iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058041

Ensembl Protein ID

KEH19706

UniProt Accession

A0A072TR58; A0A072TR58_MEDTR

Genbank Protein ID

KEH19706.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g467040

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g467040	KEH19706	KEH19706

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-27	95.3	117	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt  v+++++  +  +ll+s++ D+ + +W++
   Q: 117  GHTRAVNAIHWssTHaHLLASAGMDNAVFIWNV 149
           8**********9544899*************96 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MELLRNAYSN SSDEEEEPKR LKSSHTSSYP PKPYLPSPSP SLILPGSYVS KRQRASSSSS 60
ISTTTTISSS QSSSFTLSGS ISEADIPHKI VALLKSKAKG HQNLNSIPDK LSATLSGHTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAACACACA CATGGAACTT CTGCGCAACG CTTATTCAAA TTCCTCAGAT GAAGAAGAAG 60
AACCCAAACG ACTAAAATCA TCTCACACTT CTTCATACCC ACCAAAACCC TATCTCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_8g467040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	52.04	2.00e-54	206.00
IUUC-Aml-001588	Ailuropoda melanoleuca	38.98	4.00e-68	251.00
IUUC-Atr-003155	Amborella trichopoda	58.53	6.00e-140	489.00
IUUC-Apl-003544	Anas platyrhynchos	43.13	1.00e-57	214.00
IUUC-Aly-006510	Arabidopsis lyrata	54.47	4.00e-143	500.00
IUUC-Ath-007329	Arabidopsis thaliana	55.31	2.00e-147	514.00
IUUC-Ame-010607	Astyanax mexicanus	41.83	2.00e-48	184.00
IUUC-Bta-013542	Bos taurus	37.38	6.00e-66	244.00
IUUC-Bdi-014736	Brachypodium distachyon	56.38	1.00e-128	452.00
IUUC-Bol-016112	Brassica oleracea	56.70	8.00e-144	502.00
IUUC-Bra-016685	Brassica rapa	56.15	4.00e-144	503.00
IUUC-Cja-018883	Callithrix jacchus	34.95	8.00e-66	243.00
IUUC-Cfa-021278	Canis familiaris	38.66	1.00e-67	249.00
IUUC-Cpo-022449	Cavia porcellus	35.19	8.00e-63	233.00
IUUC-Csa-023916	Chlorocebus sabaeus	34.95	5.00e-65	241.00
IUUC-Cin-025210	Ciona intestinalis	34.48	2.00e-42	164.00
IUUC-Csv-026371	Ciona savignyi	32.37	2.00e-35	142.00
IUUC-Eca-033484	Equus caballus	38.66	2.00e-66	245.00
IUUC-Fca-035673	Felis catus	39.37	2.00e-68	253.00
IUUC-Fal-036795	Ficedula albicollis	37.39	6.00e-72	263.00
IUUC-Gmo-039062	Gadus morhua	38.01	5.00e-56	210.00
IUUC-Gga-040773	Gallus gallus	40.07	3.00e-64	238.00
IUUC-Gac-042364	Gasterosteus aculeatus	38.79	8.00e-60	223.00
IUUC-Gma-043100	Glycine max	75.76	1.00e-179	622.00
IUUC-Ggo-045220	Gorilla gorilla	36.28	5.00e-65	241.00
IUUC-Hsa-046511	Homo sapiens	36.28	7.00e-65	240.00
IUUC-Hvu-047431	Hordeum vulgare	60.65	8.00e-126	442.00
IUUC-Lch-049590	Latimeria chalumnae	42.59	7.00e-68	249.00
IUUC-Lpe-050810	Leersia perrieri	65.56	2.00e-99	355.00
IUUC-Loc-052196	Lepisosteus oculatus	38.85	2.00e-70	258.00
IUUC-Mcc-055622	Macaca mulatta	35.95	1.00e-65	243.00
IUUC-Mga-060149	Meleagris gallopavo	43.06	5.00e-57	213.00
IUUC-Mmr-061552	Microcebus murinus	37.54	3.00e-65	242.00
IUUC-Mdo-061969	Monodelphis domestica	37.58	9.00e-68	250.00
IUUC-Mmu-063343	Mus musculus	38.17	2.00e-64	239.00
IUUC-Mac-065079	Musa acuminata	55.84	3.00e-129	454.00
IUUC-Mpu-065949	Mustela putorius furo	39.76	1.00e-49	190.00
IUUC-Mlu-067523	Myotis lucifugus	37.70	3.00e-45	175.00
IUUC-Ont-072361	Oreochromis niloticus	38.02	1.00e-68	253.00
IUUC-Oba-075367	Oryza barthii	58.45	4.00e-118	417.00
IUUC-Obr-076738	Oryza brachyantha	61.54	1.00e-118	419.00
IUUC-Ogu-078590	Oryza glumaepatula	58.45	5.00e-118	417.00
IUUC-Oin-079678	Oryza indica	59.31	7.00e-126	443.00
IUUC-Olo-080453	Oryza longistaminata	65.70	5.00e-113	399.00
IUUC-Ome-081794	Oryza meridionalis	56.82	2.00e-97	348.00
IUUC-Oni-082432	Oryza nivara	59.31	1.00e-125	442.00
IUUC-Opu-083897	Oryza punctata	58.18	9.00e-126	442.00
IUUC-Oru-085068	Oryza rufipogon	56.45	3.00e-115	407.00
IUUC-Osa-085805	Oryza sativa	58.78	3.00e-125	441.00
IUUC-Ola-087567	Oryzias latipes	40.15	1.00e-62	232.00
IUUC-Oga-088168	Otolemur garnettii	38.22	2.00e-65	243.00
IUUC-Oar-090158	Ovis aries	36.42	1.00e-58	219.00
IUUC-Ptr-090913	Pan troglodytes	29.65	1.00e-45	176.00
IUUC-Pan-092157	Papio anubis	34.95	4.00e-65	241.00
IUUC-Psi-093817	Pelodiscus sinensis	40.15	1.00e-64	238.00
IUUC-Pma-094263	Petromyzon marinus	39.33	1.00e-40	158.00
IUUC-Ppa-095302	Physcomitrella patens	45.19	3.00e-102	364.00
IUUC-Pfo-097526	Poecilia formosa	38.02	2.00e-68	252.00
IUUC-Pab-098152	Pongo abelii	36.20	4.00e-54	204.00
IUUC-Pop-099987	Populus trichocarpa	71.61	5.00e-143	499.00
IUUC-Ppe-101575	Prunus persica	58.41	1.00e-145	508.00
IUUC-Pva-102942	Pteropus vampyrus	40.38	2.00e-67	249.00
IUUC-Rno-104857	Rattus norvegicus	38.17	2.00e-64	239.00
IUUC-Sha-106763	Sarcophilus harrisii	37.16	1.00e-68	253.00
IUUC-Sit-110488	Setaria italica	56.00	3.00e-118	417.00
IUUC-Sly-110893	Solanum lycopersicum	58.53	1.00e-139	488.00
IUUC-Stu-112566	Solanum tuberosum	58.29	8.00e-138	483.00
IUUC-Sar-113617	Sorex araneus	42.86	3.00e-31	129.00
IUUC-Sbi-114566	Sorghum bicolor	54.66	3.00e-124	437.00
IUUC-Tgu-117015	Taeniopygia guttata	37.69	5.00e-72	263.00
IUUC-Tca-121587	Theobroma cacao	63.66	1.00e-149	522.00
IUUC-Tae-123717	Triticum aestivum	58.22	3.00e-128	451.00
IUUC-Tur-126075	Triticum urartu	57.23	2.00e-56	212.00
IUUC-Tbe-127502	Tupaia belangeri	28.98	3.00e-40	159.00
IUUC-Ttr-129033	Tursiops truncatus	37.70	5.00e-66	244.00
IUUC-Vvi-131505	Vitis vinifera	63.81	2.00e-156	544.00
IUUC-Xtr-132851	Xenopus tropicalis	40.19	6.00e-54	202.00
IUUC-Xma-133463	Xiphophorus maculatus	38.69	4.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence