iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005735

Ensembl Protein ID

fgenesh2_kg.5__422__AT3G26640.1

UniProt Accession

D7LR76; D7LR76_ARALL

Genbank Protein ID

EFH51588.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348717

Gene Name

LWD2; ARALYDRAFT_484430

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__422__AT3G26640.1	fgenesh2_kg.5__422__AT3G26640.1	fgenesh2_kg.5__422__AT3G26640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-17	61.4	177	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 177  HDKEVYDIAWGGvGVFASVSEDGSVRVFDLRD 208
           8899******55699**************987 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVTSSDQIQN GSDEQSKRSE IYTYEAPWQI YAMNWSIRRD KKYRLAITSL IEQYPNRVEI 60
VQLDESNGEI QSDPNLCFEH PYPPTKTSFI PDKECQSPDL LATSSDFLRL WRISDDESRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAAGAAGA CGAAGCAGAG GAATCTAGGG TTTATGCTTT CATTAAAGCA AAGATGGTAA 60
CGAGCAGCGA TCAAATCCAA AATGGTTCCG ATGAGCAATC AAAAAGATCA GAGATTTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043153--P:entrainment of circadian clock by photoperiod
GO:0048573--P:photoperiodism, flowering

KEGG

aly:ARALYDRAFT_484430

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007236	Arabidopsis thaliana	98.27	0.00e+00	702.00
IUUC-Ago-007732	Ashbya gossypii	30.50	3.00e-38	152.00
IUUC-Eca-033668	Equus caballus	53.43	8.00e-101	359.00
IUUC-Pgr-103490	Puccinia graminis	34.64	1.00e-56	213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence