iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001096

Ensembl Protein ID

EMT15313

UniProt Accession

N1R383; N1R383_AEGTA

Genbank Protein ID

EMT15313.1

Protein Name

Putative WD repeat-containing protein

Genbank Nucleotide ID

KD541091

Gene Name

F775_30890

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_30890	EMT15313	EMT15313

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-30	104.2	563	594
UBD/Beta-Prp	9.70e-56	189.9	97	392

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dgt+++WD+
   Q: 563  GHTDRITDLCFsEDgKWLISSSMDGTLRIWDI 594
           8**********955699**************5 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           + +h+++v        ++++++++   g i +w ++  k     +  +s  ++++ ++ ++pd+     + gse + +++w++st k v+++kg ++sv++
   Q: 97   FTKHEEKVNMLYL---FGEYILSADIKGDIFIWAFRGAKPsnepVGNISLGDKFTPTCIMHPDTYlnKVIIGSEEGPLQLWNISTKKKVYAFKGWDSSVRC 194
           4455554444444...5*******************988899999***99999**********866789******************************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
           + +sp  d +++G +d  i+v +++ +++l +++ + +g+v+ +++  dg  ll+sG+  +++ +W+l+  +l    +++h++s+ sl f  n + l+s +
   Q: 195  CVSSPALDMVAVGCSDGSIHVHNIRYDEELMSFNHEIRGAVTALSFRTDGqPLLASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSLHFFANEPILMSSA 295
           ***************************************************************************************************** PP
   S: 200  ldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.................ssvisvavlsf 275
            d+++k+w +       + +r   gh+++++++rf  n++ ++s+++D+  r++ + +++  + l++++                 + vi+ ++ ++
   Q: 296  ADNSIKMWIFDnnegDARLLRFRSGHSAPPRCIRFYGNGKSILSAGQDRAFRLFSVVQDQQSRELSQRHvakrakklrvkeeeiklKPVIAFDCAEI 392
           ********9996655455599999******************************9999999999999887777777777766666655555555444 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MRHSLWCPNS LISNACIAAT CQGQTGDRDQ RLGTETFVTV SVGKAFHVSN CAKLTLVLAG 60
PQLPKKIRAL ASFKEYTFAA YGSDIAVFKR TDLVVTFTKH EEKVNMLYLF GEYILSADIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGGCATT CCCTTTGGTG TCCGAACTCT CTGATATCAA ACGCTTGCAT TGCGGCCACG 60
TGCCAGGGGC AGACAGGTGA CCGGGACCAG GTCCAGGGTC TGCCCGGGTA GTATTTGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR002469--Peptidase_S9B_N
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

ats:F775_30890

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002289	Ailuropoda melanoleuca	36.81	2.00e-142	499.00
IUUC-Atr-002859	Amborella trichopoda	64.22	0.00e+00	1061.00
IUUC-Apl-003505	Anas platyrhynchos	37.35	2.00e-138	485.00
IUUC-Aca-004339	Anolis carolinensis	35.96	3.00e-143	502.00
IUUC-Aly-005913	Arabidopsis lyrata	67.66	0.00e+00	1150.00
IUUC-Ath-006767	Arabidopsis thaliana	67.63	0.00e+00	1155.00
IUUC-Ago-007763	Ashbya gossypii	30.59	8.00e-107	381.00
IUUC-Acl-008275	Aspergillus clavatus	29.95	4.00e-81	295.00
IUUC-Afl-008457	Aspergillus flavus	30.53	1.00e-72	267.00
IUUC-Afu-008914	Aspergillus fumigatus	29.13	9.00e-81	294.00
IUUC-Ani-009225	Aspergillus nidulans	30.16	2.00e-82	299.00
IUUC-Aor-010046	Aspergillus oryzae	29.02	6.00e-93	335.00
IUUC-Ate-010337	Aspergillus terreus	28.32	1.00e-87	317.00
IUUC-Ame-010963	Astyanax mexicanus	36.74	7.00e-138	484.00
IUUC-Bgr-011973	Blumeria graminis	28.36	2.00e-93	336.00
IUUC-Bta-012462	Bos taurus	37.56	6.00e-142	497.00
IUUC-Bci-013940	Botrytis cinerea	29.64	9.00e-110	390.00
IUUC-Bdi-014725	Brachypodium distachyon	91.86	0.00e+00	1578.00
IUUC-Bol-016534	Brassica oleracea	67.86	0.00e+00	1165.00
IUUC-Bra-016781	Brassica rapa	65.90	0.00e+00	1135.00
IUUC-Cel-018581	Caenorhabditis elegans	27.51	1.00e-77	284.00
IUUC-Cja-019675	Callithrix jacchus	36.82	3.00e-149	521.00
IUUC-Cfa-020118	Canis familiaris	37.34	1.00e-143	503.00
IUUC-Cpo-021798	Cavia porcellus	36.95	4.00e-143	501.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	31.77	2.00e-38	153.00
IUUC-Csa-023547	Chlorocebus sabaeus	36.14	2.00e-141	495.00
IUUC-Cho-024518	Choloepus hoffmanni	31.63	2.00e-97	349.00
IUUC-Cin-025339	Ciona intestinalis	34.05	1.00e-143	503.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.64	1.00e-92	333.00
IUUC-Cne-026859	Cryptococcus neoformans	34.94	1.00e-137	483.00
IUUC-Cme-027173	Cyanidioschyzon merolae	29.08	4.00e-81	295.00
IUUC-Dre-027733	Danio rerio	36.15	3.00e-138	485.00
IUUC-Dno-029439	Dasypus novemcinctus	37.12	7.00e-139	487.00
IUUC-Dor-030329	Dipodomys ordii	35.57	2.00e-59	223.00
IUUC-Dse-031511	Dothistroma septosporum	28.47	5.00e-89	322.00
IUUC-Dme-031694	Drosophila melanogaster	32.32	2.00e-123	436.00
IUUC-Ete-032930	Echinops telfairi	38.65	2.00e-110	393.00
IUUC-Eca-033302	Equus caballus	36.89	2.00e-140	493.00
IUUC-Eeu-034516	Erinaceus europaeus	36.67	6.00e-151	527.00
IUUC-Fca-036064	Felis catus	37.01	3.00e-142	498.00
IUUC-Fal-037024	Ficedula albicollis	37.15	3.00e-142	498.00
IUUC-Fox-037787	Fusarium oxysporum	29.57	1.00e-89	323.00
IUUC-Fso-038378	Fusarium solani	29.06	1.00e-90	327.00
IUUC-Gmo-039637	Gadus morhua	36.02	8.00e-83	300.00
IUUC-Ggr-040108	Gaeumannomyces graminis	28.61	7.00e-85	308.00
IUUC-Gga-040982	Gallus gallus	35.71	3.00e-152	531.00
IUUC-Gac-041565	Gasterosteus aculeatus	36.61	7.00e-133	467.00
IUUC-Gma-043185	Glycine max	71.03	0.00e+00	1229.00
IUUC-Ggo-045463	Gorilla gorilla	36.17	9.00e-140	490.00
IUUC-Hsa-045675	Homo sapiens	36.26	9.00e-142	497.00
IUUC-Hvu-047352	Hordeum vulgare	97.71	0.00e+00	1539.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	36.34	2.00e-150	526.00
IUUC-Kpa-049164	Komagataella pastoris	30.72	1.00e-108	387.00
IUUC-Lch-050476	Latimeria chalumnae	35.48	3.00e-147	514.00
IUUC-Lpe-051556	Leersia perrieri	69.49	0.00e+00	1102.00
IUUC-Loc-052820	Lepisosteus oculatus	37.56	2.00e-147	515.00
IUUC-Lma-052961	Leptosphaeria maculans	29.93	1.00e-87	317.00
IUUC-Laf-054006	Loxodonta africana	36.27	6.00e-134	471.00
IUUC-Mcc-055037	Macaca mulatta	36.06	1.00e-140	493.00
IUUC-Mor-057280	Magnaporthe oryzae	27.39	2.00e-84	306.00
IUUC-Mpo-057408	Magnaporthe poae	28.54	2.00e-81	297.00
IUUC-Mtr-058473	Medicago truncatula	72.06	0.00e+00	1254.00
IUUC-Mla-058892	Melampsora laricipopulina	33.94	1.00e-111	397.00
IUUC-Mga-059598	Meleagris gallopavo	31.58	3.00e-106	379.00
IUUC-Mvi-060334	Microbotryum violaceum	34.68	5.00e-117	415.00
IUUC-Mmr-061239	Microcebus murinus	36.23	7.00e-139	487.00
IUUC-Mdo-062471	Monodelphis domestica	37.10	1.00e-139	489.00
IUUC-Mmu-063872	Mus musculus	36.73	2.00e-150	525.00
IUUC-Mac-064631	Musa acuminata	73.93	0.00e+00	1191.00
IUUC-Mpu-066039	Mustela putorius furo	37.26	3.00e-153	535.00
IUUC-Mlu-067485	Myotis lucifugus	36.92	2.00e-140	492.00
IUUC-Nfi-068319	Neosartorya fischeri	28.87	3.00e-90	325.00
IUUC-Ncr-068725	Neurospora crassa	29.00	4.00e-91	329.00
IUUC-Nle-069050	Nomascus leucogenys	36.51	3.00e-142	498.00
IUUC-Opr-070437	Ochotona princeps	39.81	3.00e-46	179.00
IUUC-Ont-071574	Oreochromis niloticus	37.08	3.00e-146	511.00
IUUC-Oan-072826	Ornithorhynchus anatinus	38.12	6.00e-154	537.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.35	6.00e-139	487.00
IUUC-Oba-075407	Oryza barthii	73.95	0.00e+00	1188.00
IUUC-Obr-076451	Oryza brachyantha	87.22	0.00e+00	1530.00
IUUC-Ogl-077535	Oryza glaberrima	86.94	0.00e+00	1501.00
IUUC-Ogu-077995	Oryza glumaepatula	73.52	0.00e+00	1196.00
IUUC-Oin-079431	Oryza indica	87.44	0.00e+00	1510.00
IUUC-Olo-080495	Oryza longistaminata	75.58	0.00e+00	1221.00
IUUC-Oni-082336	Oryza nivara	83.51	0.00e+00	1408.00
IUUC-Opu-084028	Oryza punctata	73.58	0.00e+00	1240.00
IUUC-Oru-084500	Oryza rufipogon	72.88	0.00e+00	1183.00
IUUC-Osa-086242	Oryza sativa	87.56	0.00e+00	1512.00
IUUC-Ola-086612	Oryzias latipes	36.90	2.00e-116	412.00
IUUC-Olu-087703	Ostreococcus lucimarinus	36.14	9.00e-147	513.00
IUUC-Oga-088572	Otolemur garnettii	36.10	7.00e-140	490.00
IUUC-Oar-090363	Ovis aries	38.54	1.00e-145	509.00
IUUC-Ptr-090477	Pan troglodytes	36.14	7.00e-140	490.00
IUUC-Pan-092914	Papio anubis	36.01	6.00e-141	494.00
IUUC-Psi-093019	Pelodiscus sinensis	35.38	2.00e-137	482.00
IUUC-Pma-094303	Petromyzon marinus	35.92	2.00e-120	426.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.76	1.00e-79	291.00
IUUC-Ppa-095720	Physcomitrella patens	52.63	0.00e+00	922.00
IUUC-Pfo-097034	Poecilia formosa	36.19	8.00e-135	473.00
IUUC-Pab-097669	Pongo abelii	36.39	9.00e-143	500.00
IUUC-Pop-098835	Populus trichocarpa	72.41	0.00e+00	1242.00
IUUC-Pca-101097	Procavia capensis	39.33	2.00e-59	223.00
IUUC-Ppe-101430	Prunus persica	72.42	0.00e+00	1257.00
IUUC-Pva-103152	Pteropus vampyrus	37.14	5.00e-144	504.00
IUUC-Pgr-103517	Puccinia graminis	30.72	7.00e-125	441.00
IUUC-Ptt-103697	Puccinia triticina	31.61	1.00e-98	353.00
IUUC-Pte-104121	Pyrenophora teres	29.71	8.00e-89	321.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	29.05	8.00e-89	321.00
IUUC-Rno-105435	Rattus norvegicus	36.36	7.00e-147	514.00
IUUC-Sce-106202	Saccharomyces cerevisiae	29.99	4.00e-94	338.00
IUUC-Sha-107272	Sarcophilus harrisii	38.75	4.00e-138	484.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	34.86	1.00e-142	500.00
IUUC-Spo-108256	Schizosaccharomyces pombe	36.18	7.00e-148	517.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.27	2.00e-105	376.00
IUUC-Smo-109445	Selaginella moellendorffii	53.92	0.00e+00	920.00
IUUC-Sit-110051	Setaria italica	88.62	0.00e+00	1507.00
IUUC-Sly-111181	Solanum lycopersicum	69.40	0.00e+00	1185.00
IUUC-Stu-112018	Solanum tuberosum	69.75	0.00e+00	1194.00
IUUC-Sar-113348	Sorex araneus	36.84	1.00e-99	357.00
IUUC-Sbi-114282	Sorghum bicolor	86.64	0.00e+00	1525.00
IUUC-Sre-114946	Sporisorium reilianum	32.57	4.00e-80	292.00
IUUC-Ssc-115287	Sus scrofa	37.66	3.00e-143	502.00
IUUC-Tgu-117138	Taeniopygia guttata	35.74	1.00e-120	426.00
IUUC-Tru-118232	Takifugu rubripes	36.41	4.00e-142	498.00
IUUC-Tsy-119502	Tarsius syrichta	30.12	3.00e-94	339.00
IUUC-Tni-120378	Tetraodon nigroviridis	37.29	1.00e-143	503.00
IUUC-Tca-121506	Theobroma cacao	69.78	0.00e+00	1184.00
IUUC-Tre-122166	Trichoderma reesei	29.14	2.00e-99	356.00
IUUC-Tvi-122385	Trichoderma virens	29.42	2.00e-100	360.00
IUUC-Tae-122836	Triticum aestivum	96.38	0.00e+00	1724.00
IUUC-Tur-126490	Triticum urartu	85.80	0.00e+00	1441.00
IUUC-Tme-127157	Tuber melanosporum	30.36	7.00e-102	364.00
IUUC-Tbe-127981	Tupaia belangeri	37.89	7.00e-129	454.00
IUUC-Ttr-128886	Tursiops truncatus	36.66	2.00e-139	489.00
IUUC-Uma-129439	Ustilago maydis	33.18	2.00e-87	316.00
IUUC-Vda-129760	Verticillium dahliae	29.42	2.00e-99	356.00
IUUC-Vpa-130456	Vicugna pacos	37.12	8.00e-142	497.00
IUUC-Vvi-131086	Vitis vinifera	70.95	0.00e+00	1256.00
IUUC-Xtr-131829	Xenopus tropicalis	37.09	1.00e-156	546.00
IUUC-Xma-133588	Xiphophorus maculatus	34.88	1.00e-131	463.00
IUUC-Yli-134328	Yarrowia lipolytica	31.61	5.00e-99	355.00
IUUC-Zma-135808	Zea mays	85.07	0.00e+00	1503.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence