iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cfa-020441

Ensembl Protein ID

ENSCAFP00000024695.3

UniProt Accession

F6V6S2; F6V6S2_CANLF

Genbank Protein ID

ENSCAFP00000024695

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03005832

Gene Name

DCAF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000016792.3	ENSCAFT00000026589.3	ENSCAFP00000024695.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-06	27.4	369	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           H + vt+++  ++  +l++s    gtik+WDlrt ++++
   Q: 369  HDSAVTSVQIlQEeqNLMAS-DMAGTIKLWDLRTTKCIR 406
           9999*****98554355555.5669**********9987 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MYKNNWQNRR RGRRSHQQNS RLRQHGSDER CNSVAEQSPQ DSGPISDDES PSTSSGSAGS 60
SSVPDLPGFY FDPEKKRYFR LLPGHNNCNP LTKESIRQKE MESKRLQLLE EEDKQKKKIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTGGAGAG CGTCTGCTGA AAGTAATCCA AGTTGTGGAA TGGCCCAGTA GGGGAGGCAG 60
ACTGTCTGAA GCAAGCAAAC TGAGGACTTT GTTACAGAAT TCACAAAATG TTTGGGTAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0008380--P:RNA splicing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001176	Aegilops tauschii	41.49	1.00e-12	66.20
IUUC-Aml-001929	Ailuropoda melanoleuca	95.16	0.00e+00	919.00
IUUC-Atr-002556	Amborella trichopoda	28.82	6.00e-13	68.90
IUUC-Apl-003177	Anas platyrhynchos	73.10	0.00e+00	629.00
IUUC-Aca-004610	Anolis carolinensis	62.65	2.00e-180	625.00
IUUC-Aly-005883	Arabidopsis lyrata	25.11	7.00e-15	75.50
IUUC-Ath-006668	Arabidopsis thaliana	23.32	1.00e-16	81.30
IUUC-Afl-008573	Aspergillus flavus	22.83	4.00e-05	42.70
IUUC-Ate-010340	Aspergillus terreus	22.91	9.00e-10	58.20
IUUC-Ame-010690	Astyanax mexicanus	64.35	1.00e-157	549.00
IUUC-Bta-012668	Bos taurus	84.43	0.00e+00	773.00
IUUC-Bdi-014848	Brachypodium distachyon	31.97	9.00e-13	68.20
IUUC-Bol-016035	Brassica oleracea	32.92	3.00e-14	73.20
IUUC-Bra-016687	Brassica rapa	31.68	4.00e-13	69.70
IUUC-Cja-019560	Callithrix jacchus	83.65	8.00e-78	282.00
IUUC-Cpo-021299	Cavia porcellus	78.67	0.00e+00	785.00
IUUC-Csa-023185	Chlorocebus sabaeus	90.89	0.00e+00	823.00
IUUC-Cho-024353	Choloepus hoffmanni	82.49	0.00e+00	789.00
IUUC-Dno-029890	Dasypus novemcinctus	81.76	0.00e+00	749.00
IUUC-Dor-030618	Dipodomys ordii	92.31	4.00e-89	322.00
IUUC-Ete-032557	Echinops telfairi	71.55	3.00e-132	464.00
IUUC-Eca-033466	Equus caballus	88.87	0.00e+00	897.00
IUUC-Eeu-034995	Erinaceus europaeus	77.14	8.00e-153	533.00
IUUC-Fca-036199	Felis catus	96.20	0.00e+00	892.00
IUUC-Fal-036717	Ficedula albicollis	67.14	5.00e-179	620.00
IUUC-Gmo-039201	Gadus morhua	60.51	1.00e-153	536.00
IUUC-Gga-040398	Gallus gallus	73.55	1.00e-168	586.00
IUUC-Gac-042391	Gasterosteus aculeatus	61.20	5.00e-161	560.00
IUUC-Gma-042906	Glycine max	27.04	9.00e-10	58.50
IUUC-Ggo-045348	Gorilla gorilla	88.96	0.00e+00	823.00
IUUC-Hsa-046746	Homo sapiens	89.18	0.00e+00	827.00
IUUC-Hvu-047825	Hordeum vulgare	33.33	2.00e-14	73.60
IUUC-Itr-048472	Ictidomys tridecemlineatus	84.91	0.00e+00	817.00
IUUC-Lch-050272	Latimeria chalumnae	57.00	2.00e-147	516.00
IUUC-Lpe-051618	Leersia perrieri	28.95	6.00e-12	65.90
IUUC-Loc-051772	Lepisosteus oculatus	58.52	5.00e-167	580.00
IUUC-Laf-054577	Loxodonta africana	73.04	0.00e+00	662.00
IUUC-Mcc-055284	Macaca mulatta	91.51	1.00e-175	609.00
IUUC-Meu-056721	Macropus eugenii	64.18	2.00e-91	328.00
IUUC-Mtr-058472	Medicago truncatula	28.48	3.00e-12	66.60
IUUC-Mga-059238	Meleagris gallopavo	73.39	4.00e-168	584.00
IUUC-Mmr-061642	Microcebus murinus	93.37	0.00e+00	733.00
IUUC-Mdo-062030	Monodelphis domestica	70.41	0.00e+00	647.00
IUUC-Mmu-063420	Mus musculus	80.08	0.00e+00	796.00
IUUC-Mac-065231	Musa acuminata	33.58	9.00e-16	78.60
IUUC-Mpu-065692	Mustela putorius furo	95.56	0.00e+00	914.00
IUUC-Mlu-067428	Myotis lucifugus	85.08	0.00e+00	829.00
IUUC-Nle-070145	Nomascus leucogenys	87.45	0.00e+00	832.00
IUUC-Opr-071081	Ochotona princeps	78.02	0.00e+00	738.00
IUUC-Ont-071302	Oreochromis niloticus	62.27	9.00e-157	546.00
IUUC-Oan-073494	Ornithorhynchus anatinus	55.94	1.00e-131	463.00
IUUC-Ocu-073925	Oryctolagus cuniculus	79.56	0.00e+00	786.00
IUUC-Oba-075797	Oryza barthii	29.61	5.00e-12	65.90
IUUC-Obr-076014	Oryza brachyantha	30.92	3.00e-13	70.10
IUUC-Ogl-077201	Oryza glaberrima	29.61	6.00e-12	65.50
IUUC-Ogu-078056	Oryza glumaepatula	29.61	6.00e-12	65.50
IUUC-Oin-080062	Oryza indica	29.61	5.00e-12	65.90
IUUC-Olo-080869	Oryza longistaminata	29.61	4.00e-12	67.40
IUUC-Ome-081820	Oryza meridionalis	29.61	2.00e-12	67.00
IUUC-Oni-082497	Oryza nivara	29.61	5.00e-12	65.90
IUUC-Opu-083780	Oryza punctata	37.63	2.00e-10	61.20
IUUC-Oru-085091	Oryza rufipogon	29.61	5.00e-12	65.90
IUUC-Osa-085725	Oryza sativa	29.61	5.00e-12	65.90
IUUC-Ola-087033	Oryzias latipes	60.51	5.00e-142	497.00
IUUC-Oga-088861	Otolemur garnettii	85.77	0.00e+00	813.00
IUUC-Oar-090048	Ovis aries	84.71	0.00e+00	804.00
IUUC-Ptr-091658	Pan troglodytes	88.74	0.00e+00	822.00
IUUC-Pan-092873	Papio anubis	86.40	0.00e+00	823.00
IUUC-Psi-093421	Pelodiscus sinensis	71.53	8.00e-178	616.00
IUUC-Pma-094216	Petromyzon marinus	43.61	5.00e-91	328.00
IUUC-Ppa-095186	Physcomitrella patens	43.28	1.00e-08	54.70
IUUC-Pfo-096178	Poecilia formosa	60.09	4.00e-145	508.00
IUUC-Pab-098037	Pongo abelii	76.20	1.00e-174	605.00
IUUC-Pop-099334	Populus trichocarpa	31.68	5.00e-14	70.90
IUUC-Pca-100845	Procavia capensis	72.00	0.00e+00	680.00
IUUC-Pva-103203	Pteropus vampyrus	88.69	0.00e+00	880.00
IUUC-Rno-105675	Rattus norvegicus	82.46	0.00e+00	759.00
IUUC-Sha-107389	Sarcophilus harrisii	68.60	0.00e+00	659.00
IUUC-Spo-108190	Schizosaccharomyces pombe	27.33	6.00e-08	52.00
IUUC-Sit-110421	Setaria italica	39.50	1.00e-13	70.50
IUUC-Sly-110888	Solanum lycopersicum	25.26	1.00e-08	55.10
IUUC-Sar-113185	Sorex araneus	66.52	8.00e-163	566.00
IUUC-Sbi-114182	Sorghum bicolor	40.79	6.00e-12	63.90
IUUC-Ssc-116005	Sus scrofa	91.40	0.00e+00	860.00
IUUC-Tgu-117023	Taeniopygia guttata	69.75	1.00e-170	592.00
IUUC-Tru-118221	Takifugu rubripes	60.37	2.00e-151	529.00
IUUC-Tsy-118784	Tarsius syrichta	75.19	4.00e-178	617.00
IUUC-Tni-120072	Tetraodon nigroviridis	55.62	1.00e-152	533.00
IUUC-Tca-121267	Theobroma cacao	25.38	7.00e-17	82.00
IUUC-Tae-124900	Triticum aestivum	32.68	1.00e-14	73.20
IUUC-Tur-126655	Triticum urartu	32.68	2.00e-14	73.20
IUUC-Tbe-127243	Tupaia belangeri	76.41	0.00e+00	717.00
IUUC-Ttr-129237	Tursiops truncatus	95.74	0.00e+00	753.00
IUUC-Vvi-131184	Vitis vinifera	26.95	2.00e-09	57.00
IUUC-Xtr-132006	Xenopus tropicalis	49.32	7.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence