUUC-Eca-033772 Equus caballus 31.00 8.00e-36 144.00
IUUC-Eeu-035234 Erinaceus europaeus 28.29 6.00e-14 71.60
IUUC-Fca-036095 Felis catus 30.25 9.00e-32 130.00
IUUC-Gmo-039683 Gadus morhua 34.36 8.00e-45 173.00
IUUC-Gga-040530 Gallus gallus 33.84 7.00e-41 160.00
IUUC-Gac-041517 Gasterosteus aculeatus 33.03 2.00e-37 149.00
IUUC-Gma-043378 Glycine max 78.60 0.00e+00 766.00
IUUC-Ggo-045364 Gorilla gorilla 30.06 9.00e-35 140.00
IUUC-Hsa-046354 Homo sapiens 30.06 1.00e-34 140.00
IUUC-Hvu-047151 Hordeum vulgare 71.43 5.00e-127 446.00
IUUC-Itr-048304 Ictidomys tridecemlineatus 31.91 7.00e-37 147.00
IUUC-Lpe-051256 Leersia perrieri 62.80 0.00e+00 642.00
IUUC-Loc-052398 Lepisosteus oculatus 31.60 2.00e-39 156.00
IUUC-Laf-053562 Loxodonta africana 31.55 6.00e-36 144.00
IUUC-Mcc-055197 Macaca mulatta 30.10 4.00e-29 121.00
IUUC-Meu-056151 Macropus eugenii 31.36 2.00e-32 131.00
IUUC-Mtr-057940 Medicago truncatula 75.67 0.00e+00 733.00
IUUC-Mga-059923 Meleagris gallopavo 33.63 1.00e-42 166.00
IUUC-Mmr-061465 Microcebus murinus 29.93 8.00e-30 123.00
IUUC-Mdo-063063 Monodelphis domestica 32.53 3.00e-39 155.00
IUUC-Mmu-064294 Mus musculus 31.21 3.00e-36 145.00
IUUC-Mac-065598 Musa acuminata 68.19 0.00e+00 683.00
IUUC-Mpu-066831 Mustela putorius furo 28.96 3.00e-31 129.00
IUUC-Mlu-067222 Myotis lucifugus 31.34 9.00e-34 137.00
IUUC-Nle-069581 Nomascus leucogenys 30.36 4.00e-35 141.00
IUUC-Opr-070644 Ochotona princeps 31.42 6.00e-36 144.00
IUUC-Ont-072605 Oreochromis niloticus 31.46 3.00e-37 148.00
IUUC-Oan-072973 Ornithorhynchus anatinus 33.74 6.00e-41 160.00
IUUC-Ocu-074615 Oryctolagus cuniculus 31.93 3.00e-36 145.00
IUUC-Oba-075283 Oryza barthii 66.97 3.00e-179 620.00
IUUC-Obr-076605 Oryza brachyantha 66.38 0.00e+00 667.00
IUUC-Ogl-077512 Oryza glaberrima 68.04 0.00e+00 637.00
IUUC-Ogu-078329 Oryza glumaepatula 65.95 2.00e-179 621.00
IUUC-Oin-079980 Oryza indica 67.19 3.00e-179 621.00
IUUC-Olo-080516 Oryza longistaminata 67.77 1.00e-176 612.00
IUUC-Ome-081415 Oryza meridionalis 67.42 0.00e+00 634.00
IUUC-Oni-082985 Oryza nivara 67.19 3.00e-179 621.00
IUUC-Opu-084159 Oryza punctata 68.76 0.00e+00 663.00
IUUC-Oru-085137 Oryza rufipogon 67.03 0.00e+00 640.00
IUUC-Osa-085614 Oryza sativa 68.35 0.00e+00 640.00
IUUC-Ola-087044 Oryzias latipes 32.20 4.00e-40 158.00
IUUC-Oga-088274 Otolemur garnettii 30.82 1.00e-35 143.00
IUUC-Oar-089826 Ovis aries 32.01 2.00e-38 152.00
IUUC-Ptr-091631 Pan troglodytes 30.06 1.00e-34 140.00
IUUC-Pan-092535 Papio anubis 30.06 1.00e-34 140.00
IUUC-Psi-093815 Pelodiscus sinensis 32.42 1.00e-37 150.00
IUUC-Pma-094474 Petromyzon marinus 31.82 4.00e-37 147.00
IUUC-Ppa-095414 Physcomitrella patens 59.73 1.00e-170 592.00
IUUC-Pfo-096559 Poecilia formosa 33.75 7.00e-41 160.00
IUUC-Pab-098528 Pongo abelii 30.06 1.00e-34 140.00
IUUC-Pop-100064 Populus trichocarpa 76.34 0.00e+00 779.00
IUUC-Pca-100803 Procavia capensis 31.12 2.00e-35 142.00
IUUC-Ppe-101966 Prunus persica 76.09 0.00e+00 758.00
IUUC-Pva-103213 Pteropus vampyrus 31.12 8.00e-36 144.00
IUUC-Rno-105087 Rattus norvegicus 31.82 1.00e-37 150.00
IUUC-Sha-107466 Sarcophilus harrisii 33.63 1.00e-42 166.00
IUUC-Smo-108958 Selaginella moellendorffii 57.51 2.00e-162 565.00
IUUC-Sit-109968 Setaria italica 66.51 1.00e-179 622.00
IUUC-Sly-111495 Solanum lycopersicum 70.26 0.00e+00 701.00
IUUC-Sar-113272 Sorex araneus 29.48 3.00e-33 135.00
IUUC-Sbi-114706 Sorghum bicolor 63.30 5.00e-168 583.00
IUUC-Ssc-115437 Sus scrofa 32.01 3.00e-33 135.00
IUUC-Tgu-116602 Taeniopygia guttata 33.53 1.00e-40 160.00
IUUC-Tru-118698 Takifugu rubripes 32.30 1.00e-34 140.00
IUUC-Tsy-119027 Tarsius syrichta 29.66 1.00e-26 113.00
IUUC-Tni-119787 Tetraodon nigroviridis 31.68 1.00e-42 166.00
IUUC-Tca-121447 Theobroma cacao 76.18 0.00e+00 744.00
IUUC-Tae-124613 Triticum aestivum 67.66 0.00e+00 670.00
IUUC-Tur-126724 Triticum urartu 67.67 0.00e+00 666.00
IUUC-Tbe-127680 Tupaia belangeri 29.41 3.00e-26 112.00
IUUC-Vvi-131001 Vitis vinifera 75.82 0.00e+00 749.00
IUUC-Xtr-132266 Xenopus tropicalis 33.64 1.00e-42 167.00
IUUC-Xma-133034 Xiphophorus maculatus 31.99 5.00e-37 148.00
Created Date 25-Jun-2017

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