iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114454

Ensembl Protein ID

Sb04g027190.1

UniProt Accession

C5XY88; C5XY88_SORBI

Genbank Protein ID

EES05484.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G227500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g027190	Sb04g027190.1	Sb04g027190.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-25	86.6	475	505

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           Htd vtc++f   +d++++sGs D ++++W+
   Q: 475  HTDYVTCVQFnpvDDRYFISGSLDEKVRIWS 505
           ************766***************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSVEEEVERG EEEEEEEDLF YESLDRILSS SGSSTSASDD DDGADRPRRS RGCDAPAAAA 60
ALDLWTSQPA SVQERRRRLL QLMGLAGDPS LAGFETGRSA SEDAAGPPPA SPVSRSRSGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTGG AGGAGGAGGT GGAGCGCGGG GAGGAAGAGG AAGAGGAGGA GGACCTGTTC 60
TACGAGTCGC TCGACCGCAT CCTCTCCTCC TCGGGCTCCT CCACCTCCGC CTCGGACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

sbi:SORBI_04g027120

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000228	Aegilops tauschii	63.60	0.00e+00	811.00
IUUC-Apl-003781	Anas platyrhynchos	30.58	1.00e-61	230.00
IUUC-Aly-005544	Arabidopsis lyrata	50.07	2.00e-143	501.00
IUUC-Ath-007572	Arabidopsis thaliana	45.30	9.00e-150	523.00
IUUC-Afu-008761	Aspergillus fumigatus	31.67	1.00e-56	214.00
IUUC-Bgr-012014	Blumeria graminis	37.50	3.00e-59	222.00
IUUC-Bta-012991	Bos taurus	37.03	9.00e-61	228.00
IUUC-Bci-013651	Botrytis cinerea	32.90	3.00e-62	233.00
IUUC-Bdi-014809	Brachypodium distachyon	73.22	0.00e+00	963.00
IUUC-Cfa-020909	Canis familiaris	37.03	6.00e-61	228.00
IUUC-Cin-025347	Ciona intestinalis	36.86	2.00e-59	223.00
IUUC-Cgl-026610	Colletotrichum gloeosporioides	36.01	2.00e-56	213.00
IUUC-Cme-027130	Cyanidioschyzon merolae	31.06	4.00e-51	196.00
IUUC-Dre-028529	Danio rerio	36.49	8.00e-60	224.00
IUUC-Dor-030184	Dipodomys ordii	39.69	5.00e-48	185.00
IUUC-Dse-031178	Dothistroma septosporum	31.35	2.00e-64	239.00
IUUC-Ete-032457	Echinops telfairi	30.46	7.00e-44	171.00
IUUC-Eca-033319	Equus caballus	37.03	5.00e-61	228.00
IUUC-Fca-036159	Felis catus	34.01	1.00e-55	210.00
IUUC-Fal-037153	Ficedula albicollis	30.76	2.00e-61	229.00
IUUC-Gga-040349	Gallus gallus	30.58	1.00e-61	230.00
IUUC-Gac-041620	Gasterosteus aculeatus	35.68	1.00e-59	223.00
IUUC-Ggo-044646	Gorilla gorilla	37.03	8.00e-61	228.00
IUUC-Hsa-046353	Homo sapiens	37.03	8.00e-61	228.00
IUUC-Hvu-047755	Hordeum vulgare	70.54	0.00e+00	903.00
IUUC-Itr-048620	Ictidomys tridecemlineatus	34.94	9.00e-62	231.00
IUUC-Kpa-049365	Komagataella pastoris	31.37	9.00e-42	164.00
IUUC-Lch-049794	Latimeria chalumnae	35.68	4.00e-60	225.00
IUUC-Lpe-051282	Leersia perrieri	72.23	0.00e+00	984.00
IUUC-Lma-053232	Leptosphaeria maculans	35.58	6.00e-59	221.00
IUUC-Meu-056678	Macropus eugenii	30.19	1.00e-40	160.00
IUUC-Mor-057274	Magnaporthe oryzae	32.81	5.00e-57	215.00
IUUC-Mga-059659	Meleagris gallopavo	30.59	2.00e-60	226.00
IUUC-Mmr-060832	Microcebus murinus	37.30	4.00e-61	229.00
IUUC-Mmu-064277	Mus musculus	34.87	1.00e-60	227.00
IUUC-Mpu-065914	Mustela putorius furo	34.71	2.00e-61	229.00
IUUC-Mlu-067853	Myotis lucifugus	37.03	6.00e-61	228.00
IUUC-Ncr-068874	Neurospora crassa	35.29	4.00e-56	213.00
IUUC-Nle-069802	Nomascus leucogenys	37.03	8.00e-61	228.00
IUUC-Opr-071139	Ochotona princeps	40.46	1.00e-48	187.00
IUUC-Oan-072824	Ornithorhynchus anatinus	36.51	1.00e-47	183.00
IUUC-Ocu-074311	Oryctolagus cuniculus	34.38	4.00e-61	229.00
IUUC-Oba-075809	Oryza barthii	70.26	0.00e+00	978.00
IUUC-Ogu-077983	Oryza glumaepatula	70.47	0.00e+00	981.00
IUUC-Oin-079380	Oryza indica	70.60	0.00e+00	984.00
IUUC-Olo-080307	Oryza longistaminata	66.85	0.00e+00	871.00
IUUC-Ome-081629	Oryza meridionalis	70.62	0.00e+00	978.00
IUUC-Oni-082328	Oryza nivara	70.60	0.00e+00	984.00
IUUC-Opu-083402	Oryza punctata	70.15	0.00e+00	1009.00
IUUC-Oru-085107	Oryza rufipogon	69.41	0.00e+00	1001.00
IUUC-Osa-086211	Oryza sativa	73.94	0.00e+00	677.00
IUUC-Pma-094528	Petromyzon marinus	34.53	9.00e-45	173.00
IUUC-Pno-094806	Phaeosphaeria nodorum	33.42	2.00e-54	205.00
IUUC-Pva-102846	Pteropus vampyrus	45.69	8.00e-48	184.00
IUUC-Rno-105467	Rattus norvegicus	34.87	9.00e-61	228.00
IUUC-Sha-106778	Sarcophilus harrisii	34.09	5.00e-61	228.00
IUUC-Spo-108181	Schizosaccharomyces pombe	38.60	3.00e-56	213.00
IUUC-Smo-108748	Selaginella moellendorffii	36.35	8.00e-100	357.00
IUUC-Sit-109842	Setaria italica	83.13	0.00e+00	1128.00
IUUC-Tgu-116614	Taeniopygia guttata	30.64	1.00e-61	230.00
IUUC-Tni-120013	Tetraodon nigroviridis	36.04	5.00e-55	208.00
IUUC-Tae-123388	Triticum aestivum	68.87	0.00e+00	967.00
IUUC-Tur-126660	Triticum urartu	69.02	0.00e+00	905.00
IUUC-Tme-126882	Tuber melanosporum	35.85	1.00e-64	241.00
IUUC-Tbe-127531	Tupaia belangeri	45.69	1.00e-46	181.00
IUUC-Ttr-128970	Tursiops truncatus	34.71	2.00e-61	229.00
IUUC-Vda-129935	Verticillium dahliae	31.40	4.00e-54	206.00
IUUC-Vpa-130109	Vicugna pacos	39.69	5.00e-48	185.00
IUUC-Xtr-132836	Xenopus tropicalis	36.39	8.00e-60	224.00
IUUC-Zma-135960	Zea mays	90.03	0.00e+00	1239.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence