iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	circBase	miRTarBase	microRNA
TRANSFAC	RepTar	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-06	27.9	277	318

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C e +   d +++lpC H+fh++C+  w         + +CP C+
   Q: 277  CAVCIEGYkpNDVVRILPCRHLFHKSCVDPW------LLDHRTCPMCK 318
           ******9977777******************......9999******6 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MTMSLIQACR SLALSTWLLS FCFVHLLCLD FTVAEKEEWY TAFVNITYLE PEPGAAVAGS 60
GGGAELHTEK SECGRYGEHS PKQDARGEVV MASSAQDRLA CDPNTKFAAP AHGKHWIALI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACACACAC ACACACACAC ACAAATACAG ACACACACAA AACGCTGTAT CCCTCTCCTC 60
ACGCTCTCCC CCATCCCATC TGCCCCGTAC CTCCCCCTCC CTCGGCAAGT GAGTGTCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0325--Glycoprotein
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mmu:330812

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001200	Ailuropoda melanoleuca	94.05	0.00e+00	800.00
IUUC-Apl-003591	Anas platyrhynchos	81.95	1.00e-180	625.00
IUUC-Aca-005079	Anolis carolinensis	83.56	0.00e+00	713.00
IUUC-Afl-008635	Aspergillus flavus	31.96	7.00e-11	60.10
IUUC-Aor-010099	Aspergillus oryzae	31.96	7.00e-11	60.10
IUUC-Ame-011502	Astyanax mexicanus	73.85	5.00e-174	603.00
IUUC-Cel-018489	Caenorhabditis elegans	62.20	3.00e-46	179.00
IUUC-Cja-019787	Callithrix jacchus	94.06	0.00e+00	801.00
IUUC-Cfa-020032	Canis familiaris	90.62	0.00e+00	675.00
IUUC-Cpo-021302	Cavia porcellus	96.39	1.00e-148	518.00
IUUC-Cin-025124	Ciona intestinalis	42.97	2.00e-56	212.00
IUUC-Csv-026229	Ciona savignyi	43.56	1.00e-58	220.00
IUUC-Dre-027477	Danio rerio	69.70	1.00e-157	549.00
IUUC-Dno-029556	Dasypus novemcinctus	93.38	0.00e+00	796.00
IUUC-Dme-032142	Drosophila melanogaster	42.80	4.00e-59	222.00
IUUC-Ete-032463	Echinops telfairi	81.60	5.00e-144	503.00
IUUC-Eca-034072	Equus caballus	94.53	0.00e+00	811.00
IUUC-Fal-036944	Ficedula albicollis	83.17	0.00e+00	673.00
IUUC-Gmo-038987	Gadus morhua	76.75	1.00e-131	462.00
IUUC-Gga-040384	Gallus gallus	84.70	0.00e+00	728.00
IUUC-Gac-041902	Gasterosteus aculeatus	59.36	7.00e-146	509.00
IUUC-Gma-043459	Glycine max	28.26	3.00e-13	69.30
IUUC-Ggo-044815	Gorilla gorilla	88.36	0.00e+00	738.00
IUUC-Hsa-046593	Homo sapiens	93.38	0.00e+00	795.00
IUUC-Lch-050560	Latimeria chalumnae	79.78	3.00e-119	421.00
IUUC-Loc-052693	Lepisosteus oculatus	79.73	0.00e+00	680.00
IUUC-Laf-054210	Loxodonta africana	92.48	0.00e+00	786.00
IUUC-Mcc-055247	Macaca mulatta	84.93	0.00e+00	736.00
IUUC-Meu-056255	Macropus eugenii	73.95	3.00e-131	461.00
IUUC-Mga-059708	Meleagris gallopavo	90.61	4.00e-139	486.00
IUUC-Mmr-061307	Microcebus murinus	94.22	0.00e+00	733.00
IUUC-Mdo-062435	Monodelphis domestica	92.42	4.00e-142	496.00
IUUC-Mpu-066007	Mustela putorius furo	93.15	0.00e+00	798.00
IUUC-Mlu-067534	Myotis lucifugus	95.67	1.00e-147	515.00
IUUC-Nle-069110	Nomascus leucogenys	93.61	0.00e+00	798.00
IUUC-Opr-070206	Ochotona princeps	87.44	0.00e+00	733.00
IUUC-Ont-071559	Oreochromis niloticus	69.41	5.00e-171	593.00
IUUC-Ocu-074084	Oryctolagus cuniculus	92.91	0.00e+00	790.00
IUUC-Ola-086771	Oryzias latipes	68.00	9.00e-87	313.00
IUUC-Oga-088326	Otolemur garnettii	93.36	0.00e+00	802.00
IUUC-Oar-089501	Ovis aries	93.64	0.00e+00	816.00
IUUC-Ptr-091498	Pan troglodytes	94.29	0.00e+00	804.00
IUUC-Pan-091866	Papio anubis	97.03	3.00e-145	507.00
IUUC-Psi-094085	Pelodiscus sinensis	86.21	0.00e+00	685.00
IUUC-Pma-094718	Petromyzon marinus	64.67	3.00e-98	351.00
IUUC-Pfo-097029	Poecilia formosa	65.22	1.00e-152	532.00
IUUC-Pab-098039	Pongo abelii	93.85	0.00e+00	798.00
IUUC-Pca-100787	Procavia capensis	92.69	0.00e+00	794.00
IUUC-Pva-102884	Pteropus vampyrus	93.36	0.00e+00	793.00
IUUC-Rno-105069	Rattus norvegicus	97.71	0.00e+00	832.00
IUUC-Sha-106655	Sarcophilus harrisii	89.47	5.00e-121	426.00
IUUC-Sar-113043	Sorex araneus	89.21	7.00e-156	542.00
IUUC-Ssc-116062	Sus scrofa	97.03	1.00e-144	505.00
IUUC-Tgu-117497	Taeniopygia guttata	81.90	0.00e+00	691.00
IUUC-Tru-117952	Takifugu rubripes	68.75	7.00e-167	580.00
IUUC-Tsy-119460	Tarsius syrichta	96.01	1.00e-158	551.00
IUUC-Tni-119659	Tetraodon nigroviridis	74.13	1.00e-144	505.00
IUUC-Tur-126504	Triticum urartu	38.30	2.00e-13	69.30
IUUC-Tbe-127574	Tupaia belangeri	79.37	1.00e-129	456.00
IUUC-Ttr-128435	Tursiops truncatus	96.00	1.00e-160	558.00
IUUC-Vpa-130737	Vicugna pacos	95.65	6.00e-146	509.00
IUUC-Xtr-132504	Xenopus tropicalis	82.19	0.00e+00	707.00
IUUC-Xma-133970	Xiphophorus maculatus	64.76	1.00e-151	529.00
IUUC-Yli-134336	Yarrowia lipolytica	52.00	7.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence