iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106519

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01097983

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000000887.1	ENSSHAT00000001004.1	ENSSHAP00000000991.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-20	70.2	289	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+d v+cl+  ++ + l+sGsdD+++++W++ tg++lk+
   Q: 289  GHSDLVRCLSVsPSgHWLASGSDDHSVRLWEVNTGRCLKT 328
           8**********966699********************986 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

EEGGKDKEDI RNTVGNVPLE WYEDFPHIGY DLDGKKIYKP LRSRDELDHF LDKMDDPDYW 60
RTVQDKMTGQ DVKLTDEQVA LVQRLQKGQF GDASYDPYEP AIDFFSGSLM IHPVTNRPAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGAAGGAG GAAAGGACAA GGAGGTGGAG TTTTCAGATC TGGAAACTGT ACAGCATTAA 60
ACGTTGGCTG AAATGAAGTG GGCAGATCCC CAACCCTTGA GGGACAGGAG AGACAGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	42.88	1.00e-127	450.00
IUUC-Aml-001507	Ailuropoda melanoleuca	79.84	0.00e+00	978.00
IUUC-Atr-003141	Amborella trichopoda	42.56	5.00e-90	324.00
IUUC-Apl-003545	Anas platyrhynchos	69.79	0.00e+00	819.00
IUUC-Aly-005649	Arabidopsis lyrata	46.18	3.00e-159	555.00
IUUC-Ath-007625	Arabidopsis thaliana	46.43	1.00e-157	549.00
IUUC-Ago-007958	Ashbya gossypii	43.54	2.00e-163	569.00
IUUC-Acl-008344	Aspergillus clavatus	43.63	1.00e-142	500.00
IUUC-Afl-008616	Aspergillus flavus	42.86	1.00e-144	506.00
IUUC-Afu-009083	Aspergillus fumigatus	44.85	2.00e-142	499.00
IUUC-Ani-009365	Aspergillus nidulans	43.93	1.00e-146	513.00
IUUC-Ang-009796	Aspergillus niger	43.47	3.00e-141	495.00
IUUC-Aor-010015	Aspergillus oryzae	42.86	9.00e-145	507.00
IUUC-Ate-010537	Aspergillus terreus	44.46	2.00e-149	523.00
IUUC-Ame-011767	Astyanax mexicanus	69.92	1.00e-113	402.00
IUUC-Bgr-012286	Blumeria graminis	44.71	4.00e-151	528.00
IUUC-Bta-013569	Bos taurus	83.90	0.00e+00	1044.00
IUUC-Bci-013820	Botrytis cinerea	43.26	2.00e-144	506.00
IUUC-Bdi-014895	Brachypodium distachyon	47.58	2.00e-159	555.00
IUUC-Bol-016099	Brassica oleracea	45.71	3.00e-159	555.00
IUUC-Bra-017174	Brassica rapa	45.54	2.00e-159	556.00
IUUC-Cel-018201	Caenorhabditis elegans	46.87	7.00e-157	547.00
IUUC-Cja-019009	Callithrix jacchus	72.93	0.00e+00	902.00
IUUC-Cfa-020173	Canis familiaris	79.52	0.00e+00	972.00
IUUC-Cpo-021796	Cavia porcellus	83.90	0.00e+00	1034.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	47.25	3.00e-154	538.00
IUUC-Csa-023440	Chlorocebus sabaeus	84.55	0.00e+00	1072.00
IUUC-Cin-025782	Ciona intestinalis	53.41	0.00e+00	730.00
IUUC-Csv-026352	Ciona savignyi	55.48	0.00e+00	729.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	37.89	5.00e-113	401.00
IUUC-Cne-027004	Cryptococcus neoformans	45.34	3.00e-168	585.00
IUUC-Cme-027242	Cyanidioschyzon merolae	40.86	1.00e-127	450.00
IUUC-Dre-028658	Danio rerio	74.19	0.00e+00	980.00
IUUC-Dno-028883	Dasypus novemcinctus	83.81	0.00e+00	1040.00
IUUC-Dor-031031	Dipodomys ordii	81.70	0.00e+00	1052.00
IUUC-Dse-031443	Dothistroma septosporum	40.30	2.00e-143	503.00
IUUC-Dme-031786	Drosophila melanogaster	53.48	0.00e+00	731.00
IUUC-Eca-033677	Equus caballus	84.72	0.00e+00	1050.00
IUUC-Eeu-035310	Erinaceus europaeus	80.16	0.00e+00	849.00
IUUC-Fca-035888	Felis catus	82.31	0.00e+00	1035.00
IUUC-Fal-037438	Ficedula albicollis	68.14	0.00e+00	731.00
IUUC-Fox-037973	Fusarium oxysporum	43.04	8.00e-158	550.00
IUUC-Fso-038187	Fusarium solani	43.19	5.00e-158	551.00
IUUC-Gmo-039114	Gadus morhua	66.50	0.00e+00	838.00
IUUC-Ggr-039746	Gaeumannomyces graminis	42.66	7.00e-157	547.00
IUUC-Gga-040631	Gallus gallus	72.86	6.00e-152	530.00
IUUC-Gac-042582	Gasterosteus aculeatus	67.68	0.00e+00	860.00
IUUC-Gma-044215	Glycine max	46.54	6.00e-152	531.00
IUUC-Ggo-045587	Gorilla gorilla	84.76	0.00e+00	1076.00
IUUC-Hsa-046319	Homo sapiens	84.88	0.00e+00	1076.00
IUUC-Hvu-047526	Hordeum vulgare	46.53	2.00e-150	526.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	83.41	0.00e+00	1045.00
IUUC-Kpa-049221	Komagataella pastoris	43.33	1.00e-155	543.00
IUUC-Lch-049640	Latimeria chalumnae	75.32	0.00e+00	1014.00
IUUC-Lpe-051135	Leersia perrieri	44.10	4.00e-138	484.00
IUUC-Loc-051930	Lepisosteus oculatus	74.68	0.00e+00	991.00
IUUC-Lma-053290	Leptosphaeria maculans	43.17	4.00e-144	505.00
IUUC-Laf-053903	Loxodonta africana	77.92	0.00e+00	939.00
IUUC-Mcc-055471	Macaca mulatta	84.07	0.00e+00	1067.00
IUUC-Meu-056190	Macropus eugenii	95.13	0.00e+00	1164.00
IUUC-Mor-057135	Magnaporthe oryzae	42.75	2.00e-148	519.00
IUUC-Mpo-057475	Magnaporthe poae	41.80	3.00e-145	508.00
IUUC-Mtr-058689	Medicago truncatula	41.15	7.00e-133	467.00
IUUC-Mla-059149	Melampsora laricipopulina	46.35	6.00e-171	593.00
IUUC-Mga-059645	Meleagris gallopavo	63.52	1.00e-94	338.00
IUUC-Mvi-060485	Microbotryum violaceum	46.58	2.00e-149	523.00
IUUC-Mmr-061674	Microcebus murinus	83.09	0.00e+00	1044.00
IUUC-Mdo-062973	Monodelphis domestica	93.50	0.00e+00	1171.00
IUUC-Mmu-064180	Mus musculus	83.09	0.00e+00	1045.00
IUUC-Mac-064535	Musa acuminata	43.15	2.00e-99	356.00
IUUC-Mpu-066406	Mustela putorius furo	84.07	0.00e+00	1061.00
IUUC-Mlu-067795	Myotis lucifugus	84.07	0.00e+00	1013.00
IUUC-Nfi-068516	Neosartorya fischeri	44.70	3.00e-136	479.00
IUUC-Ncr-068767	Neurospora crassa	42.83	4.00e-140	491.00
IUUC-Opr-071084	Ochotona princeps	79.64	2.00e-132	465.00
IUUC-Ont-071614	Oreochromis niloticus	69.14	0.00e+00	914.00
IUUC-Oba-075980	Oryza barthii	44.43	9.00e-138	483.00
IUUC-Obr-076799	Oryza brachyantha	46.29	9.00e-152	530.00
IUUC-Ogl-077134	Oryza glaberrima	46.13	6.00e-147	514.00
IUUC-Ogu-078655	Oryza glumaepatula	44.84	1.00e-141	496.00
IUUC-Oin-079654	Oryza indica	46.13	7.00e-147	514.00
IUUC-Olo-080706	Oryza longistaminata	44.26	5.00e-139	488.00
IUUC-Ome-081716	Oryza meridionalis	42.23	1.00e-127	450.00
IUUC-Oni-082508	Oryza nivara	44.44	9.00e-138	483.00
IUUC-Opu-083707	Oryza punctata	44.10	7.00e-138	484.00
IUUC-Oru-084453	Oryza rufipogon	44.26	5.00e-139	488.00
IUUC-Osa-085811	Oryza sativa	46.13	6.00e-147	514.00
IUUC-Ola-087361	Oryzias latipes	69.59	0.00e+00	911.00
IUUC-Oga-088015	Otolemur garnettii	83.74	0.00e+00	1076.00
IUUC-Oar-090058	Ovis aries	87.50	2.00e-85	309.00
IUUC-Ptr-090631	Pan troglodytes	76.80	1.00e-136	479.00
IUUC-Pan-092306	Papio anubis	84.42	0.00e+00	1068.00
IUUC-Pma-094622	Petromyzon marinus	73.26	0.00e+00	969.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.03	4.00e-134	471.00
IUUC-Ppa-095528	Physcomitrella patens	43.90	5.00e-96	345.00
IUUC-Pfo-096682	Poecilia formosa	68.75	0.00e+00	918.00
IUUC-Pab-097939	Pongo abelii	83.66	0.00e+00	958.00
IUUC-Pop-099043	Populus trichocarpa	45.13	4.00e-140	491.00
IUUC-Pca-100333	Procavia capensis	84.07	0.00e+00	1054.00
IUUC-Ppe-102078	Prunus persica	44.12	2.00e-149	523.00
IUUC-Pgr-103525	Puccinia graminis	47.39	2.00e-162	566.00
IUUC-Ptt-103929	Puccinia triticina	46.45	3.00e-157	549.00
IUUC-Pte-104029	Pyrenophora teres	43.76	1.00e-156	546.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	43.92	6.00e-157	547.00
IUUC-Rno-105248	Rattus norvegicus	82.93	0.00e+00	1045.00
IUUC-Sce-106381	Saccharomyces cerevisiae	42.34	2.00e-158	553.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	40.25	3.00e-138	485.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.16	4.00e-139	488.00
IUUC-Smo-109604	Selaginella moellendorffii	47.19	7.00e-157	547.00
IUUC-Sit-110551	Setaria italica	46.23	1.00e-149	523.00
IUUC-Sly-110970	Solanum lycopersicum	46.55	9.00e-80	290.00
IUUC-Stu-112593	Solanum tuberosum	46.14	5.00e-154	538.00
IUUC-Sar-113123	Sorex araneus	77.14	9.00e-131	459.00
IUUC-Sbi-113945	Sorghum bicolor	45.10	2.00e-151	529.00
IUUC-Sre-115188	Sporisorium reilianum	45.83	7.00e-162	564.00
IUUC-Ssc-115352	Sus scrofa	83.95	0.00e+00	1033.00
IUUC-Tru-117685	Takifugu rubripes	69.94	0.00e+00	929.00
IUUC-Tni-119982	Tetraodon nigroviridis	69.52	0.00e+00	882.00
IUUC-Tca-121664	Theobroma cacao	45.85	8.00e-159	553.00
IUUC-Tre-122229	Trichoderma reesei	43.86	6.00e-139	488.00
IUUC-Tvi-122576	Trichoderma virens	43.96	7.00e-144	504.00
IUUC-Tae-124110	Triticum aestivum	46.44	4.00e-142	498.00
IUUC-Tur-126781	Triticum urartu	43.05	1.00e-123	436.00
IUUC-Tme-127080	Tuber melanosporum	46.33	7.00e-172	597.00
IUUC-Ttr-128514	Tursiops truncatus	79.08	0.00e+00	714.00
IUUC-Uma-129556	Ustilago maydis	44.26	9.00e-154	537.00
IUUC-Vda-129715	Verticillium dahliae	42.97	1.00e-152	533.00
IUUC-Vvi-131211	Vitis vinifera	44.37	1.00e-147	516.00
IUUC-Xma-133883	Xiphophorus maculatus	68.86	0.00e+00	892.00
IUUC-Yli-134438	Yarrowia lipolytica	43.34	4.00e-141	495.00
IUUC-Zma-135341	Zea mays	42.92	1.00e-90	327.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence