iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095422

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545005

Gene Name

PHYPADRAFT_45671

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S116_81V6	PP1S116_81V6.1	PP1S116_81V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-19	68.7	270	297
UBD/Beta-Prp	4.20e-48	164.8	110	298

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDl 30
           +v  laf +d ++l s+s+D+t+k+WD+
   Q: 270  PVERLAFsHDrNILGSASHDNTLKLWDV 297
           56778999889****************8 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           +++ +a+g + g+ikvwd++  k+  +++ he++v++++f p ++ l+ ++ D+++ + +l+ + +  + +  ed++ls+ +++ g+k++ Gs+d
   Q: 110  GDTTVASGDDEGCIKVWDTRHNKCCNTFEAHEDFVADMEFLPGSNQLLGVGGDGILSICNLRRNRIDAKTQFAEDELLSVVLCKHGQKVICGSQD 204
           7889******************************************************************************************* PP
   S: 116  rtirvwdletgqcleetlsghdgvvncv.vvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
            ++ ++ +      ++ + gh  +v  + +v++  + l +Gs D+++r+ ++  +k++    +  + +v+ l+f+++++ l s+s+d+t+klwd+
   Q: 205  GVLLLYSWGAMADCSDRFVGHPNSVDALlKVDE--DTLLTGSSDGIIRIVSILPNKMIGVIGEHADFPVERLAFSHDRNILGSASHDNTLKLWDV 297
           ********9999888899999988876515555..999***********************886777***************************9 PP
   S: 210  q 210
           +
   Q: 298  K 298
           8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGDTTLEIDL GTQPFDLAFH PSANLVAVAL ITGHVQLYKY GGDGGEVARL WNSAAHSESC 60
RAVRFAQGGQ FVLTASPDKS ILATDVETGQ PVARLADAHG VPINRLVNCG DTTVASGDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGGTTTCAG CTCATCACCA TTTCGAGGAC ATGGATGAAA ACCTTTTTCA GAGACTGGGG 60
TCTTTCTAGG GTTTGGGGGG ACGCAGGGTG TGCTTGCGGA AGCATGTTCT GCGAGAGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009855--P:determination of bilateral symmetry
GO:0080186--P:developmental vegetative growth
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

ppp:PHYPADRAFT_45671

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	48.99	1.00e-91	329.00
IUUC-Aml-001768	Ailuropoda melanoleuca	41.47	2.00e-67	250.00
IUUC-Atr-002764	Amborella trichopoda	56.49	3.00e-49	186.00
IUUC-Apl-003880	Anas platyrhynchos	37.60	7.00e-49	188.00
IUUC-Aca-005060	Anolis carolinensis	37.54	2.00e-59	223.00
IUUC-Aly-006484	Arabidopsis lyrata	51.17	1.00e-81	295.00
IUUC-Ath-006652	Arabidopsis thaliana	55.78	8.00e-97	346.00
IUUC-Acl-008007	Aspergillus clavatus	23.50	1.00e-12	66.60
IUUC-Bgr-012123	Blumeria graminis	21.80	1.00e-08	53.90
IUUC-Bta-013497	Bos taurus	41.14	5.00e-66	244.00
IUUC-Bdi-014378	Brachypodium distachyon	55.92	2.00e-102	364.00
IUUC-Bol-016352	Brassica oleracea	54.36	3.00e-94	337.00
IUUC-Bra-017819	Brassica rapa	55.37	2.00e-95	341.00
IUUC-Cel-018192	Caenorhabditis elegans	20.45	1.00e-10	59.70
IUUC-Cja-018792	Callithrix jacchus	41.47	1.00e-66	245.00
IUUC-Cfa-020739	Canis familiaris	41.40	7.00e-67	248.00
IUUC-Cpo-022331	Cavia porcellus	41.14	3.00e-66	244.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	47.87	4.00e-48	182.00
IUUC-Csa-023414	Chlorocebus sabaeus	41.14	2.00e-66	245.00
IUUC-Cho-024600	Choloepus hoffmanni	40.27	6.00e-63	233.00
IUUC-Cin-025565	Ciona intestinalis	36.81	5.00e-51	194.00
IUUC-Csv-026294	Ciona savignyi	35.62	5.00e-48	184.00
IUUC-Cne-026979	Cryptococcus neoformans	36.39	3.00e-52	198.00
IUUC-Cme-027192	Cyanidioschyzon merolae	30.39	2.00e-20	93.20
IUUC-Dre-028492	Danio rerio	36.62	7.00e-57	213.00
IUUC-Dno-030050	Dasypus novemcinctus	39.07	9.00e-59	221.00
IUUC-Dor-030386	Dipodomys ordii	37.00	7.00e-53	200.00
IUUC-Dme-032012	Drosophila melanogaster	30.33	1.00e-42	166.00
IUUC-Ete-032491	Echinops telfairi	41.47	1.00e-66	246.00
IUUC-Eca-033583	Equus caballus	41.14	7.00e-67	248.00
IUUC-Eeu-034976	Erinaceus europaeus	42.05	1.00e-60	226.00
IUUC-Fca-036417	Felis catus	39.66	3.00e-68	251.00
IUUC-Gmo-039505	Gadus morhua	35.91	7.00e-59	220.00
IUUC-Gga-040732	Gallus gallus	37.00	6.00e-57	213.00
IUUC-Gac-041313	Gasterosteus aculeatus	36.58	1.00e-58	219.00
IUUC-Gma-044122	Glycine max	60.41	5.00e-106	376.00
IUUC-Ggo-044748	Gorilla gorilla	40.80	5.00e-66	244.00
IUUC-Hsa-046943	Homo sapiens	41.47	3.00e-66	244.00
IUUC-Hvu-047659	Hordeum vulgare	54.55	7.00e-103	366.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	41.47	2.00e-67	248.00
IUUC-Lch-050331	Latimeria chalumnae	34.60	1.00e-48	186.00
IUUC-Lpe-051193	Leersia perrieri	59.93	1.00e-105	375.00
IUUC-Loc-051946	Lepisosteus oculatus	36.84	1.00e-61	230.00
IUUC-Lma-052960	Leptosphaeria maculans	26.90	8.00e-20	90.90
IUUC-Laf-054035	Loxodonta africana	41.14	3.00e-67	248.00
IUUC-Mcc-055285	Macaca mulatta	37.50	3.00e-29	120.00
IUUC-Meu-056596	Macropus eugenii	40.27	1.00e-64	239.00
IUUC-Mor-056995	Magnaporthe oryzae	24.47	5.00e-11	61.20
IUUC-Mpo-057482	Magnaporthe poae	26.11	4.00e-17	81.60
IUUC-Mtr-058587	Medicago truncatula	58.98	2.00e-105	375.00
IUUC-Mga-059839	Meleagris gallopavo	38.71	4.00e-38	152.00
IUUC-Mdo-062868	Monodelphis domestica	40.47	2.00e-65	243.00
IUUC-Mmu-064305	Mus musculus	41.14	2.00e-66	245.00
IUUC-Mac-065041	Musa acuminata	55.33	3.00e-111	394.00
IUUC-Mpu-066779	Mustela putorius furo	41.14	2.00e-67	248.00
IUUC-Mlu-067223	Myotis lucifugus	41.14	2.00e-64	239.00
IUUC-Ncr-068919	Neurospora crassa	23.39	2.00e-08	53.10
IUUC-Nle-069852	Nomascus leucogenys	40.47	9.00e-65	239.00
IUUC-Ont-072452	Oreochromis niloticus	37.25	7.00e-62	230.00
IUUC-Oan-073163	Ornithorhynchus anatinus	43.64	1.00e-22	98.60
IUUC-Ocu-074628	Oryctolagus cuniculus	41.47	9.00e-67	246.00
IUUC-Oba-075868	Oryza barthii	58.89	2.00e-103	368.00
IUUC-Obr-076768	Oryza brachyantha	60.28	2.00e-107	381.00
IUUC-Ogl-077424	Oryza glaberrima	59.93	5.00e-107	380.00
IUUC-Ogu-078847	Oryza glumaepatula	59.23	7.00e-104	369.00
IUUC-Oin-079495	Oryza indica	59.93	5.00e-107	380.00
IUUC-Olo-080268	Oryza longistaminata	59.58	3.00e-104	370.00
IUUC-Ome-081709	Oryza meridionalis	57.85	2.00e-92	331.00
IUUC-Oni-082749	Oryza nivara	59.93	5.00e-107	380.00
IUUC-Opu-084023	Oryza punctata	50.52	6.00e-81	293.00
IUUC-Oru-084764	Oryza rufipogon	59.23	7.00e-104	369.00
IUUC-Osa-086009	Oryza sativa	59.58	2.00e-106	377.00
IUUC-Ola-086463	Oryzias latipes	35.62	2.00e-54	205.00
IUUC-Olu-087897	Ostreococcus lucimarinus	44.52	3.00e-68	251.00
IUUC-Oga-089114	Otolemur garnettii	41.81	2.00e-68	251.00
IUUC-Ptr-090556	Pan troglodytes	40.80	4.00e-66	244.00
IUUC-Pan-092828	Papio anubis	41.14	4.00e-66	244.00
IUUC-Psi-093609	Pelodiscus sinensis	35.14	8.00e-49	187.00
IUUC-Pma-094413	Petromyzon marinus	39.07	2.00e-51	196.00
IUUC-Pno-094833	Phaeosphaeria nodorum	26.48	2.00e-13	69.70
IUUC-Pfo-096389	Poecilia formosa	36.91	8.00e-59	220.00
IUUC-Pab-098095	Pongo abelii	40.80	5.00e-66	243.00
IUUC-Pop-099612	Populus trichocarpa	57.34	2.00e-97	347.00
IUUC-Pca-100408	Procavia capensis	40.47	1.00e-65	243.00
IUUC-Ppe-101931	Prunus persica	59.04	8.00e-98	349.00
IUUC-Pva-102549	Pteropus vampyrus	40.13	1.00e-64	239.00
IUUC-Pte-104351	Pyrenophora teres	24.86	3.00e-15	77.00
IUUC-Rno-105079	Rattus norvegicus	41.47	3.00e-67	249.00
IUUC-Sha-107299	Sarcophilus harrisii	41.14	7.00e-62	231.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.77	9.00e-20	90.50
IUUC-Spo-108122	Schizosaccharomyces pombe	26.67	4.00e-24	104.00
IUUC-Smo-109613	Selaginella moellendorffii	59.12	1.00e-97	348.00
IUUC-Sit-110621	Setaria italica	55.59	4.00e-102	363.00
IUUC-Sly-110988	Solanum lycopersicum	56.63	8.00e-98	349.00
IUUC-Stu-112713	Solanum tuberosum	57.81	5.00e-99	353.00
IUUC-Sbi-114617	Sorghum bicolor	55.56	2.00e-99	354.00
IUUC-Sre-115136	Sporisorium reilianum	40.67	3.00e-20	92.40
IUUC-Ssc-116268	Sus scrofa	40.47	5.00e-66	245.00
IUUC-Tgu-116720	Taeniopygia guttata	32.05	6.00e-30	125.00
IUUC-Tru-117977	Takifugu rubripes	37.58	6.00e-57	214.00
IUUC-Tsy-119121	Tarsius syrichta	42.59	2.00e-37	148.00
IUUC-Tni-119904	Tetraodon nigroviridis	38.26	1.00e-59	222.00
IUUC-Tca-121718	Theobroma cacao	59.73	4.00e-102	363.00
IUUC-Tre-122059	Trichoderma reesei	22.66	2.00e-10	59.30
IUUC-Tae-124377	Triticum aestivum	56.39	1.00e-101	362.00
IUUC-Tme-126922	Tuber melanosporum	25.33	1.00e-18	87.40
IUUC-Tbe-127276	Tupaia belangeri	41.83	7.00e-61	226.00
IUUC-Uma-129505	Ustilago maydis	42.74	7.00e-24	104.00
IUUC-Vpa-130276	Vicugna pacos	39.37	4.00e-44	170.00
IUUC-Vvi-131377	Vitis vinifera	53.69	2.00e-105	376.00
IUUC-Xtr-132529	Xenopus tropicalis	35.92	8.00e-59	221.00
IUUC-Xma-134177	Xiphophorus maculatus	36.58	2.00e-56	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence