iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cin-025282

Ensembl Protein ID

ENSCINP00000017742.3

UniProt Accession

Q4H3F0; Q4H3F0_CIOIN

Genbank Protein ID

BAE06477.1

Protein Name

Groucho

Genbank Nucleotide ID

AB210472

Gene Name

groucho1; Ci-Groucho1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000008700.3	ENSCINT00000017742.3	ENSCINP00000017742.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-21	75.7	692	729

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHtd+ +c++  +d t l++G+ D+t++ W+l+ g++l
   Q: 692  GHTDGASCIDIsPDgTKLWTGGLDNTVRSWNLTAGKQL 729
           8***********999********************987 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MFPNRPPGPG SAQPFKTSIS EFCDRIKEDF SYLQAHNHSL KMECEKLATE KTETQRQYVM 60
YYEMSYGLNV EMHKQSEIAK RLGIICAQII PLLSQEHQQQ VASAVERAKQ VTMPELNQII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTATTAAT ATTAATCATC AGTAGGTTTT TGTTCATGGA GTAAACAACT GAAGCCAATT 60
AAAAATATAC CAAAAAGAAG TTTCAAGTTA AAGATAGAAT ATGTTTCCAA ATCGGCCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

cin:778634

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002339	Ailuropoda melanoleuca	67.98	8.00e-155	539.00
IUUC-Ame-010724	Astyanax mexicanus	51.86	0.00e+00	692.00
IUUC-Bta-012646	Bos taurus	52.52	0.00e+00	702.00
IUUC-Cja-019079	Callithrix jacchus	52.89	0.00e+00	710.00
IUUC-Cfa-020987	Canis familiaris	52.88	0.00e+00	701.00
IUUC-Cho-024590	Choloepus hoffmanni	49.23	0.00e+00	626.00
IUUC-Csv-026286	Ciona savignyi	85.47	0.00e+00	1221.00
IUUC-Dre-028595	Danio rerio	51.95	0.00e+00	694.00
IUUC-Eca-034397	Equus caballus	52.00	0.00e+00	663.00
IUUC-Fca-036030	Felis catus	52.81	0.00e+00	702.00
IUUC-Fal-037460	Ficedula albicollis	52.88	0.00e+00	700.00
IUUC-Gmo-038805	Gadus morhua	51.39	0.00e+00	681.00
IUUC-Gac-041924	Gasterosteus aculeatus	51.41	0.00e+00	680.00
IUUC-Ggo-045633	Gorilla gorilla	51.95	0.00e+00	700.00
IUUC-Hsa-046461	Homo sapiens	51.75	0.00e+00	702.00
IUUC-Loc-052165	Lepisosteus oculatus	51.53	0.00e+00	684.00
IUUC-Laf-053425	Loxodonta africana	53.11	0.00e+00	707.00
IUUC-Mcc-055766	Macaca mulatta	51.75	0.00e+00	702.00
IUUC-Meu-056209	Macropus eugenii	52.18	0.00e+00	700.00
IUUC-Mdo-061897	Monodelphis domestica	51.39	0.00e+00	677.00
IUUC-Mpu-066410	Mustela putorius furo	51.85	0.00e+00	638.00
IUUC-Opr-070645	Ochotona princeps	51.24	0.00e+00	627.00
IUUC-Ont-071865	Oreochromis niloticus	51.93	0.00e+00	693.00
IUUC-Oar-090347	Ovis aries	51.48	0.00e+00	635.00
IUUC-Pfo-096880	Poecilia formosa	51.93	0.00e+00	683.00
IUUC-Pab-097539	Pongo abelii	50.78	0.00e+00	633.00
IUUC-Sar-113414	Sorex araneus	73.95	4.00e-145	507.00
IUUC-Ssc-116408	Sus scrofa	52.53	0.00e+00	694.00
IUUC-Tgu-117068	Taeniopygia guttata	52.82	0.00e+00	699.00
IUUC-Tni-119779	Tetraodon nigroviridis	49.12	0.00e+00	667.00
IUUC-Ttr-129285	Tursiops truncatus	51.85	0.00e+00	709.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence