iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mvi-060485

Ensembl Protein ID

MVLG_00907T0

UniProt Accession

U5H0H5; U5H0H5_USTV1

Genbank Protein ID

KDE08802.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

AEIJ01000079

Gene Name

ERB1; MVLG_00907

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MVLG_00907	MVLG_00907T0	MVLG_00907T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-09	34.9	1263	1295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           ++++++  ++   +v+G+ Dg +++W+   g++
   Q: 1263 RIRSVSIdPTgMWVVTGAEDGEVRLWECAIGRC 1295
           58999999775779************9766655 PP

Organism

Microbotryum violaceum

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MTLPPASTLQ IHAVHVPTTL PDHEAYRSHL HLLRHDPEAV QEIQRYRLVD DSKRALVSRL 60
LPRYVLALQG LDWRQVRFEK GEYARPLAIH PNLPKDFQYS ASHDAEWVIC ASTFGTTEHG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCCTAC CTCCAGCCAG CACATTGCAG ATCCATGCCG TACACGTGCC GACCACATTA 60
CCCGATCACG AGGCGTACCG GTCACACCTG CACCTGCTCC GCCATGACCC GGAAGCCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR008278--4-PPantetheinyl_Trfase_SF
IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR009030--Growth_fac_rcpt_
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01648--ACPS
PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0008897--F:holo-[acyl-carrier-protein] synthase activity
GO:0000287--F:magnesium ion binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.48	1.00e-109	389.00
IUUC-Aml-001507	Ailuropoda melanoleuca	43.28	6.00e-136	476.00
IUUC-Atr-003141	Amborella trichopoda	37.69	1.00e-71	262.00
IUUC-Apl-003545	Anas platyrhynchos	43.95	3.00e-131	460.00
IUUC-Aly-005649	Arabidopsis lyrata	41.34	9.00e-134	469.00
IUUC-Ath-007625	Arabidopsis thaliana	40.80	4.00e-128	450.00
IUUC-Ago-007958	Ashbya gossypii	47.18	2.00e-179	621.00
IUUC-Acl-008344	Aspergillus clavatus	44.15	1.00e-150	525.00
IUUC-Afl-008616	Aspergillus flavus	44.22	8.00e-154	535.00
IUUC-Afu-009083	Aspergillus fumigatus	43.71	8.00e-147	512.00
IUUC-Ani-009365	Aspergillus nidulans	44.91	3.00e-153	534.00
IUUC-Ang-009796	Aspergillus niger	42.96	2.00e-153	534.00
IUUC-Aor-010015	Aspergillus oryzae	44.22	7.00e-154	535.00
IUUC-Ate-010537	Aspergillus terreus	44.77	7.00e-155	539.00
IUUC-Ame-011767	Astyanax mexicanus	56.33	9.00e-77	278.00
IUUC-Bgr-012286	Blumeria graminis	47.36	1.00e-163	568.00
IUUC-Bta-013569	Bos taurus	45.62	6.00e-152	529.00
IUUC-Bci-013820	Botrytis cinerea	46.53	4.00e-154	536.00
IUUC-Bdi-014895	Brachypodium distachyon	42.28	3.00e-135	473.00
IUUC-Bol-016099	Brassica oleracea	41.90	2.00e-135	474.00
IUUC-Bra-017174	Brassica rapa	41.53	2.00e-136	478.00
IUUC-Cel-018201	Caenorhabditis elegans	39.45	5.00e-122	429.00
IUUC-Cja-019009	Callithrix jacchus	42.89	5.00e-86	310.00
IUUC-Cfa-020173	Canis familiaris	42.88	6.00e-141	493.00
IUUC-Cpo-021796	Cavia porcellus	46.09	3.00e-153	533.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	40.16	3.00e-73	268.00
IUUC-Csa-023440	Chlorocebus sabaeus	45.94	5.00e-157	546.00
IUUC-Cin-025782	Ciona intestinalis	42.71	1.00e-149	521.00
IUUC-Csv-026352	Ciona savignyi	43.03	8.00e-148	515.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	41.04	2.00e-121	427.00
IUUC-Cne-027004	Cryptococcus neoformans	50.82	0.00e+00	726.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.59	2.00e-111	394.00
IUUC-Dre-028658	Danio rerio	46.33	4.00e-164	570.00
IUUC-Dno-028883	Dasypus novemcinctus	45.08	1.00e-152	531.00
IUUC-Dor-031031	Dipodomys ordii	45.50	7.00e-155	539.00
IUUC-Dse-031443	Dothistroma septosporum	43.18	7.00e-152	529.00
IUUC-Dme-031786	Drosophila melanogaster	43.51	3.00e-152	530.00
IUUC-Eca-033677	Equus caballus	46.41	3.00e-154	536.00
IUUC-Eeu-035310	Erinaceus europaeus	41.52	2.00e-113	401.00
IUUC-Fca-035888	Felis catus	45.31	6.00e-152	529.00
IUUC-Fal-037438	Ficedula albicollis	44.67	3.00e-121	426.00
IUUC-Fox-037973	Fusarium oxysporum	45.68	4.00e-169	586.00
IUUC-Fso-038187	Fusarium solani	44.98	5.00e-164	569.00
IUUC-Gmo-039114	Gadus morhua	43.26	8.00e-142	495.00
IUUC-Ggr-039746	Gaeumannomyces graminis	46.60	8.00e-167	578.00
IUUC-Gga-040631	Gallus gallus	47.67	5.00e-88	316.00
IUUC-Gac-042582	Gasterosteus aculeatus	44.05	5.00e-152	529.00
IUUC-Gma-044215	Glycine max	43.56	6.00e-135	473.00
IUUC-Ggo-045587	Gorilla gorilla	45.50	5.00e-157	545.00
IUUC-Hsa-046319	Homo sapiens	45.78	5.00e-157	546.00
IUUC-Hvu-047526	Hordeum vulgare	41.99	3.00e-127	447.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	46.80	6.00e-156	542.00
IUUC-Kpa-049221	Komagataella pastoris	44.74	2.00e-168	584.00
IUUC-Lch-049640	Latimeria chalumnae	46.13	2.00e-168	583.00
IUUC-Lpe-051135	Leersia perrieri	40.25	2.00e-118	417.00
IUUC-Loc-051930	Lepisosteus oculatus	46.66	1.00e-169	588.00
IUUC-Lma-053290	Leptosphaeria maculans	45.73	4.00e-161	560.00
IUUC-Laf-053903	Loxodonta africana	41.85	7.00e-126	442.00
IUUC-Mcc-055471	Macaca mulatta	45.94	1.00e-156	545.00
IUUC-Meu-056190	Macropus eugenii	45.57	2.00e-152	531.00
IUUC-Mor-057135	Magnaporthe oryzae	47.42	1.00e-158	551.00
IUUC-Mpo-057475	Magnaporthe poae	45.69	3.00e-155	540.00
IUUC-Mtr-058689	Medicago truncatula	40.43	1.00e-121	428.00
IUUC-Mla-059149	Melampsora laricipopulina	60.59	0.00e+00	848.00
IUUC-Mga-059645	Meleagris gallopavo	44.98	3.00e-54	202.00
IUUC-Mmr-061674	Microcebus murinus	43.41	3.00e-150	523.00
IUUC-Mdo-062973	Monodelphis domestica	46.09	3.00e-159	553.00
IUUC-Mmu-064180	Mus musculus	45.16	1.00e-155	541.00
IUUC-Mac-064535	Musa acuminata	40.26	4.00e-81	294.00
IUUC-Mpu-066406	Mustela putorius furo	47.11	1.00e-157	548.00
IUUC-Mlu-067795	Myotis lucifugus	45.78	3.00e-145	507.00
IUUC-Nfi-068516	Neosartorya fischeri	44.30	6.00e-140	489.00
IUUC-Ncr-068767	Neurospora crassa	48.33	8.00e-154	535.00
IUUC-Opr-071084	Ochotona princeps	42.32	3.00e-52	197.00
IUUC-Ont-071614	Oreochromis niloticus	45.19	1.00e-160	558.00
IUUC-Oba-075980	Oryza barthii	40.97	2.00e-120	424.00
IUUC-Obr-076799	Oryza brachyantha	43.21	2.00e-134	471.00
IUUC-Ogl-077134	Oryza glaberrima	43.06	3.00e-130	457.00
IUUC-Ogu-078655	Oryza glumaepatula	41.65	2.00e-125	441.00
IUUC-Oin-079654	Oryza indica	43.06	2.00e-130	457.00
IUUC-Olo-080706	Oryza longistaminata	40.87	2.00e-120	424.00
IUUC-Ome-081716	Oryza meridionalis	37.09	4.00e-100	357.00
IUUC-Oni-082508	Oryza nivara	40.81	1.00e-120	425.00
IUUC-Opu-083707	Oryza punctata	40.87	1.00e-119	422.00
IUUC-Oru-084453	Oryza rufipogon	40.87	2.00e-120	424.00
IUUC-Osa-085811	Oryza sativa	42.90	6.00e-130	456.00
IUUC-Ola-087361	Oryzias latipes	47.81	4.00e-166	576.00
IUUC-Oga-088015	Otolemur garnettii	45.09	3.00e-157	546.00
IUUC-Oar-090058	Ovis aries	56.63	1.00e-51	196.00
IUUC-Ptr-090631	Pan troglodytes	45.98	3.00e-62	230.00
IUUC-Pan-092306	Papio anubis	45.87	9.00e-156	542.00
IUUC-Pma-094622	Petromyzon marinus	44.65	9.00e-163	565.00
IUUC-Pno-094794	Phaeosphaeria nodorum	43.74	2.00e-155	541.00
IUUC-Ppa-095528	Physcomitrella patens	39.73	9.00e-81	292.00
IUUC-Pfo-096682	Poecilia formosa	46.40	7.00e-166	575.00
IUUC-Pab-097939	Pongo abelii	46.27	7.00e-141	492.00
IUUC-Pop-099043	Populus trichocarpa	44.39	3.00e-127	446.00
IUUC-Pca-100333	Procavia capensis	45.64	5.00e-153	533.00
IUUC-Ppe-102078	Prunus persica	40.19	4.00e-125	440.00
IUUC-Pgr-103525	Puccinia graminis	57.00	0.00e+00	800.00
IUUC-Ptt-103929	Puccinia triticina	57.10	0.00e+00	763.00
IUUC-Pte-104029	Pyrenophora teres	47.73	1.00e-172	598.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	46.23	3.00e-173	600.00
IUUC-Rno-105248	Rattus norvegicus	45.78	2.00e-156	544.00
IUUC-Sce-106381	Saccharomyces cerevisiae	47.79	0.00e+00	627.00
IUUC-Sha-106519	Sarcophilus harrisii	46.58	4.00e-161	559.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	44.20	1.00e-151	528.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.22	8.00e-146	509.00
IUUC-Smo-109604	Selaginella moellendorffii	40.81	7.00e-126	442.00
IUUC-Sit-109742	Setaria italica	42.59	4.00e-138	483.00
IUUC-Sly-110970	Solanum lycopersicum	43.38	5.00e-69	253.00
IUUC-Stu-112593	Solanum tuberosum	43.44	3.00e-137	480.00
IUUC-Sar-113123	Sorex araneus	42.99	2.00e-67	247.00
IUUC-Sbi-113945	Sorghum bicolor	41.59	1.00e-133	468.00
IUUC-Sre-115188	Sporisorium reilianum	48.60	0.00e+00	680.00
IUUC-Ssc-115352	Sus scrofa	45.19	9.00e-155	538.00
IUUC-Tru-117685	Takifugu rubripes	47.00	5.00e-166	576.00
IUUC-Tni-119982	Tetraodon nigroviridis	46.72	1.00e-160	558.00
IUUC-Tca-121664	Theobroma cacao	43.25	3.00e-136	477.00
IUUC-Tre-122229	Trichoderma reesei	46.81	2.00e-145	508.00
IUUC-Tvi-122576	Trichoderma virens	46.47	2.00e-145	507.00
IUUC-Tae-125703	Triticum aestivum	41.74	2.00e-125	441.00
IUUC-Tur-126781	Triticum urartu	38.71	6.00e-107	380.00
IUUC-Tme-127080	Tuber melanosporum	50.15	0.00e+00	637.00
IUUC-Ttr-128514	Tursiops truncatus	40.78	8.00e-92	329.00
IUUC-Uma-129556	Ustilago maydis	48.26	0.00e+00	662.00
IUUC-Vda-129715	Verticillium dahliae	46.09	9.00e-161	558.00
IUUC-Vvi-131211	Vitis vinifera	42.38	3.00e-127	447.00
IUUC-Xma-133883	Xiphophorus maculatus	46.47	3.00e-161	560.00
IUUC-Yli-134438	Yarrowia lipolytica	43.76	7.00e-155	539.00
IUUC-Zma-135341	Zea mays	37.48	3.00e-120	424.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence