iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012668

Ensembl Protein ID

ENSBTAP00000011481.4

UniProt Accession

Q1LZF5; Q1LZF5_BOVIN

Genbank Protein ID

AAI16027.1

Protein Name

DDB1- and CUL4-associated factor 4; WDR21A protein

Genbank Nucleotide ID

DAAA02029584

Gene Name

DCAF4; WDR21A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000008713.4	ENSBTAT00000011481.4	ENSBTAP00000011481.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-06	28.6	372	409

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H + vt+++  ++   l ++   gtik+WDlrt ++++
   Q: 372  HDSAVTSVQIlQEeQCLMASDMAGTIKLWDLRTTKCIR 409
           9999*****98665556666677***********9987 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MHQSSWKSRR HRRRGHRHNA WFRPHGSNES YSCRKDAGVQ QSPQGSSDGH GEAPSTSSTA 60
GSSSVPDLPG YYFDPEKKRY FRLLPGHNNC NPLTKESIRQ KEMERKRLRL LEEEEQQGKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCACGCT TCGCACCCGG CACCTGTGGA CCCTGGGCCC GAGGGAGAGC CGGAAAAAAA 60
TCCTCTGATC GAGTAAGTCT GCGCTGACTG GAGTACTGTT GGCGTCGGTT AGGGGGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	38.78	2.00e-12	66.20
IUUC-Aml-001929	Ailuropoda melanoleuca	85.20	0.00e+00	822.00
IUUC-Atr-002556	Amborella trichopoda	22.12	3.00e-16	80.10
IUUC-Apl-003177	Anas platyrhynchos	70.02	4.00e-173	600.00
IUUC-Aca-004610	Anolis carolinensis	63.91	4.00e-175	607.00
IUUC-Aly-005883	Arabidopsis lyrata	31.85	1.00e-14	74.70
IUUC-Ath-006668	Arabidopsis thaliana	24.18	2.00e-17	84.00
IUUC-Ame-010690	Astyanax mexicanus	61.98	2.00e-152	532.00
IUUC-Bdi-014848	Brachypodium distachyon	31.13	3.00e-14	73.20
IUUC-Bol-016035	Brassica oleracea	32.30	2.00e-15	77.00
IUUC-Bra-016687	Brassica rapa	31.68	1.00e-14	74.30
IUUC-Cja-019560	Callithrix jacchus	84.91	2.00e-79	287.00
IUUC-Cfa-020441	Canis familiaris	84.20	0.00e+00	812.00
IUUC-Cpo-021299	Cavia porcellus	76.51	0.00e+00	753.00
IUUC-Csa-023185	Chlorocebus sabaeus	86.87	0.00e+00	796.00
IUUC-Cho-024353	Choloepus hoffmanni	80.42	0.00e+00	785.00
IUUC-Dno-029890	Dasypus novemcinctus	79.12	0.00e+00	739.00
IUUC-Dor-030618	Dipodomys ordii	85.71	2.00e-85	310.00
IUUC-Ete-032557	Echinops telfairi	66.38	7.00e-127	447.00
IUUC-Eca-033466	Equus caballus	84.74	0.00e+00	836.00
IUUC-Eeu-034995	Erinaceus europaeus	74.36	8.00e-151	526.00
IUUC-Fca-036199	Felis catus	86.67	0.00e+00	810.00
IUUC-Fal-036717	Ficedula albicollis	69.20	1.00e-169	589.00
IUUC-Gmo-039201	Gadus morhua	58.62	9.00e-150	523.00
IUUC-Gga-040398	Gallus gallus	70.67	1.00e-159	556.00
IUUC-Gac-042391	Gasterosteus aculeatus	58.62	2.00e-155	541.00
IUUC-Gma-042906	Glycine max	26.42	5.00e-11	62.80
IUUC-Ggo-045348	Gorilla gorilla	86.18	0.00e+00	793.00
IUUC-Hsa-046746	Homo sapiens	86.41	0.00e+00	797.00
IUUC-Hvu-047825	Hordeum vulgare	31.85	9.00e-15	74.70
IUUC-Itr-048472	Ictidomys tridecemlineatus	80.56	0.00e+00	796.00
IUUC-Lch-050272	Latimeria chalumnae	57.05	9.00e-147	513.00
IUUC-Lpe-051618	Leersia perrieri	28.99	1.00e-13	71.20
IUUC-Loc-051772	Lepisosteus oculatus	56.51	1.00e-160	559.00
IUUC-Laf-054577	Loxodonta africana	73.56	0.00e+00	635.00
IUUC-Mcc-055284	Macaca mulatta	74.02	0.00e+00	646.00
IUUC-Meu-056721	Macropus eugenii	61.48	1.00e-86	313.00
IUUC-Mtr-058472	Medicago truncatula	27.85	1.00e-13	70.90
IUUC-Mga-059238	Meleagris gallopavo	64.00	4.00e-160	557.00
IUUC-Mmr-061642	Microcebus murinus	88.86	0.00e+00	707.00
IUUC-Mdo-062030	Monodelphis domestica	68.89	0.00e+00	634.00
IUUC-Mmu-063420	Mus musculus	78.68	0.00e+00	771.00
IUUC-Mac-065231	Musa acuminata	33.58	2.00e-17	84.00
IUUC-Mpu-065692	Mustela putorius furo	86.00	0.00e+00	822.00
IUUC-Mlu-067428	Myotis lucifugus	82.57	0.00e+00	816.00
IUUC-Nle-070145	Nomascus leucogenys	81.50	0.00e+00	797.00
IUUC-Opr-071081	Ochotona princeps	82.95	0.00e+00	700.00
IUUC-Ont-071302	Oreochromis niloticus	55.62	1.00e-150	526.00
IUUC-Oan-073494	Ornithorhynchus anatinus	57.53	7.00e-123	434.00
IUUC-Ocu-073925	Oryctolagus cuniculus	84.33	0.00e+00	760.00
IUUC-Oba-075797	Oryza barthii	28.93	2.00e-13	70.10
IUUC-Obr-076014	Oryza brachyantha	30.13	2.00e-14	73.60
IUUC-Ogl-077201	Oryza glaberrima	28.93	2.00e-13	70.10
IUUC-Ogu-078056	Oryza glumaepatula	28.93	3.00e-13	70.10
IUUC-Oin-080062	Oryza indica	28.93	2.00e-13	70.50
IUUC-Olo-080869	Oryza longistaminata	28.57	2.00e-13	71.60
IUUC-Ome-081820	Oryza meridionalis	28.57	1.00e-13	71.20
IUUC-Oni-082497	Oryza nivara	22.69	5.00e-14	72.40
IUUC-Opu-083780	Oryza punctata	36.36	8.00e-12	66.20
IUUC-Oru-085091	Oryza rufipogon	28.93	2.00e-13	70.10
IUUC-Osa-085725	Oryza sativa	28.93	2.00e-13	70.10
IUUC-Ola-087033	Oryzias latipes	57.83	4.00e-136	478.00
IUUC-Oga-088861	Otolemur garnettii	83.00	0.00e+00	787.00
IUUC-Oar-090048	Ovis aries	95.58	0.00e+00	887.00
IUUC-Ptr-091658	Pan troglodytes	86.18	0.00e+00	794.00
IUUC-Pan-092873	Papio anubis	80.87	0.00e+00	797.00
IUUC-Psi-093421	Pelodiscus sinensis	68.64	1.00e-171	595.00
IUUC-Pma-094216	Petromyzon marinus	42.82	2.00e-90	326.00
IUUC-Ppa-095186	Physcomitrella patens	46.27	4.00e-10	59.70
IUUC-Pfo-096178	Poecilia formosa	57.89	3.00e-140	491.00
IUUC-Pab-098037	Pongo abelii	73.42	8.00e-171	592.00
IUUC-Pop-099334	Populus trichocarpa	31.06	1.00e-15	76.60
IUUC-Pca-100845	Procavia capensis	71.22	0.00e+00	686.00
IUUC-Pva-103203	Pteropus vampyrus	84.14	0.00e+00	833.00
IUUC-Rno-105675	Rattus norvegicus	79.83	0.00e+00	732.00
IUUC-Sha-107389	Sarcophilus harrisii	68.61	0.00e+00	642.00
IUUC-Spo-108190	Schizosaccharomyces pombe	26.14	3.00e-06	46.60
IUUC-Sit-110421	Setaria italica	41.58	2.00e-14	73.60
IUUC-Sly-110888	Solanum lycopersicum	22.89	2.00e-13	70.10
IUUC-Sar-113185	Sorex araneus	65.89	2.00e-159	555.00
IUUC-Sbi-114182	Sorghum bicolor	43.42	4.00e-14	71.20
IUUC-Ssc-116005	Sus scrofa	88.77	0.00e+00	863.00
IUUC-Tgu-117023	Taeniopygia guttata	66.07	7.00e-163	566.00
IUUC-Tru-118221	Takifugu rubripes	58.62	9.00e-147	513.00
IUUC-Tsy-118784	Tarsius syrichta	73.16	2.00e-175	608.00
IUUC-Tni-120072	Tetraodon nigroviridis	58.53	1.00e-147	516.00
IUUC-Tca-121267	Theobroma cacao	25.37	3.00e-16	79.70
IUUC-Tae-124900	Triticum aestivum	30.82	1.00e-14	73.60
IUUC-Tur-126655	Triticum urartu	30.82	1.00e-14	73.90
IUUC-Tbe-127243	Tupaia belangeri	72.20	0.00e+00	668.00
IUUC-Ttr-129237	Tursiops truncatus	93.63	0.00e+00	733.00
IUUC-Vvi-131184	Vitis vinifera	26.35	1.00e-10	61.60
IUUC-Xtr-132006	Xenopus tropicalis	47.49	3.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence