iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114566

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G040100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g003460	Sb08g003460.1	Sb08g003460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-25	88.8	147	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt  ++c+++  s  +ll+s++ D++++vW++
   Q: 147  GHTKAINCVDWspSHgHLLASAGMDHKVHVWNV 179
           8***********7557899************96 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDLLSAAYGA TSDDEDAADP PSSVPVATGS ASFAPPPLKR PRWESHQYLP PTHCFPQQPL 60
LNTVTPLASP SSGRYVSKRE RALLASSQVH VESGSPLSPV TRAEVYCAVG SINNTNLRAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCCGTCGA CTCGTAGGAT TCGTGTCTGG CGGCCGGCGG CCCCTCCCTC CCGCTGCGCC 60
GTCGCCTCCA TCCCCGCACT CCTCCCCTGC CGCTGCGGCG CCATCGTCGC CTCCTCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_08g003460

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000454	Aegilops tauschii	56.25	2.00e-75	276.00
IUUC-Aml-001588	Ailuropoda melanoleuca	37.06	2.00e-63	235.00
IUUC-Atr-003155	Amborella trichopoda	51.54	3.00e-121	427.00
IUUC-Apl-003544	Anas platyrhynchos	42.65	9.00e-57	211.00
IUUC-Aly-006510	Arabidopsis lyrata	48.80	2.00e-121	427.00
IUUC-Ath-007329	Arabidopsis thaliana	54.71	7.00e-122	429.00
IUUC-Ame-010607	Astyanax mexicanus	41.82	7.00e-51	192.00
IUUC-Bta-013542	Bos taurus	35.46	9.00e-61	227.00
IUUC-Bdi-014736	Brachypodium distachyon	71.14	0.00e+00	626.00
IUUC-Bol-016112	Brassica oleracea	50.00	6.00e-122	429.00
IUUC-Bra-016685	Brassica rapa	50.00	2.00e-122	431.00
IUUC-Cja-018883	Callithrix jacchus	37.38	2.00e-63	235.00
IUUC-Cfa-021278	Canis familiaris	36.74	8.00e-63	233.00
IUUC-Cpo-022449	Cavia porcellus	35.33	2.00e-59	222.00
IUUC-Csa-023916	Chlorocebus sabaeus	37.06	2.00e-63	235.00
IUUC-Cin-025210	Ciona intestinalis	31.80	2.00e-38	151.00
IUUC-Csv-026371	Ciona savignyi	29.48	2.00e-32	131.00
IUUC-Eca-033484	Equus caballus	37.22	1.00e-62	233.00
IUUC-Fca-035673	Felis catus	36.91	8.00e-63	233.00
IUUC-Fal-036795	Ficedula albicollis	39.49	6.00e-73	266.00
IUUC-Gmo-039062	Gadus morhua	36.16	9.00e-52	196.00
IUUC-Gga-040773	Gallus gallus	39.71	3.00e-65	241.00
IUUC-Gac-042364	Gasterosteus aculeatus	39.49	6.00e-58	216.00
IUUC-Gma-043100	Glycine max	51.22	2.00e-122	431.00
IUUC-Ggo-045220	Gorilla gorilla	37.06	2.00e-63	236.00
IUUC-Hsa-046511	Homo sapiens	37.06	2.00e-63	235.00
IUUC-Hvu-047431	Hordeum vulgare	78.36	6.00e-166	575.00
IUUC-Lch-049590	Latimeria chalumnae	40.66	2.00e-65	241.00
IUUC-Lpe-050810	Leersia perrieri	82.72	2.00e-126	444.00
IUUC-Loc-052196	Lepisosteus oculatus	40.51	2.00e-72	265.00
IUUC-Mcc-055622	Macaca mulatta	37.06	3.00e-63	234.00
IUUC-Mtr-058041	Medicago truncatula	61.86	1.00e-114	405.00
IUUC-Mga-060149	Meleagris gallopavo	41.15	2.00e-56	210.00
IUUC-Mmr-061552	Microcebus murinus	37.70	4.00e-63	234.00
IUUC-Mdo-061969	Monodelphis domestica	39.37	6.00e-70	257.00
IUUC-Mmu-063343	Mus musculus	36.74	2.00e-61	229.00
IUUC-Mac-065079	Musa acuminata	54.81	9.00e-125	439.00
IUUC-Mpu-065949	Mustela putorius furo	37.30	9.00e-47	180.00
IUUC-Mlu-067523	Myotis lucifugus	36.18	3.00e-44	172.00
IUUC-Ont-072361	Oreochromis niloticus	37.86	3.00e-68	252.00
IUUC-Oba-075367	Oryza barthii	72.48	6.00e-168	582.00
IUUC-Obr-076738	Oryza brachyantha	75.45	1.00e-176	611.00
IUUC-Ogu-078590	Oryza glumaepatula	72.71	2.00e-168	584.00
IUUC-Oin-079678	Oryza indica	72.73	1.00e-175	608.00
IUUC-Olo-080453	Oryza longistaminata	82.31	2.00e-141	494.00
IUUC-Ome-081794	Oryza meridionalis	69.97	4.00e-140	490.00
IUUC-Oni-082432	Oryza nivara	72.51	2.00e-175	607.00
IUUC-Opu-083897	Oryza punctata	78.80	2.00e-169	587.00
IUUC-Oru-085068	Oryza rufipogon	70.47	4.00e-165	573.00
IUUC-Osa-085805	Oryza sativa	72.28	3.00e-175	606.00
IUUC-Ola-087567	Oryzias latipes	39.78	8.00e-59	219.00
IUUC-Oga-088168	Otolemur garnettii	37.06	2.00e-62	232.00
IUUC-Oar-090158	Ovis aries	35.14	3.00e-54	205.00
IUUC-Ptr-090913	Pan troglodytes	30.99	1.00e-44	173.00
IUUC-Pan-092157	Papio anubis	37.06	2.00e-63	235.00
IUUC-Psi-093817	Pelodiscus sinensis	40.22	2.00e-64	238.00
IUUC-Pma-094263	Petromyzon marinus	40.56	6.00e-39	152.00
IUUC-Ppa-095302	Physcomitrella patens	46.01	3.00e-100	358.00
IUUC-Pfo-097526	Poecilia formosa	38.78	2.00e-68	252.00
IUUC-Pab-098152	Pongo abelii	37.45	6.00e-53	201.00
IUUC-Pop-099987	Populus trichocarpa	56.35	2.00e-123	434.00
IUUC-Ppe-101575	Prunus persica	51.11	1.00e-122	432.00
IUUC-Pva-102942	Pteropus vampyrus	37.06	5.00e-64	237.00
IUUC-Rno-104857	Rattus norvegicus	37.06	7.00e-62	230.00
IUUC-Sha-106763	Sarcophilus harrisii	39.05	3.00e-70	258.00
IUUC-Sit-110488	Setaria italica	83.18	0.00e+00	697.00
IUUC-Sly-110893	Solanum lycopersicum	51.45	2.00e-116	411.00
IUUC-Stu-112566	Solanum tuberosum	50.78	2.00e-116	411.00
IUUC-Sar-113617	Sorex araneus	28.70	5.00e-29	121.00
IUUC-Tgu-117015	Taeniopygia guttata	38.85	3.00e-72	264.00
IUUC-Tca-121587	Theobroma cacao	57.18	2.00e-122	431.00
IUUC-Tae-123988	Triticum aestivum	80.21	6.00e-171	592.00
IUUC-Tur-126075	Triticum urartu	74.57	8.00e-71	259.00
IUUC-Tbe-127502	Tupaia belangeri	29.07	1.00e-38	153.00
IUUC-Ttr-129033	Tursiops truncatus	36.22	1.00e-62	233.00
IUUC-Vvi-131505	Vitis vinifera	56.38	5.00e-124	436.00
IUUC-Xtr-132851	Xenopus tropicalis	38.76	9.00e-49	185.00
IUUC-Xma-133463	Xiphophorus maculatus	38.60	1.00e-68	252.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence