iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099943

Ensembl Protein ID

POPTR_0002s22620.1

UniProt Accession

B9GTC9; B9GTC9_POPTR

Genbank Protein ID

EEE80837.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTR_0002s22620g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s22620	POPTR_0002s22620.1	POPTR_0002s22620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-16	59.5	177	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++v+Dlr+
   Q: 177  HDKEVYDIAWGGvGVFASVSADGSVRVFDLRD 208
           8899******55699**************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGSSDPNQD GSDEQQKRSE IYTYEAPWHI YAMNWSVRRD KKYRLAIASL LEQYPNRVEI 60
VQLDESNGEI RSDPNLSFEH PYPPTKTIFI PDKECQKPDL LATSSDFLRV WRINDEQPRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTACCGGG CAGATAAAAA GAAGCCGATT CCCCTCTCCT CCCCGCTCTA TCCACCACAG 60
ATCTCTGCTG CTCTTCTTTC TTCCCATAAA ACAGACAATG GGAGGTAGCA GCGACCCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0002s22620g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	58.03	2.00e-97	347.00
IUUC-Apl-003746	Anas platyrhynchos	58.03	2.00e-97	347.00
IUUC-Aca-005293	Anolis carolinensis	59.13	4.00e-116	410.00
IUUC-Aly-006500	Arabidopsis lyrata	94.22	0.00e+00	676.00
IUUC-Ath-006739	Arabidopsis thaliana	94.51	0.00e+00	679.00
IUUC-Bta-013199	Bos taurus	59.13	8.00e-116	409.00
IUUC-Bdi-014374	Brachypodium distachyon	70.10	7.00e-151	526.00
IUUC-Bra-017922	Brassica rapa	93.35	0.00e+00	669.00
IUUC-Cel-018487	Caenorhabditis elegans	52.29	5.00e-102	363.00
IUUC-Cja-018736	Callithrix jacchus	59.13	8.00e-116	409.00
IUUC-Cfa-020446	Canis familiaris	59.13	8.00e-116	409.00
IUUC-Cpo-022424	Cavia porcellus	59.13	8.00e-116	409.00
IUUC-Csa-024013	Chlorocebus sabaeus	57.96	8.00e-100	358.00
IUUC-Cho-024507	Choloepus hoffmanni	58.28	1.00e-96	345.00
IUUC-Cin-025620	Ciona intestinalis	59.54	3.00e-117	414.00
IUUC-Csv-026111	Ciona savignyi	59.83	1.00e-117	415.00
IUUC-Dre-027940	Danio rerio	59.13	1.00e-116	412.00
IUUC-Dno-029520	Dasypus novemcinctus	59.13	8.00e-116	409.00
IUUC-Dme-031639	Drosophila melanogaster	57.43	3.00e-114	404.00
IUUC-Eca-033668	Equus caballus	54.73	4.00e-100	357.00
IUUC-Fca-035942	Felis catus	59.13	8.00e-116	409.00
IUUC-Fal-037544	Ficedula albicollis	59.13	8.00e-116	409.00
IUUC-Gmo-038850	Gadus morhua	58.84	6.00e-116	409.00
IUUC-Gga-040439	Gallus gallus	59.13	8.00e-116	409.00
IUUC-Gac-041776	Gasterosteus aculeatus	58.55	1.00e-115	408.00
IUUC-Ggo-044490	Gorilla gorilla	59.13	8.00e-116	409.00
IUUC-Hsa-046015	Homo sapiens	59.13	8.00e-116	409.00
IUUC-Hvu-047667	Hordeum vulgare	70.00	2.00e-150	524.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	59.13	8.00e-116	409.00
IUUC-Lch-049754	Latimeria chalumnae	59.42	1.00e-116	412.00
IUUC-Lpe-050741	Leersia perrieri	71.50	2.00e-153	534.00
IUUC-Loc-052351	Lepisosteus oculatus	58.21	3.00e-113	400.00
IUUC-Laf-054077	Loxodonta africana	59.13	8.00e-116	409.00
IUUC-Mcc-055728	Macaca mulatta	59.13	8.00e-116	409.00
IUUC-Mga-059566	Meleagris gallopavo	58.03	2.00e-97	347.00
IUUC-Mmr-060831	Microcebus murinus	59.13	8.00e-116	409.00
IUUC-Mdo-062612	Monodelphis domestica	59.13	8.00e-116	409.00
IUUC-Mmu-063399	Mus musculus	59.13	8.00e-116	409.00
IUUC-Mac-065226	Musa acuminata	78.19	8.00e-156	542.00
IUUC-Mpu-065951	Mustela putorius furo	59.13	8.00e-116	409.00
IUUC-Mlu-067858	Myotis lucifugus	59.25	6.00e-115	406.00
IUUC-Nle-070059	Nomascus leucogenys	59.13	8.00e-116	409.00
IUUC-Opr-070572	Ochotona princeps	59.48	4.00e-116	410.00
IUUC-Ont-071420	Oreochromis niloticus	57.39	4.00e-112	397.00
IUUC-Ocu-074105	Oryctolagus cuniculus	59.13	8.00e-116	409.00
IUUC-Oba-075409	Oryza barthii	71.61	4.00e-152	530.00
IUUC-Obr-076284	Oryza brachyantha	70.03	1.00e-132	465.00
IUUC-Ogl-076984	Oryza glaberrima	71.61	2.00e-152	531.00
IUUC-Ogu-078283	Oryza glumaepatula	71.35	2.00e-152	531.00
IUUC-Olo-081042	Oryza longistaminata	77.99	1.00e-111	395.00
IUUC-Ome-081174	Oryza meridionalis	71.35	2.00e-152	531.00
IUUC-Oni-082033	Oryza nivara	71.35	2.00e-152	531.00
IUUC-Opu-084034	Oryza punctata	71.73	2.00e-153	534.00
IUUC-Oru-084908	Oryza rufipogon	70.57	4.00e-135	474.00
IUUC-Osa-085678	Oryza sativa	71.35	2.00e-152	531.00
IUUC-Ola-086324	Oryzias latipes	58.84	4.00e-116	410.00
IUUC-Olu-087620	Ostreococcus lucimarinus	75.53	3.00e-152	530.00
IUUC-Oga-088446	Otolemur garnettii	59.13	8.00e-116	409.00
IUUC-Oar-090168	Ovis aries	59.13	8.00e-116	409.00
IUUC-Ptr-090691	Pan troglodytes	59.30	6.00e-116	409.00
IUUC-Pan-092772	Papio anubis	59.13	8.00e-116	409.00
IUUC-Psi-093304	Pelodiscus sinensis	59.85	1.00e-90	325.00
IUUC-Pma-094292	Petromyzon marinus	57.57	2.00e-97	347.00
IUUC-Pfo-097157	Poecilia formosa	58.84	4.00e-116	410.00
IUUC-Pab-097898	Pongo abelii	57.96	1.00e-99	357.00
IUUC-Pca-100404	Procavia capensis	59.48	4.00e-116	410.00
IUUC-Pva-102938	Pteropus vampyrus	52.61	5.00e-58	217.00
IUUC-Pgr-103490	Puccinia graminis	34.10	6.00e-56	211.00
IUUC-Ptt-103946	Puccinia triticina	36.80	1.00e-54	206.00
IUUC-Rno-104961	Rattus norvegicus	59.13	8.00e-116	409.00
IUUC-Sit-110625	Setaria italica	69.57	9.00e-111	392.00
IUUC-Sbi-114474	Sorghum bicolor	69.07	1.00e-148	518.00
IUUC-Ssc-116028	Sus scrofa	59.13	8.00e-116	409.00
IUUC-Tgu-117189	Taeniopygia guttata	59.13	8.00e-116	409.00
IUUC-Tru-117581	Takifugu rubripes	58.84	6.00e-116	409.00
IUUC-Tsy-119425	Tarsius syrichta	45.70	3.00e-65	241.00
IUUC-Tni-120649	Tetraodon nigroviridis	58.55	4.00e-114	403.00
IUUC-Tae-123331	Triticum aestivum	70.36	1.00e-149	521.00
IUUC-Tur-126531	Triticum urartu	72.41	1.00e-153	536.00
IUUC-Tbe-127919	Tupaia belangeri	59.48	4.00e-116	410.00
IUUC-Uma-129362	Ustilago maydis	34.56	8.00e-50	191.00
IUUC-Vpa-130486	Vicugna pacos	35.88	3.00e-43	168.00
IUUC-Xtr-132175	Xenopus tropicalis	59.13	5.00e-116	410.00
IUUC-Xma-134129	Xiphophorus maculatus	58.84	4.00e-116	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence