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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007622
UUCD1 version UUC-ArT-01721
Ensembl Protein ID AT4G39370.3
UniProt Accession Q9FPS0; Q3E9N3; Q9SVC0; UBP27_ARATH
Genbank Protein ID AAG42765.1; CAB52824.1; CAB80600.1; AEE87061.1; AEE87062.1; AAK44023.1; AAM91704.1
Protein Name Ubiquitin carboxyl-terminal hydrolase 27; Deubiquitinating enzyme 27; Ubiquitin thioesterase 27; Ubiquitin-specific-processing protease 27
Genbank Nucleotide ID AF302675; AL078620; AL161595; CP002687; CP002687; AF370208; AY133770
Gene Name UBP27; At4g39370; F23K16.5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G39370 AT4G39370.2 AT4G39370.2
AT4G39370 AT4G39370.3 AT4G39370.3
AT4G39370 AT4G39370.1 AT4G39370.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 3.30e-49 168.8 75 504
Active Site
Position(s) Description Evidence
83 Nucleophile ECO:0000255|PROSITE-ProRule:PRU10092}
440 Proton acceptor ECO:0000255|PROSITE-ProRule:PRU10092}
Domain Profile

   DUB/USP
   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle...kkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqE 94
           Gl+NlgN C++N +LQ+L++++++r++l       + +l+ e  +e++ +l+ +l  l++el    s++++ +pr+++ +l ++a++f+ ++qqDa E
   Q: 75   GLQNLGNNCFLNVILQALASCKDFRSFLQWvleDARGSLAGE--QEEQLPLTFALSALLQELGtvGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAE 170
           9************************98877643444455544..78999*************88899999**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsde...............aeekkkkknkslisdlFqgqlksqikclecdnvs.sreepfldlslpv 176
            l +l+++l+ee+       +   + +++s+lsd+               +   + k+ ++ +   F+g l s+++c +c ++   +++ f +l+l+ 
   Q: 171  ALLHLISSLQEEI-------VVCYRPSQSSNLSDIlfsrnlrmlapseglHGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQIsLEFQFFHTLPLSP 261
           *************.......5566666667777777788899999999998899999999********************987648888888888853 PP
   S: 177  p....gkeetkkeslqdcLesftkeeelegenkyycekck.............................................kkqeaekklklkk 225
                g + ++  +l++cL++f ++e++e+   y+c +c                                              +++   k+l + +
   Q: 262  LlhhgGYNIMSGCTLEHCLKKFLNTEKVEN---YFCYRCWhgaalkylsvigaaeteieklrscggedqcdcktslhlqrmpwsnSYSHILKQLIIAR 356
           3334444445555***************96...*******88999999999998888888888888888888888877777777777779******** PP
   S: 226  lPe...........vLilhLkRfsfseeqksrekinkkvefpleLdlspfcts..................peekqkekkkYeLiavvvHsGslssGH 294
           +P+            L+++ +R sf+     + k++ ++ fpl L+ls f+ s                  pe  +k++  Y+L+ vv H G ++sGH
   Q: 357  FPKvfayslkldvkLLCIQVQRASFNM--FEEFKLSGHIAFPLVLNLSLFTPSsigvnieeriemsseyqkPEA-SKNHGMYRLVTVVEHFGRTGSGH 451
           ***999999988889999999998876..6888***************99988899999999999998885444.4459******************* PP
   S: 295  Yvayvkn.............ekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           Y++y                e+ +W+ ++Ds+V  v+e++vl    ++a +lfY+r
   Q: 452  YTVYRSVrvfsqeeeeedcdEDLSWFSISDSEVCRVSESDVLG---AEASLLFYER 504
           ****99989998877665555555*******************...********98 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
 Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
Protein Sequence
(Fasta)
MVSRRGSETK AIVCVLTDRI RISNQWVSHL SFAGLLGVAG FVFAQQHGLF RNLNNLKLFS 60
GREKDSGDDS FLVPGLQNLG NNCFLNVILQ ALASCKDFRS FLQWVLEDAR GSLAGEQEEQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007622|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATTCTATGT TTACAAGTTA CAATAGTTAG GAAATTGTAA TTTCAAATCA AATAAGCTAA 60
AAAGATGTTA TTATTAAAAT GTTCAGACGA ATTAAACCGG ACCTAATTTG CTTGGTCTTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007622|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
PROSITE

PS00972--USP_1
PS50235--USP_3
Pfam

PF00443--UCH
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG ath:AT4G39370
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000204 Aegilops tauschii 35.61 9.00e-56 210.00
IUUC-Aml-001733 Ailuropoda melanoleuca 26.82 3.00e-21 96.30
IUUC-Atr-002510 Amborella trichopoda 43.38 5.00e-67 248.00
IUUC-Aly-005754 Arabidopsis lyrata 88.93 0.00e+00 866.00
IUUC-Acl-008136 Aspergillus clavatus 24.50 2.00e-17 84.00
IUUC-Afl-008729 Aspergillus flavus 23.15 3.00e-14 73.20
IUUC-Afu-009119 Aspergillus fumigatus 24.35 4.00e-10 59.30
IUUC-Ani-009286 Aspergillus nidulans 23.16 2.00e-13 70.50
IUUC-Ang-009521 Aspergillus niger 23.28 3.00e-14 72.80
IUUC-Aor-009965 Aspergillus oryzae 23.56 2.00e-15 77.00
IUUC-Ate-010591 Aspergillus terreus 26.64 4.00e-21 95.90
IUUC-Ame-010896 Astyanax mexicanus 26.10 7.00e-24 104.00
IUUC-Bgr-012133 Blumeria graminis 25.48 3.00e-11 63.50
IUUC-Bta-012321 Bos taurus 25.88 1.00e-21 97.10
IUUC-Bci-013590 Botrytis cinerea 25.64 2.00e-20 94.00
IUUC-Bdi-014795 Brachypodium distachyon 35.65 3.00e-40 158.00
IUUC-Bol-015637 Brassica oleracea 72.43 0.00e+00 672.00
IUUC-Bra-016801 Brassica rapa 71.07 0.00e+00 659.00
IUUC-Cja-018826 Callithrix jacchus 27.07 2.00e-24 106.00
IUUC-Cfa-021206 Canis familiaris 27.23 1.00e-22 100.00
IUUC-Cpo-021343 Cavia porcellus 27.29 3.00e-24 106.00
IUUC-Csa-023419 Chlorocebus sabaeus 26.54 3.00e-23 102.00
IUUC-Cho-024475 Choloepus hoffmanni 32.48 1.00e-08 53.50
IUUC-Cgl-026621 Colletotrichum gloeosporioides 24.20 1.00e-10 61.60
IUUC-Cne-027061 Cryptococcus neoformans 22.35 2.00e-10 60.50
IUUC-Dre-027563 Danio rerio 27.39 1.00e-26 113.00
IUUC-Dno-029929 Dasypus novemcinctus 27.21 1.00e-23 103.00
IUUC-Dor-030166 Dipodomys ordii 25.81 1.00e-19 90.50
IUUC-Ete-032634 Echinops telfairi 26.09 4.00e-21 95.50
IUUC-Eca-033968 Equus caballus 27.85 5.00e-24 105.00
IUUC-Fca-036525 Felis catus 27.57 6.00e-24 104.00
IUUC-Fso-038309 Fusarium solani 22.92 1.00e-15 77.40
IUUC-Gmo-038726 Gadus morhua 24.10 2.00e-20 93.20
IUUC-Gga-040718 Gallus gallus 30.96 3.00e-19 89.00
IUUC-Gac-042645 Gasterosteus aculeatus 25.69 4.00e-20 92.00
IUUC-Gma-042890 Glycine max 49.15 1.00e-83 303.00
IUUC-Ggo-045021 Gorilla gorilla 26.54 3.00e-23 102.00
IUUC-Hsa-045832 Homo sapiens 26.54 3.00e-23 102.00
IUUC-Hvu-047422 Hordeum vulgare 44.63 3.00e-23 99.40
IUUC-Itr-048392 Ictidomys tridecemlineatus 27.13 3.00e-23 102.00
IUUC-Lch-050662 Latimeria chalumnae 25.56 4.00e-23 101.00
IUUC-Lpe-051078 Leersia perrieri 37.15 6.00e-74 270.00
IUUC-Loc-052611 Lepisosteus oculatus 28.35 1.00e-23 103.00
IUUC-Lma-053048 Leptosphaeria maculans 24.02 5.00e-18 85.90
IUUC-Laf-053752 Loxodonta africana 26.91 4.00e-23 102.00
IUUC-Mcc-054892 Macaca mulatta 26.54 3.00e-23 102.00
IUUC-Mor-057143 Magnaporthe oryzae 23.97 3.00e-12 66.20
IUUC-Mtr-057976 Medicago truncatula 45.08 2.00e-89 322.00
IUUC-Mla-058970 Melampsora laricipopulina 24.37 2.00e-20 93.60
IUUC-Mga-059543 Meleagris gallopavo 28.29 2.00e-26 112.00
IUUC-Mmr-061534 Microcebus murinus 27.57 2.00e-25 109.00
IUUC-Mmu-063673 Mus musculus 24.74 6.00e-23 101.00
IUUC-Mac-065296 Musa acuminata 41.89 1.00e-37 149.00
IUUC-Mpu-066328 Mustela putorius furo 26.30 5.00e-25 108.00
IUUC-Mlu-067938 Myotis lucifugus 27.57 2.00e-26 113.00
IUUC-Nfi-068306 Neosartorya fischeri 24.45 2.00e-14 73.20
IUUC-Ncr-068741 Neurospora crassa 23.95 7.00e-08 52.00
IUUC-Nle-069426 Nomascus leucogenys 25.11 3.00e-17 82.40
IUUC-Ont-072248 Oreochromis niloticus 26.72 2.00e-21 96.70
IUUC-Oan-072916 Ornithorhynchus anatinus 27.31 3.00e-24 105.00
IUUC-Oba-075765 Oryza barthii 37.01 3.00e-72 265.00
IUUC-Obr-076005 Oryza brachyantha 39.92 3.00e-82 298.00
IUUC-Ogl-077916 Oryza glaberrima 38.88 2.00e-80 292.00
IUUC-Ogu-078263 Oryza glumaepatula 37.01 2.00e-72 266.00
IUUC-Oin-080096 Oryza indica 36.41 8.00e-55 207.00
IUUC-Olo-080702 Oryza longistaminata 33.73 6.00e-31 129.00
IUUC-Ome-081928 Oryza meridionalis 38.20 5.00e-75 274.00
IUUC-Oni-082424 Oryza nivara 37.01 2.00e-71 262.00
IUUC-Opu-083371 Oryza punctata 40.16 5.00e-78 285.00
IUUC-Oru-085117 Oryza rufipogon 37.01 2.00e-71 262.00
IUUC-Ola-087429 Oryzias latipes 27.68 3.00e-22 99.40
IUUC-Oga-087981 Otolemur garnettii 24.14 2.00e-22 100.00
IUUC-Oar-089927 Ovis aries 25.27 5.00e-22 98.60
IUUC-Ptr-090878 Pan troglodytes 26.54 3.00e-23 102.00
IUUC-Pan-092698 Papio anubis 26.54 3.00e-23 102.00
IUUC-Psi-093451 Pelodiscus sinensis 27.69 2.00e-26 113.00
IUUC-Ppa-096015 Physcomitrella patens 31.13 3.00e-34 139.00
IUUC-Pfo-096096 Poecilia formosa 26.57 4.00e-20 92.00
IUUC-Pab-098676 Pongo abelii 26.49 3.00e-23 102.00
IUUC-Pop-099432 Populus trichocarpa 48.78 3.00e-54 204.00
IUUC-Ppe-101898 Prunus persica 51.04 2.00e-90 325.00
IUUC-Pva-103018 Pteropus vampyrus 26.35 4.00e-24 105.00
IUUC-Ptt-103779 Puccinia triticina 23.92 4.00e-11 63.20
IUUC-Pte-104330 Pyrenophora teres 23.47 2.00e-13 70.50
IUUC-Pyt-104518 Pyrenophora triticirepentis 23.30 5.00e-16 79.30
IUUC-Rno-105708 Rattus norvegicus 25.00 2.00e-21 96.70
IUUC-Sce-106365 Saccharomyces cerevisiae 22.73 8.00e-09 54.70
IUUC-Sha-106971 Sarcophilus harrisii 26.57 3.00e-24 105.00
IUUC-Ssl-108648 Sclerotinia sclerotiorum 25.21 7.00e-14 72.00
IUUC-Smo-109191 Selaginella moellendorffii 39.33 6.00e-30 124.00
IUUC-Sit-110442 Setaria italica 42.68 5.00e-80 291.00
IUUC-Sly-110928 Solanum lycopersicum 46.80 3.00e-61 228.00
IUUC-Stu-112223 Solanum tuberosum 47.12 1.00e-58 219.00
IUUC-Sbi-113851 Sorghum bicolor 39.93 7.00e-43 166.00
IUUC-Sre-114910 Sporisorium reilianum 20.63 2.00e-13 70.10
IUUC-Ssc-116397 Sus scrofa 24.14 2.00e-19 89.70
IUUC-Tgu-117446 Taeniopygia guttata 28.32 9.00e-25 107.00
IUUC-Tru-118268 Takifugu rubripes 24.62 2.00e-19 89.70
IUUC-Tni-119735 Tetraodon nigroviridis 26.28 5.00e-13 68.60
IUUC-Tca-121660 Theobroma cacao 50.63 9.00e-97 347.00
IUUC-Tre-122225 Trichoderma reesei 23.21 1.00e-09 58.20
IUUC-Tvi-122277 Trichoderma virens 23.72 4.00e-12 65.90
IUUC-Tae-125383 Triticum aestivum 41.30 2.00e-78 285.00
IUUC-Tur-126458 Triticum urartu 43.26 1.00e-80 293.00
IUUC-Tme-126935 Tuber melanosporum 29.11 7.00e-14 72.00
IUUC-Ttr-129273 Tursiops truncatus 26.97 8.00e-24 104.00
IUUC-Vda-129789 Verticillium dahliae 23.39 1.00e-11 64.70
IUUC-Vvi-131177 Vitis vinifera 49.87 2.00e-91 329.00
IUUC-Xtr-132374 Xenopus tropicalis 27.80 3.00e-29 122.00
IUUC-Xma-133267 Xiphophorus maculatus 26.46 2.00e-23 103.00
IUUC-Yli-134571 Yarrowia lipolytica 23.37 3.00e-15 75.90
Created Date 25-Jun-2017

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